RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
TCF4-220ENST00000563824 SPRR2FQ96RM1 72 aa2.5□□□□□ -2.01
TCF4-220ENST00000563824 A0A087WVE0 104 aa2.49□□□□□ -2.01
TCF4-220ENST00000563824 IGKV3D-7A0A0C4DH55 119 aa2.48□□□□□ -2.01
TCF4-220ENST00000563824 DNAL4O96015 105 aa2.48□□□□□ -2.01
TCF4-220ENST00000563824 SPRR2DP22532 72 aa2.48□□□□□ -2.01
TCF4-220ENST00000563824 LINC01558Q9Y6Z2 57 aa2.48□□□□□ -2.01
TCF4-220ENST00000563824 PDE6GP18545 87 aa2.47□□□□□ -2.01
TCF4-220ENST00000563824 PP632Q6XCG6 107 aa2.47□□□□□ -2.01
TCF4-220ENST00000563824 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
TCF4-220ENST00000563824 JMJD7-PLA2G4BH0Y9G9 81 aa2.45□□□□□ -2.02
TCF4-220ENST00000563824 UQCR11O14957 56 aa2.45□□□□□ -2.02
TCF4-220ENST00000563824 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
TCF4-220ENST00000563824 NDUFB1O75438 58 aa2.44□□□□□ -2.02
TCF4-220ENST00000563824 MT1BP07438 61 aa2.43□□□□□ -2.02
TCF4-220ENST00000563824 NREPQ16612 68 aa2.43□□□□□ -2.02
TCF4-220ENST00000563824 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
TCF4-220ENST00000563824 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
TCF4-220ENST00000563824 KRTAP19-8Q3LI54 63 aa2.42□□□□□ -2.02
TCF4-220ENST00000563824 H0Y9P7 68 aa2.41□□□□□ -2.02
TCF4-220ENST00000563824 SPINK7P58062 85 aa2.41□□□□□ -2.02
TCF4-220ENST00000563824 LINC00208Q96KT6 92 aa2.41□□□□□ -2.02
TCF4-220ENST00000563824 LINC00472Q9H8W2 130 aa2.4□□□□□ -2.03
TCF4-220ENST00000563824 SPATA8Q6RVD6 105 aa2.39□□□□□ -2.03
TCF4-220ENST00000563824 WFDC13Q8IUB5 93 aa2.39□□□□□ -2.03
TCF4-220ENST00000563824 ZCCHC13Q8WW36 166 aaKnown RBP2.39□□□□□ -2.03
TCF4-220ENST00000563824 UBL5Q9BZL1 73 aa2.39□□□□□ -2.03
TCF4-220ENST00000563824 KRTAP8-1Q8IUC2 63 aa2.38□□□□□ -2.03
TCF4-220ENST00000563824 SPRR2GQ9BYE4 73 aa2.38□□□□□ -2.03
TCF4-220ENST00000563824 H0YGX0 51 aa2.37□□□□□ -2.03
TCF4-220ENST00000563824 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
TCF4-220ENST00000563824 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
TCF4-220ENST00000563824 H1FX-AS1Q4G0G2 97 aa2.35□□□□□ -2.03
TCF4-220ENST00000563824 LOC110117498A0A087WWA1 95 aa2.32□□□□□ -2.04
TCF4-220ENST00000563824 INE1O15225 51 aa2.3□□□□□ -2.04
TCF4-220ENST00000563824 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
TCF4-220ENST00000563824 ACYP2P14621 99 aa2.29□□□□□ -2.04
TCF4-220ENST00000563824 COA5Q86WW8 74 aa2.27□□□□□ -2.05
TCF4-220ENST00000563824 CRIPTQ9P021 101 aa2.27□□□□□ -2.05
TCF4-220ENST00000563824 A0A1B0GU69 56 aa2.26□□□□□ -2.05
TCF4-220ENST00000563824 MMP24-AS1A0A0U1RRL7 71 aa2.25□□□□□ -2.05
TCF4-220ENST00000563824 MRPL34Q9BQ48 92 aaKnown RBP2.25□□□□□ -2.05
TCF4-220ENST00000563824 K7EQZ3 153 aa2.21□□□□□ -2.06
TCF4-220ENST00000563824 S4R3F8 94 aa2.21□□□□□ -2.06
TCF4-220ENST00000563824 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
TCF4-220ENST00000563824 MT1XP80297 61 aa2.19□□□□□ -2.06
TCF4-220ENST00000563824 PLAC4Q8WY50 150 aa2.17□□□□□ -2.06
TCF4-220ENST00000563824 MT4P47944 62 aa2.16□□□□□ -2.06
TCF4-220ENST00000563824 KRTAP12-3P60328 96 aa2.15□□□□□ -2.07
TCF4-220ENST00000563824 KRTAP12-1P59990 96 aa2.13□□□□□ -2.07
TCF4-220ENST00000563824 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
TCF4-220ENST00000563824 TP53AIP1Q9HCN2 124 aa2.1□□□□□ -2.07
TCF4-220ENST00000563824 KRTAP13-4Q3LI77 160 aa2.09□□□□□ -2.07
TCF4-220ENST00000563824 H0YAA0 97 aa2.08□□□□□ -2.08
TCF4-220ENST00000563824 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
TCF4-220ENST00000563824 KRTAP19-3Q7Z4W3 81 aa2.07□□□□□ -2.08
TCF4-220ENST00000563824 MT1GP13640 62 aa2□□□□□ -2.09
TCF4-220ENST00000563824 M0QZ58 72 aa1.99□□□□□ -2.09
TCF4-220ENST00000563824 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
TCF4-220ENST00000563824 MT1EP04732 61 aa1.98□□□□□ -2.09
TCF4-220ENST00000563824 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
TCF4-220ENST00000563824 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
TCF4-220ENST00000563824 KRTAP19-7Q3SYF9 63 aa1.96□□□□□ -2.1
TCF4-220ENST00000563824 MT1MQ8N339 61 aa1.91□□□□□ -2.1
TCF4-220ENST00000563824 C10orf95Q9H7T3 257 aa1.85□□□□□ -2.11
TCF4-220ENST00000563824 KRTAP19-5Q3LI72 72 aa1.83□□□□□ -2.12
TCF4-220ENST00000563824 MT1LQ93083 61 aa1.83□□□□□ -2.12
TCF4-220ENST00000563824 A0A0D9SG42 100 aa1.8□□□□□ -2.12
TCF4-220ENST00000563824 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
TCF4-220ENST00000563824 SYNE1Q8NF91 8797 aaKnown RBP1.73□□□□□ -2.13
TCF4-220ENST00000563824 TNP1P09430 55 aa1.63□□□□□ -2.15
TCF4-220ENST00000563824 MT1AP04731 61 aa1.57□□□□□ -2.16
TCF4-220ENST00000563824 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
TCF4-220ENST00000563824 KRTAP6-2Q3LI66 62 aa1.55□□□□□ -2.16
TCF4-220ENST00000563824 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
TCF4-220ENST00000563824 PRM1P04553 51 aa1.11□□□□□ -2.23
TCF4-220ENST00000563824 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
TCF4-220ENST00000563824 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 182 ms