RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 FCGBPQ9Y6R7 5405 aaPredicted RBP1.4□□□□□ -2.19
CHD9-216ENST00000565803 LPAP08519 4548 aa1.39□□□□□ -2.19
CHD9-216ENST00000565803 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
CHD9-216ENST00000565803 IGLV5-48A0A075B6I7 105 aa1.39□□□□□ -2.19
CHD9-216ENST00000565803 KRTAP2-1Q9BYU5 128 aa1.39□□□□□ -2.19
CHD9-216ENST00000565803 MT1HP80294 61 aa1.38□□□□□ -2.19
CHD9-216ENST00000565803 KRTAP5-8O75690 187 aa1.38□□□□□ -2.19
CHD9-216ENST00000565803 LCE3CQ5T5A8 94 aa1.38□□□□□ -2.19
CHD9-216ENST00000565803 MMP24-AS1A0A0U1RRL7 71 aa1.36□□□□□ -2.19
CHD9-216ENST00000565803 KRTAP5-11Q6L8G4 156 aa1.36□□□□□ -2.19
CHD9-216ENST00000565803 KRTAP10-12P60413 245 aa1.35□□□□□ -2.19
CHD9-216ENST00000565803 SPINK6Q6UWN8 80 aa1.34□□□□□ -2.19
CHD9-216ENST00000565803 KRTAP5-5Q701N2 237 aaPredicted RBP1.34□□□□□ -2.19
CHD9-216ENST00000565803 KRTAP10-5P60370 271 aa1.33□□□□□ -2.2
CHD9-216ENST00000565803 KRTAP13-3Q3SY46 172 aa1.33□□□□□ -2.2
CHD9-216ENST00000565803 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
CHD9-216ENST00000565803 A0A096LNI7 61 aa1.32□□□□□ -2.2
CHD9-216ENST00000565803 S4R3F8 94 aa1.32□□□□□ -2.2
CHD9-216ENST00000565803 KMT2DO14686 5537 aa1.3□□□□□ -2.2
CHD9-216ENST00000565803 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
CHD9-216ENST00000565803 SYNE2Q8WXH0 6885 aaKnown RBP1.29□□□□□ -2.2
CHD9-216ENST00000565803 KRTAP4-3Q9BYR4 195 aa1.28□□□□□ -2.2
CHD9-216ENST00000565803 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.2
CHD9-216ENST00000565803 KRTAP4-1Q9BYQ7 146 aa1.28□□□□□ -2.21
CHD9-216ENST00000565803 KRTAP5-1Q6L8H4 278 aa1.27□□□□□ -2.21
CHD9-216ENST00000565803 KRTAP13-1Q8IUC0 172 aa1.27□□□□□ -2.21
CHD9-216ENST00000565803 KRTAP9-6A8MVA2 160 aa1.26□□□□□ -2.21
CHD9-216ENST00000565803 KRTAP10-7P60409 375 aaPredicted RBP1.25□□□□□ -2.21
CHD9-216ENST00000565803 LCE3EQ5T5B0 92 aa1.25□□□□□ -2.21
CHD9-216ENST00000565803 KRTAP10-10P60014 251 aa1.23□□□□□ -2.21
CHD9-216ENST00000565803 RPS29P62273 56 aaKnown RBP1.22□□□□□ -2.21
CHD9-216ENST00000565803 M0R2T5 61 aa1.22□□□□□ -2.21
CHD9-216ENST00000565803 MUC12Q9UKN1 5478 aa1.21□□□□□ -2.22
CHD9-216ENST00000565803 SPRR5A0A1B0GTR4 108 aa1.2□□□□□ -2.22
CHD9-216ENST00000565803 MT2AP02795 61 aa1.19□□□□□ -2.22
CHD9-216ENST00000565803 KRTAP12-3P60328 96 aa1.17□□□□□ -2.22
CHD9-216ENST00000565803 LCE3DQ9BYE3 92 aa1.17□□□□□ -2.22
CHD9-216ENST00000565803 MDN1Q9NU22 5596 aa1.17□□□□□ -2.22
CHD9-216ENST00000565803 KRTAP12-4P60329 112 aa1.16□□□□□ -2.22
CHD9-216ENST00000565803 M0QZ58 72 aa1.15□□□□□ -2.23
CHD9-216ENST00000565803 MT1FP04733 61 aa1.15□□□□□ -2.23
CHD9-216ENST00000565803 C9orf92A6NGG3 77 aa1.15□□□□□ -2.23
CHD9-216ENST00000565803 SPRR2EP22531 72 aa1.12□□□□□ -2.23
CHD9-216ENST00000565803 SPRR2BP35325 72 aa1.12□□□□□ -2.23
CHD9-216ENST00000565803 SPRR2AP35326 72 aa1.12□□□□□ -2.23
CHD9-216ENST00000565803 TNP1P09430 55 aa1.11□□□□□ -2.23
CHD9-216ENST00000565803 SPRR2DP22532 72 aa1.11□□□□□ -2.23
CHD9-216ENST00000565803 MUC5ACP98088 5654 aa1.1□□□□□ -2.23
CHD9-216ENST00000565803 KRTAP19-8Q3LI54 63 aa1.07□□□□□ -2.24
CHD9-216ENST00000565803 MUC19Q7Z5P9 8384 aa1.05□□□□□ -2.24
CHD9-216ENST00000565803 OBSCNQ5VST9 7968 aa1.05□□□□□ -2.24
CHD9-216ENST00000565803 SPRR2FQ96RM1 72 aa1.03□□□□□ -2.24
CHD9-216ENST00000565803 MT1BP07438 61 aa1.02□□□□□ -2.25
CHD9-216ENST00000565803 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
CHD9-216ENST00000565803 DSTQ03001 7570 aaKnown RBP0.97□□□□□ -2.25
CHD9-216ENST00000565803 SPRR2GQ9BYE4 73 aa0.97□□□□□ -2.25
CHD9-216ENST00000565803 KRTAP8-1Q8IUC2 63 aa0.95□□□□□ -2.26
CHD9-216ENST00000565803 KRTAP20-2Q3LI61 65 aa0.94□□□□□ -2.26
CHD9-216ENST00000565803 LCE1CQ5T751 118 aa0.93□□□□□ -2.26
CHD9-216ENST00000565803 LCE1BQ5T7P3 118 aa0.93□□□□□ -2.26
CHD9-216ENST00000565803 MT4P47944 62 aa0.92□□□□□ -2.26
CHD9-216ENST00000565803 PRM1P04553 51 aa0.9□□□□□ -2.27
CHD9-216ENST00000565803 LCE3AQ5TA76 89 aa0.89□□□□□ -2.27
CHD9-216ENST00000565803 KRTAP19-3Q7Z4W3 81 aa0.85□□□□□ -2.27
CHD9-216ENST00000565803 MT1XP80297 61 aa0.85□□□□□ -2.27
CHD9-216ENST00000565803 MT1GP13640 62 aa0.82□□□□□ -2.28
CHD9-216ENST00000565803 MT1EP04732 61 aa0.79□□□□□ -2.28
CHD9-216ENST00000565803 KRTAP19-7Q3SYF9 63 aa0.78□□□□□ -2.28
CHD9-216ENST00000565803 MT1MQ8N339 61 aa0.77□□□□□ -2.29
CHD9-216ENST00000565803 KRTAP19-5Q3LI72 72 aa0.76□□□□□ -2.29
CHD9-216ENST00000565803 MT1LQ93083 61 aa0.71□□□□□ -2.3
CHD9-216ENST00000565803 KRTAP6-2Q3LI66 62 aa0.67□□□□□ -2.3
CHD9-216ENST00000565803 KRTAP21-2Q3LI59 83 aa0.66□□□□□ -2.3
CHD9-216ENST00000565803 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.3
CHD9-216ENST00000565803 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
CHD9-216ENST00000565803 MT1AP04731 61 aa0.63□□□□□ -2.31
CHD9-216ENST00000565803 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
CHD9-216ENST00000565803 KRTAP6-1Q3LI64 71 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 164 ms