RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 TNP1P09430 55 aa5.15□□□□□ -1.59
SF3B3-206ENST00000565990 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
SF3B3-206ENST00000565990 A0A0A0MQY5 61 aa5.09□□□□□ -1.59
SF3B3-206ENST00000565990 NDUFAF8A1L188 74 aa5.09□□□□□ -1.59
SF3B3-206ENST00000565990 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
SF3B3-206ENST00000565990 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-206ENST00000565990 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
SF3B3-206ENST00000565990 KMT2DO14686 5537 aa5□□□□□ -1.61
SF3B3-206ENST00000565990 LUZP6Q538Z0 58 aa4.98□□□□□ -1.61
SF3B3-206ENST00000565990 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
SF3B3-206ENST00000565990 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
SF3B3-206ENST00000565990 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
SF3B3-206ENST00000565990 KRTAP8-1Q8IUC2 63 aa4.88□□□□□ -1.63
SF3B3-206ENST00000565990 MUC12Q9UKN1 5478 aa4.82□□□□□ -1.64
SF3B3-206ENST00000565990 SPRR2FQ96RM1 72 aa4.78□□□□□ -1.64
SF3B3-206ENST00000565990 NEBP20929 6669 aa4.76□□□□□ -1.65
SF3B3-206ENST00000565990 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
SF3B3-206ENST00000565990 LCE3AQ5TA76 89 aa4.73□□□□□ -1.65
SF3B3-206ENST00000565990 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
SF3B3-206ENST00000565990 KRTAP19-5Q3LI72 72 aa4.66□□□□□ -1.66
SF3B3-206ENST00000565990 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
SF3B3-206ENST00000565990 MT1EP04732 61 aa4.65□□□□□ -1.67
SF3B3-206ENST00000565990 SPRR2EP22531 72 aa4.62□□□□□ -1.67
SF3B3-206ENST00000565990 SPRR2BP35325 72 aa4.62□□□□□ -1.67
SF3B3-206ENST00000565990 SPRR2AP35326 72 aa4.62□□□□□ -1.67
SF3B3-206ENST00000565990 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
SF3B3-206ENST00000565990 KRTAP19-3Q7Z4W3 81 aa4.54□□□□□ -1.68
SF3B3-206ENST00000565990 MT1GP13640 62 aa4.5□□□□□ -1.69
SF3B3-206ENST00000565990 MT1LQ93083 61 aa4.5□□□□□ -1.69
SF3B3-206ENST00000565990 SPRR2DP22532 72 aa4.47□□□□□ -1.69
SF3B3-206ENST00000565990 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
SF3B3-206ENST00000565990 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
SF3B3-206ENST00000565990 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
SF3B3-206ENST00000565990 INE1O15225 51 aa4.4□□□□□ -1.71
SF3B3-206ENST00000565990 MT1MQ8N339 61 aa4.4□□□□□ -1.71
SF3B3-206ENST00000565990 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
SF3B3-206ENST00000565990 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
SF3B3-206ENST00000565990 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
SF3B3-206ENST00000565990 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
SF3B3-206ENST00000565990 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
SF3B3-206ENST00000565990 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
SF3B3-206ENST00000565990 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
SF3B3-206ENST00000565990 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
SF3B3-206ENST00000565990 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
SF3B3-206ENST00000565990 MT4P47944 62 aa3.87□□□□□ -1.79
SF3B3-206ENST00000565990 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
SF3B3-206ENST00000565990 MT1AP04731 61 aa3.84□□□□□ -1.79
SF3B3-206ENST00000565990 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
SF3B3-206ENST00000565990 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
SF3B3-206ENST00000565990 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
SF3B3-206ENST00000565990 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
SF3B3-206ENST00000565990 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
SF3B3-206ENST00000565990 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
SF3B3-206ENST00000565990 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
SF3B3-206ENST00000565990 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
SF3B3-206ENST00000565990 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
SF3B3-206ENST00000565990 MT3P25713 68 aa3.5□□□□□ -1.85
SF3B3-206ENST00000565990 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
SF3B3-206ENST00000565990 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
SF3B3-206ENST00000565990 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
SF3B3-206ENST00000565990 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
SF3B3-206ENST00000565990 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
SF3B3-206ENST00000565990 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
SF3B3-206ENST00000565990 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
SF3B3-206ENST00000565990 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
SF3B3-206ENST00000565990 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
SF3B3-206ENST00000565990 PRM1P04553 51 aa3.04□□□□□ -1.92
SF3B3-206ENST00000565990 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
SF3B3-206ENST00000565990 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
SF3B3-206ENST00000565990 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
SF3B3-206ENST00000565990 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
SF3B3-206ENST00000565990 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
SF3B3-206ENST00000565990 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
SF3B3-206ENST00000565990 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
SF3B3-206ENST00000565990 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
SF3B3-206ENST00000565990 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
SF3B3-206ENST00000565990 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
SF3B3-206ENST00000565990 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 74.6 ms