RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 DMDP11532 3685 aa-0.39□□□□□ -2.47
UBR1-205ENST00000564540 VPS13CQ709C8 3753 aa-0.39□□□□□ -2.47
UBR1-205ENST00000564540 MT1HL1P0DM35 61 aa-0.39□□□□□ -2.47
UBR1-205ENST00000564540 TOMM5Q8N4H5 51 aa-0.39□□□□□ -2.47
UBR1-205ENST00000564540 MUC3AQ02505 3323 aa-0.4□□□□□ -2.47
UBR1-205ENST00000564540 MT1EP04732 61 aa-0.4□□□□□ -2.47
UBR1-205ENST00000564540 SPART-AS1P0CW21 52 aa-0.4□□□□□ -2.47
UBR1-205ENST00000564540 DCHS1Q96JQ0 3298 aa-0.4□□□□□ -2.47
UBR1-205ENST00000564540 WDFY4Q6ZS81 3184 aa-0.4□□□□□ -2.47
UBR1-205ENST00000564540 IQGAP2Q13576 1575 aa-0.4□□□□□ -2.47
UBR1-205ENST00000564540 CENPEQ02224 2701 aa-0.41□□□□□ -2.47
UBR1-205ENST00000564540 PCNTO95613 3336 aa-0.41□□□□□ -2.48
UBR1-205ENST00000564540 USP34Q70CQ2 3546 aa-0.42□□□□□ -2.48
UBR1-205ENST00000564540 MT1LQ93083 61 aa-0.42□□□□□ -2.48
UBR1-205ENST00000564540 MT2AP02795 61 aa-0.43□□□□□ -2.48
UBR1-205ENST00000564540 MT1MQ8N339 61 aa-0.43□□□□□ -2.48
UBR1-205ENST00000564540 CEP350Q5VT06 3117 aa-0.43□□□□□ -2.48
UBR1-205ENST00000564540 EP400Q96L91 3159 aa-0.44□□□□□ -2.48
UBR1-205ENST00000564540 MT1BP07438 61 aa-0.44□□□□□ -2.48
UBR1-205ENST00000564540 KRTAP20-1Q3LI63 56 aa-0.44□□□□□ -2.48
UBR1-205ENST00000564540 DNAH14Q0VDD8 3507 aa-0.45□□□□□ -2.48
UBR1-205ENST00000564540 MT1GP13640 62 aa-0.45□□□□□ -2.48
UBR1-205ENST00000564540 XIRP2A4UGR9 3374 aa-0.46□□□□□ -2.48
UBR1-205ENST00000564540 UNC80Q8N2C7 3258 aa-0.47□□□□□ -2.48
UBR1-205ENST00000564540 CEP250Q9BV73 2442 aa-0.47□□□□□ -2.49
UBR1-205ENST00000564540 CFAP47Q6ZTR5 3102 aa-0.47□□□□□ -2.49
UBR1-205ENST00000564540 DNAH12Q6ZR08 3092 aa-0.48□□□□□ -2.49
UBR1-205ENST00000564540 ASPMQ8IZT6 3477 aa-0.49□□□□□ -2.49
UBR1-205ENST00000564540 LOC400499M0QZD8 3231 aa-0.51□□□□□ -2.49
UBR1-205ENST00000564540 CENPFP49454 3210 aa-0.51□□□□□ -2.49
UBR1-205ENST00000564540 ATP7AQ04656 1500 aa-0.51□□□□□ -2.49
UBR1-205ENST00000564540 VCANP13611 3396 aa-0.53□□□□□ -2.49
UBR1-205ENST00000564540 DEFB4AO15263 64 aa-0.53□□□□□ -2.49
UBR1-205ENST00000564540 MT1FP04733 61 aa-0.53□□□□□ -2.49
UBR1-205ENST00000564540 VPS13AQ96RL7 3174 aa-0.53□□□□□ -2.49
UBR1-205ENST00000564540 BRCA2P51587 3418 aa-0.54□□□□□ -2.5
UBR1-205ENST00000564540 RPS29P62273 56 aaKnown RBP-0.54□□□□□ -2.5
UBR1-205ENST00000564540 DEFB136Q30KP8 78 aa-0.54□□□□□ -2.5
UBR1-205ENST00000564540 KRTAP19-6Q3LI70 58 aa-0.54□□□□□ -2.5
UBR1-205ENST00000564540 CDH23Q9H251 3354 aa-0.55□□□□□ -2.5
UBR1-205ENST00000564540 LEAP2Q969E1 77 aa-0.55□□□□□ -2.5
UBR1-205ENST00000564540 SAMD9LQ8IVG5 1584 aa-0.55□□□□□ -2.5
UBR1-205ENST00000564540 UTRNP46939 3433 aa-0.58□□□□□ -2.5
UBR1-205ENST00000564540 RPL39P62891 51 aaKnown RBP-0.61□□□□□ -2.51
UBR1-205ENST00000564540 TOP2AP11388 1531 aaKnown RBP-0.62□□□□□ -2.51
UBR1-205ENST00000564540 TOMM7Q9P0U1 55 aa-0.62□□□□□ -2.51
UBR1-205ENST00000564540 GOLGB1Q14789 3259 aaKnown RBP-0.63□□□□□ -2.51
UBR1-205ENST00000564540 KRTAP19-2Q3LHN2 52 aa-0.66□□□□□ -2.52
UBR1-205ENST00000564540 RPL39LQ96EH5 51 aaKnown RBP-0.68□□□□□ -2.52
UBR1-205ENST00000564540 DUOX1Q9NRD9 1551 aa-0.69□□□□□ -2.52
UBR1-205ENST00000564540 MROH2BQ7Z745 1585 aa-0.7□□□□□ -2.52
UBR1-205ENST00000564540 TTTY10Q9BZA0 68 aa-0.71□□□□□ -2.52
UBR1-205ENST00000564540 DEFB133Q30KQ1 61 aa-0.72□□□□□ -2.52
UBR1-205ENST00000564540 LINC01590Q5TEZ4 76 aa-0.72□□□□□ -2.52
UBR1-205ENST00000564540 RHPN1-AS1Q9BWJ2 59 aa-0.72□□□□□ -2.52
UBR1-205ENST00000564540 DEFB124Q8NES8 71 aa-0.73□□□□□ -2.53
UBR1-205ENST00000564540 CD52P31358 61 aa-0.74□□□□□ -2.53
UBR1-205ENST00000564540 HTN1P15515 57 aa-0.77□□□□□ -2.53
UBR1-205ENST00000564540 SNRPGP62308 76 aaKnown RBP-0.79□□□□□ -2.54
UBR1-205ENST00000564540 A0A096LNI7 61 aa-0.8□□□□□ -2.54
UBR1-205ENST00000564540 GCC2Q8IWJ2 1684 aa-0.83□□□□□ -2.54
UBR1-205ENST00000564540 H3BUX3 64 aa-0.83□□□□□ -2.54
UBR1-205ENST00000564540 DEFB104AQ8WTQ1 72 aa-0.83□□□□□ -2.54
UBR1-205ENST00000564540 LINC01556Q5JQF7 62 aa-0.84□□□□□ -2.54
UBR1-205ENST00000564540 A0A096LPF7 62 aa-0.91□□□□□ -2.56
UBR1-205ENST00000564540 K7EIM0 57 aa-0.91□□□□□ -2.56
UBR1-205ENST00000564540 PRCDQ00LT1 54 aa-0.94□□□□□ -2.56
UBR1-205ENST00000564540 APELAP0DMC3 54 aa-0.96□□□□□ -2.56
UBR1-205ENST00000564540 ARHGAP5-AS1Q96IT6 56 aa-0.96□□□□□ -2.56
UBR1-205ENST00000564540 TMEM167AQ8TBQ9 72 aa-0.97□□□□□ -2.56
UBR1-205ENST00000564540 Q9Y3F1 56 aa-0.97□□□□□ -2.56
UBR1-205ENST00000564540 HTN3P15516 51 aa-1□□□□□ -2.57
UBR1-205ENST00000564540 RPL39P5Q59GN2 51 aa-1.04□□□□□ -2.58
UBR1-205ENST00000564540 COX14Q96I36 57 aa-1.05□□□□□ -2.58
UBR1-205ENST00000564540 DEFB108AA8MXU0 73 aa-1.08□□□□□ -2.58
UBR1-205ENST00000564540 H3BSH0 61 aa-1.08□□□□□ -2.58
UBR1-205ENST00000564540 DEFB108BQ8NET1 73 aa-1.11□□□□□ -2.59
UBR1-205ENST00000564540 STATHP02808 62 aa-1.22□□□□□ -2.6
Retrieved 78 of 20,778 RNA–protein pairs in 110.8 ms