RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 SPINT4Q6UDR6 99 aa4.51□□□□□ -1.69
NSMCE1-211ENST00000566087 SPRR2FQ96RM1 72 aa4.5□□□□□ -1.69
NSMCE1-211ENST00000566087 KRTAP12-2P59991 146 aa4.49□□□□□ -1.69
NSMCE1-211ENST00000566087 PRO0628Q9UI54 55 aa4.48□□□□□ -1.69
NSMCE1-211ENST00000566087 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
NSMCE1-211ENST00000566087 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
NSMCE1-211ENST00000566087 MT1XP80297 61 aa4.43□□□□□ -1.7
NSMCE1-211ENST00000566087 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
NSMCE1-211ENST00000566087 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
NSMCE1-211ENST00000566087 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
NSMCE1-211ENST00000566087 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
NSMCE1-211ENST00000566087 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
NSMCE1-211ENST00000566087 SPRR2DP22532 72 aa4.36□□□□□ -1.71
NSMCE1-211ENST00000566087 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
NSMCE1-211ENST00000566087 ROMO1P60602 79 aa4.29□□□□□ -1.72
NSMCE1-211ENST00000566087 C10orf95Q9H7T3 257 aa4.27□□□□□ -1.73
NSMCE1-211ENST00000566087 KRTAP10-12P60413 245 aa4.25□□□□□ -1.73
NSMCE1-211ENST00000566087 KRTAP10-7P60409 375 aaPredicted RBP4.22□□□□□ -1.73
NSMCE1-211ENST00000566087 TNP1P09430 55 aa4.19□□□□□ -1.74
NSMCE1-211ENST00000566087 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
NSMCE1-211ENST00000566087 DSTQ03001 7570 aaKnown RBP4.17□□□□□ -1.74
NSMCE1-211ENST00000566087 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
NSMCE1-211ENST00000566087 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
NSMCE1-211ENST00000566087 PP632Q6XCG6 107 aa4.04□□□□□ -1.76
NSMCE1-211ENST00000566087 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
NSMCE1-211ENST00000566087 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
NSMCE1-211ENST00000566087 SVIPQ8NHG7 77 aa3.94□□□□□ -1.78
NSMCE1-211ENST00000566087 MT1EP04732 61 aa3.93□□□□□ -1.78
NSMCE1-211ENST00000566087 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
NSMCE1-211ENST00000566087 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
NSMCE1-211ENST00000566087 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.79
NSMCE1-211ENST00000566087 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
NSMCE1-211ENST00000566087 MT1GP13640 62 aa3.88□□□□□ -1.79
NSMCE1-211ENST00000566087 MT4P47944 62 aa3.87□□□□□ -1.79
NSMCE1-211ENST00000566087 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
NSMCE1-211ENST00000566087 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
NSMCE1-211ENST00000566087 MT1LQ93083 61 aa3.78□□□□□ -1.8
NSMCE1-211ENST00000566087 MT3P25713 68 aa3.75□□□□□ -1.81
NSMCE1-211ENST00000566087 A0A0A0MQY5 61 aa3.73□□□□□ -1.81
NSMCE1-211ENST00000566087 MT1MQ8N339 61 aa3.73□□□□□ -1.81
NSMCE1-211ENST00000566087 KRTAP5-7Q6L8G8 165 aa3.68□□□□□ -1.82
NSMCE1-211ENST00000566087 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
NSMCE1-211ENST00000566087 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
NSMCE1-211ENST00000566087 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
NSMCE1-211ENST00000566087 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
NSMCE1-211ENST00000566087 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
NSMCE1-211ENST00000566087 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
NSMCE1-211ENST00000566087 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
NSMCE1-211ENST00000566087 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
NSMCE1-211ENST00000566087 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
NSMCE1-211ENST00000566087 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
NSMCE1-211ENST00000566087 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
NSMCE1-211ENST00000566087 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
NSMCE1-211ENST00000566087 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
NSMCE1-211ENST00000566087 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
NSMCE1-211ENST00000566087 MT1AP04731 61 aa3.24□□□□□ -1.89
NSMCE1-211ENST00000566087 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
NSMCE1-211ENST00000566087 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
NSMCE1-211ENST00000566087 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
NSMCE1-211ENST00000566087 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
NSMCE1-211ENST00000566087 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
NSMCE1-211ENST00000566087 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
NSMCE1-211ENST00000566087 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
NSMCE1-211ENST00000566087 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
NSMCE1-211ENST00000566087 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
NSMCE1-211ENST00000566087 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
NSMCE1-211ENST00000566087 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
NSMCE1-211ENST00000566087 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
NSMCE1-211ENST00000566087 INE1O15225 51 aa2.69□□□□□ -1.98
NSMCE1-211ENST00000566087 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
NSMCE1-211ENST00000566087 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
NSMCE1-211ENST00000566087 LCE1CQ5T751 118 aa2.53□□□□□ -2
NSMCE1-211ENST00000566087 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
NSMCE1-211ENST00000566087 PRM1P04553 51 aa2.23□□□□□ -2.05
NSMCE1-211ENST00000566087 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
NSMCE1-211ENST00000566087 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
NSMCE1-211ENST00000566087 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
NSMCE1-211ENST00000566087 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 109 ms