RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 TRPM2O94759 1503 aa-0.04□□□□□ -2.42
CHD9-211ENST00000564600 SYCP2Q9BX26 1530 aa-0.04□□□□□ -2.42
CHD9-211ENST00000564600 LPAP08519 4548 aa-0.04□□□□□ -2.42
CHD9-211ENST00000564600 ALMS1Q8TCU4 4167 aa-0.04□□□□□ -2.42
CHD9-211ENST00000564600 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.04□□□□□ -2.42
CHD9-211ENST00000564600 FLGP20930 4061 aaPredicted RBP-0.04□□□□□ -2.42
CHD9-211ENST00000564600 ALS2Q96Q42 1657 aa-0.05□□□□□ -2.42
CHD9-211ENST00000564600 CMYA5Q8N3K9 4069 aa-0.05□□□□□ -2.42
CHD9-211ENST00000564600 KIF21BO75037 1637 aa-0.05□□□□□ -2.42
CHD9-211ENST00000564600 PREX2Q70Z35 1606 aa-0.05□□□□□ -2.42
CHD9-211ENST00000564600 PKHD1L1Q86WI1 4243 aa-0.05□□□□□ -2.42
CHD9-211ENST00000564600 ABCC8Q09428 1581 aa-0.05□□□□□ -2.42
CHD9-211ENST00000564600 TIAM1Q13009 1591 aa-0.05□□□□□ -2.42
CHD9-211ENST00000564600 ABCA10Q8WWZ4 1543 aa-0.05□□□□□ -2.42
CHD9-211ENST00000564600 CDC42BPAQ5VT25 1732 aa-0.05□□□□□ -2.42
CHD9-211ENST00000564600 ABCA5Q8WWZ7 1642 aa-0.05□□□□□ -2.42
CHD9-211ENST00000564600 MROH2BQ7Z745 1585 aa-0.06□□□□□ -2.42
CHD9-211ENST00000564600 DNAH10Q8IVF4 4471 aa-0.06□□□□□ -2.42
CHD9-211ENST00000564600 SNRPGP15A8MWD9 76 aa-0.06□□□□□ -2.42
CHD9-211ENST00000564600 H3BUX3 64 aa-0.06□□□□□ -2.42
CHD9-211ENST00000564600 DNAH5Q8TE73 4624 aa-0.06□□□□□ -2.42
CHD9-211ENST00000564600 IQGAP1P46940 1657 aa-0.06□□□□□ -2.42
CHD9-211ENST00000564600 APOBP04114 4563 aaKnown RBP-0.06□□□□□ -2.42
CHD9-211ENST00000564600 IQGAP3Q86VI3 1631 aa-0.06□□□□□ -2.42
CHD9-211ENST00000564600 CCDC180Q9P1Z9 1646 aa-0.06□□□□□ -2.42
CHD9-211ENST00000564600 DUOX1Q9NRD9 1551 aa-0.06□□□□□ -2.42
CHD9-211ENST00000564600 DNAH2Q9P225 4427 aa-0.07□□□□□ -2.42
CHD9-211ENST00000564600 KRTAP19-2Q3LHN2 52 aa-0.07□□□□□ -2.42
CHD9-211ENST00000564600 RHPN1-AS1Q9BWJ2 59 aa-0.07□□□□□ -2.42
CHD9-211ENST00000564600 TTTY10Q9BZA0 68 aa-0.07□□□□□ -2.42
CHD9-211ENST00000564600 CLTCL1P53675 1640 aa-0.07□□□□□ -2.42
CHD9-211ENST00000564600 ABCA9Q8IUA7 1624 aa-0.07□□□□□ -2.42
CHD9-211ENST00000564600 PKD1P98161 4303 aa-0.07□□□□□ -2.42
CHD9-211ENST00000564600 DNAH8Q96JB1 4490 aa-0.07□□□□□ -2.42
CHD9-211ENST00000564600 SAMD9LQ8IVG5 1584 aa-0.07□□□□□ -2.42
CHD9-211ENST00000564600 DDX60Q8IY21 1712 aaKnown RBP-0.07□□□□□ -2.42
CHD9-211ENST00000564600 DNAH11Q96DT5 4516 aa-0.08□□□□□ -2.42
CHD9-211ENST00000564600 MROH2AA6NES4 1674 aa-0.08□□□□□ -2.42
CHD9-211ENST00000564600 FAM208AQ9UK61 1670 aaKnown RBP-0.08□□□□□ -2.42
CHD9-211ENST00000564600 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.08□□□□□ -2.42
CHD9-211ENST00000564600 FANCD2Q9BXW9 1451 aa-0.08□□□□□ -2.42
CHD9-211ENST00000564600 DNAH9Q9NYC9 4486 aa-0.08□□□□□ -2.42
CHD9-211ENST00000564600 DEFB133Q30KQ1 61 aa-0.08□□□□□ -2.42
CHD9-211ENST00000564600 DEFB124Q8NES8 71 aa-0.08□□□□□ -2.42
CHD9-211ENST00000564600 ANK3Q12955 4377 aaKnown RBP-0.08□□□□□ -2.42
CHD9-211ENST00000564600 VPS13DQ5THJ4 4388 aa-0.08□□□□□ -2.42
CHD9-211ENST00000564600 FAT2Q9NYQ8 4349 aa-0.08□□□□□ -2.42
CHD9-211ENST00000564600 DNAH17Q9UFH2 4485 aa-0.08□□□□□ -2.42
CHD9-211ENST00000564600 TOP2AP11388 1531 aaKnown RBP-0.08□□□□□ -2.42
CHD9-211ENST00000564600 MUC17Q685J3 4493 aa-0.09□□□□□ -2.42
CHD9-211ENST00000564600 IQGAP2Q13576 1575 aa-0.09□□□□□ -2.42
CHD9-211ENST00000564600 DEFB4AO15263 64 aa-0.09□□□□□ -2.42
CHD9-211ENST00000564600 STATHP02808 62 aa-0.09□□□□□ -2.42
CHD9-211ENST00000564600 POLR2KP53803 58 aaKnown RBP-0.09□□□□□ -2.42
CHD9-211ENST00000564600 LINC01556Q5JQF7 62 aa-0.09□□□□□ -2.42
CHD9-211ENST00000564600 LINC01590Q5TEZ4 76 aa-0.09□□□□□ -2.42
CHD9-211ENST00000564600 NDUFA1O15239 70 aa-0.1□□□□□ -2.43
CHD9-211ENST00000564600 KRTAP19-5Q3LI72 72 aa-0.1□□□□□ -2.43
CHD9-211ENST00000564600 LEAP2Q969E1 77 aa-0.1□□□□□ -2.43
CHD9-211ENST00000564600 DEFB108AA8MXU0 73 aa-0.11□□□□□ -2.43
CHD9-211ENST00000564600 TOMM5Q8N4H5 51 aa-0.11□□□□□ -2.43
CHD9-211ENST00000564600 DEFB108BQ8NET1 73 aa-0.11□□□□□ -2.43
CHD9-211ENST00000564600 GCC2Q8IWJ2 1684 aa-0.11□□□□□ -2.43
CHD9-211ENST00000564600 A0A096LPF7 62 aa-0.12□□□□□ -2.43
CHD9-211ENST00000564600 H3BSH0 61 aa-0.12□□□□□ -2.43
CHD9-211ENST00000564600 HTN1P15515 57 aa-0.12□□□□□ -2.43
CHD9-211ENST00000564600 TOMM7Q9P0U1 55 aa-0.12□□□□□ -2.43
CHD9-211ENST00000564600 PRCDQ00LT1 54 aa-0.13□□□□□ -2.43
CHD9-211ENST00000564600 TMEM167AQ8TBQ9 72 aa-0.13□□□□□ -2.43
CHD9-211ENST00000564600 A0A096LNI7 61 aa-0.14□□□□□ -2.43
CHD9-211ENST00000564600 K7EIM0 57 aa-0.14□□□□□ -2.43
CHD9-211ENST00000564600 HTN3P15516 51 aa-0.14□□□□□ -2.43
CHD9-211ENST00000564600 SNRPGP62308 76 aaKnown RBP-0.15□□□□□ -2.43
CHD9-211ENST00000564600 ARHGAP5-AS1Q96IT6 56 aa-0.16□□□□□ -2.44
CHD9-211ENST00000564600 APELAP0DMC3 54 aa-0.18□□□□□ -2.44
CHD9-211ENST00000564600 RPL39P5Q59GN2 51 aa-0.21□□□□□ -2.44
CHD9-211ENST00000564600 RPL39P62891 51 aaKnown RBP-0.22□□□□□ -2.44
CHD9-211ENST00000564600 RPL39LQ96EH5 51 aaKnown RBP-0.23□□□□□ -2.45
Retrieved 78 of 20,778 RNA–protein pairs in 52.9 ms