RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
SF3B3-207ENST00000566095 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
SF3B3-207ENST00000566095 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
SF3B3-207ENST00000566095 KRTAP6-3Q3LI67 103 aa3.85□□□□□ -1.79
SF3B3-207ENST00000566095 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
SF3B3-207ENST00000566095 LCE4AQ5TA78 99 aa3.81□□□□□ -1.8
SF3B3-207ENST00000566095 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
SF3B3-207ENST00000566095 KRTAP19-4Q3LI73 84 aa3.79□□□□□ -1.8
SF3B3-207ENST00000566095 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
SF3B3-207ENST00000566095 KMT2DO14686 5537 aa3.76□□□□□ -1.81
SF3B3-207ENST00000566095 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
SF3B3-207ENST00000566095 LCE5AQ5TCM9 118 aa3.66□□□□□ -1.82
SF3B3-207ENST00000566095 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.83
SF3B3-207ENST00000566095 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.83
SF3B3-207ENST00000566095 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.83
SF3B3-207ENST00000566095 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.83
SF3B3-207ENST00000566095 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
SF3B3-207ENST00000566095 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
SF3B3-207ENST00000566095 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
SF3B3-207ENST00000566095 MT1EP04732 61 aa3.58□□□□□ -1.84
SF3B3-207ENST00000566095 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
SF3B3-207ENST00000566095 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
SF3B3-207ENST00000566095 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
SF3B3-207ENST00000566095 MT1GP13640 62 aa3.5□□□□□ -1.85
SF3B3-207ENST00000566095 SPRR2EP22531 72 aa3.5□□□□□ -1.85
SF3B3-207ENST00000566095 SPRR2BP35325 72 aa3.5□□□□□ -1.85
SF3B3-207ENST00000566095 SPRR2AP35326 72 aa3.5□□□□□ -1.85
SF3B3-207ENST00000566095 MT1LQ93083 61 aa3.49□□□□□ -1.85
SF3B3-207ENST00000566095 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
SF3B3-207ENST00000566095 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
SF3B3-207ENST00000566095 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
SF3B3-207ENST00000566095 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
SF3B3-207ENST00000566095 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
SF3B3-207ENST00000566095 H3BS24 57 aa3.4□□□□□ -1.87
SF3B3-207ENST00000566095 SPRR2DP22532 72 aa3.4□□□□□ -1.87
SF3B3-207ENST00000566095 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.87
SF3B3-207ENST00000566095 MT1MQ8N339 61 aa3.38□□□□□ -1.87
SF3B3-207ENST00000566095 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
SF3B3-207ENST00000566095 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
SF3B3-207ENST00000566095 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
SF3B3-207ENST00000566095 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
SF3B3-207ENST00000566095 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
SF3B3-207ENST00000566095 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
SF3B3-207ENST00000566095 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
SF3B3-207ENST00000566095 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
SF3B3-207ENST00000566095 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
SF3B3-207ENST00000566095 MT1AP04731 61 aa3.01□□□□□ -1.93
SF3B3-207ENST00000566095 A0A0A0MQY5 61 aa3□□□□□ -1.93
SF3B3-207ENST00000566095 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
SF3B3-207ENST00000566095 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
SF3B3-207ENST00000566095 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
SF3B3-207ENST00000566095 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
SF3B3-207ENST00000566095 MT4P47944 62 aa2.88□□□□□ -1.95
SF3B3-207ENST00000566095 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
SF3B3-207ENST00000566095 INE1O15225 51 aa2.87□□□□□ -1.95
SF3B3-207ENST00000566095 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
SF3B3-207ENST00000566095 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
SF3B3-207ENST00000566095 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
SF3B3-207ENST00000566095 MT3P25713 68 aa2.77□□□□□ -1.97
SF3B3-207ENST00000566095 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
SF3B3-207ENST00000566095 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
SF3B3-207ENST00000566095 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
SF3B3-207ENST00000566095 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
SF3B3-207ENST00000566095 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
SF3B3-207ENST00000566095 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
SF3B3-207ENST00000566095 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
SF3B3-207ENST00000566095 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
SF3B3-207ENST00000566095 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
SF3B3-207ENST00000566095 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
SF3B3-207ENST00000566095 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
SF3B3-207ENST00000566095 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
SF3B3-207ENST00000566095 PRM1P04553 51 aa2.13□□□□□ -2.07
SF3B3-207ENST00000566095 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
SF3B3-207ENST00000566095 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
SF3B3-207ENST00000566095 LCE1FQ5T754 118 aa1.9□□□□□ -2.11
SF3B3-207ENST00000566095 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
SF3B3-207ENST00000566095 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
SF3B3-207ENST00000566095 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 7.8 ms