RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 P0C880 135 aa2.82□□□□□ -1.96
SMG6-205ENST00000570659 LCE5AQ5TCM9 118 aa2.82□□□□□ -1.96
SMG6-205ENST00000570659 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
SMG6-205ENST00000570659 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
SMG6-205ENST00000570659 SPATA8Q6RVD6 105 aa2.8□□□□□ -1.96
SMG6-205ENST00000570659 CRIPTQ9P021 101 aa2.8□□□□□ -1.96
SMG6-205ENST00000570659 KRTAP5-3Q6L8H2 238 aa2.78□□□□□ -1.96
SMG6-205ENST00000570659 SPINT4Q6UDR6 99 aa2.77□□□□□ -1.97
SMG6-205ENST00000570659 KRTAP19-7Q3SYF9 63 aa2.76□□□□□ -1.97
SMG6-205ENST00000570659 Q8N9L7 120 aa2.76□□□□□ -1.97
SMG6-205ENST00000570659 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
SMG6-205ENST00000570659 A0A1B0GU69 56 aa2.74□□□□□ -1.97
SMG6-205ENST00000570659 LCE4AQ5TA78 99 aa2.74□□□□□ -1.97
SMG6-205ENST00000570659 MT1EP04732 61 aa2.72□□□□□ -1.97
SMG6-205ENST00000570659 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
SMG6-205ENST00000570659 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
SMG6-205ENST00000570659 PLAC4Q8WY50 150 aa2.72□□□□□ -1.97
SMG6-205ENST00000570659 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
SMG6-205ENST00000570659 A0A1B0GU33 70 aa2.68□□□□□ -1.98
SMG6-205ENST00000570659 H0YAA0 97 aa2.67□□□□□ -1.98
SMG6-205ENST00000570659 KRTAP15-1Q3LI76 137 aa2.66□□□□□ -1.98
SMG6-205ENST00000570659 TP53AIP1Q9HCN2 124 aa2.66□□□□□ -1.98
SMG6-205ENST00000570659 ACYP2P14621 99 aa2.64□□□□□ -1.99
SMG6-205ENST00000570659 MT1MQ8N339 61 aa2.62□□□□□ -1.99
SMG6-205ENST00000570659 LOC100996750A0A140TA64 210 aa2.61□□□□□ -1.99
SMG6-205ENST00000570659 M0QZ58 72 aa2.6□□□□□ -1.99
SMG6-205ENST00000570659 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
SMG6-205ENST00000570659 KRTAP19-4Q3LI73 84 aa2.59□□□□□ -1.99
SMG6-205ENST00000570659 R4GN34 69 aa2.58□□□□□ -2
SMG6-205ENST00000570659 MT1GP13640 62 aa2.56□□□□□ -2
SMG6-205ENST00000570659 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
SMG6-205ENST00000570659 MT1LQ93083 61 aa2.53□□□□□ -2
SMG6-205ENST00000570659 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
SMG6-205ENST00000570659 KRTAP4-7Q9BYR0 210 aa2.51□□□□□ -2.01
SMG6-205ENST00000570659 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
SMG6-205ENST00000570659 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
SMG6-205ENST00000570659 PP632Q6XCG6 107 aa2.45□□□□□ -2.02
SMG6-205ENST00000570659 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
SMG6-205ENST00000570659 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
SMG6-205ENST00000570659 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
SMG6-205ENST00000570659 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
SMG6-205ENST00000570659 INE1O15225 51 aa2.43□□□□□ -2.02
SMG6-205ENST00000570659 SYNE1Q8NF91 8797 aaKnown RBP2.41□□□□□ -2.02
SMG6-205ENST00000570659 KRTAP13-4Q3LI77 160 aa2.4□□□□□ -2.03
SMG6-205ENST00000570659 A0A0D9SG42 100 aa2.39□□□□□ -2.03
SMG6-205ENST00000570659 KRTAP9-9Q9BYP9 154 aa2.34□□□□□ -2.03
SMG6-205ENST00000570659 KRTAP9-4Q9BYQ2 154 aa2.34□□□□□ -2.03
SMG6-205ENST00000570659 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
SMG6-205ENST00000570659 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
SMG6-205ENST00000570659 C10orf95Q9H7T3 257 aa2.32□□□□□ -2.04
SMG6-205ENST00000570659 LCE3AQ5TA76 89 aa2.3□□□□□ -2.04
SMG6-205ENST00000570659 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
SMG6-205ENST00000570659 OBSCNQ5VST9 7968 aa2.19□□□□□ -2.06
SMG6-205ENST00000570659 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
SMG6-205ENST00000570659 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
SMG6-205ENST00000570659 KRTAP12-1P59990 96 aa2.14□□□□□ -2.07
SMG6-205ENST00000570659 KRTAP12-3P60328 96 aa2.13□□□□□ -2.07
SMG6-205ENST00000570659 MT1AP04731 61 aa2.11□□□□□ -2.07
SMG6-205ENST00000570659 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
SMG6-205ENST00000570659 TNP1P09430 55 aa2.02□□□□□ -2.09
SMG6-205ENST00000570659 KRTAP9-6A8MVA2 160 aa2□□□□□ -2.09
SMG6-205ENST00000570659 LCE3CQ5T5A8 94 aa1.93□□□□□ -2.1
SMG6-205ENST00000570659 MT3P25713 68 aa1.88□□□□□ -2.11
SMG6-205ENST00000570659 LCE1BQ5T7P3 118 aa1.82□□□□□ -2.12
SMG6-205ENST00000570659 LCE1EQ5T753 118 aa1.81□□□□□ -2.12
SMG6-205ENST00000570659 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
SMG6-205ENST00000570659 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
SMG6-205ENST00000570659 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SMG6-205ENST00000570659 LCE1FQ5T754 118 aa1.63□□□□□ -2.15
SMG6-205ENST00000570659 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.52□□□□□ -2.17
SMG6-205ENST00000570659 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
SMG6-205ENST00000570659 KRTAP4-4Q9BYR3 166 aa1.45□□□□□ -2.18
SMG6-205ENST00000570659 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
SMG6-205ENST00000570659 LCE3EQ5T5B0 92 aa1.39□□□□□ -2.19
SMG6-205ENST00000570659 PRM1P04553 51 aa1.34□□□□□ -2.19
SMG6-205ENST00000570659 LCE3DQ9BYE3 92 aa1.34□□□□□ -2.19
SMG6-205ENST00000570659 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
SMG6-205ENST00000570659 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 128.5 ms