RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 SPRR2AP35326 72 aa3.42□□□□□ -1.86
GINS3-204ENST00000561952 A8MU10 97 aa3.41□□□□□ -1.86
GINS3-204ENST00000561952 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
GINS3-204ENST00000561952 SVIPQ8NHG7 77 aa3.41□□□□□ -1.86
GINS3-204ENST00000561952 MIR22HGQ0VDD5 57 aa3.39□□□□□ -1.87
GINS3-204ENST00000561952 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
GINS3-204ENST00000561952 A0A1B0GU33 70 aa3.38□□□□□ -1.87
GINS3-204ENST00000561952 KRTAP2-3P0C7H8 128 aa3.36□□□□□ -1.87
GINS3-204ENST00000561952 KRTAP2-4Q9BYR9 128 aa3.36□□□□□ -1.87
GINS3-204ENST00000561952 KRTAP12-2P59991 146 aa3.35□□□□□ -1.87
GINS3-204ENST00000561952 SPRR2DP22532 72 aa3.31□□□□□ -1.88
GINS3-204ENST00000561952 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
GINS3-204ENST00000561952 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
GINS3-204ENST00000561952 KRTAP13-4Q3LI77 160 aa3.29□□□□□ -1.88
GINS3-204ENST00000561952 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
GINS3-204ENST00000561952 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
GINS3-204ENST00000561952 KRTAP2-1Q9BYU5 128 aa3.26□□□□□ -1.89
GINS3-204ENST00000561952 K7ERS5 55 aa3.21□□□□□ -1.9
GINS3-204ENST00000561952 KTN1-AS1Q86SY8 53 aa3.21□□□□□ -1.9
GINS3-204ENST00000561952 CAMK2N1Q7Z7J9 78 aa3.2□□□□□ -1.9
GINS3-204ENST00000561952 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
GINS3-204ENST00000561952 A0A0D9SG42 100 aa3.18□□□□□ -1.9
GINS3-204ENST00000561952 MT3P25713 68 aa3.11□□□□□ -1.91
GINS3-204ENST00000561952 ROMO1P60602 79 aa3.11□□□□□ -1.91
GINS3-204ENST00000561952 SPINT4Q6UDR6 99 aa3.11□□□□□ -1.91
GINS3-204ENST00000561952 KRTAP19-7Q3SYF9 63 aa3.09□□□□□ -1.91
GINS3-204ENST00000561952 MT1EP04732 61 aa3.08□□□□□ -1.92
GINS3-204ENST00000561952 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
GINS3-204ENST00000561952 PRAC1Q96KF2 57 aa3.06□□□□□ -1.92
GINS3-204ENST00000561952 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
GINS3-204ENST00000561952 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
GINS3-204ENST00000561952 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.92
GINS3-204ENST00000561952 KRTAP25-1Q3LHN0 102 aa3.02□□□□□ -1.93
GINS3-204ENST00000561952 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
GINS3-204ENST00000561952 MT1GP13640 62 aa2.95□□□□□ -1.94
GINS3-204ENST00000561952 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
GINS3-204ENST00000561952 LCE3AQ5TA76 89 aa2.94□□□□□ -1.94
GINS3-204ENST00000561952 MT1MQ8N339 61 aa2.94□□□□□ -1.94
GINS3-204ENST00000561952 MT1LQ93083 61 aa2.93□□□□□ -1.94
GINS3-204ENST00000561952 MT4P47944 62 aa2.92□□□□□ -1.94
GINS3-204ENST00000561952 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
GINS3-204ENST00000561952 TNP1P09430 55 aa2.91□□□□□ -1.94
GINS3-204ENST00000561952 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
GINS3-204ENST00000561952 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
GINS3-204ENST00000561952 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
GINS3-204ENST00000561952 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
GINS3-204ENST00000561952 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
GINS3-204ENST00000561952 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
GINS3-204ENST00000561952 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
GINS3-204ENST00000561952 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
GINS3-204ENST00000561952 SYNE1Q8NF91 8797 aaKnown RBP2.68□□□□□ -1.98
GINS3-204ENST00000561952 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
GINS3-204ENST00000561952 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
GINS3-204ENST00000561952 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
GINS3-204ENST00000561952 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
GINS3-204ENST00000561952 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
GINS3-204ENST00000561952 LCE3CQ5T5A8 94 aa2.56□□□□□ -2
GINS3-204ENST00000561952 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
GINS3-204ENST00000561952 NDUFAF8A1L188 74 aa2.48□□□□□ -2.01
GINS3-204ENST00000561952 MT1AP04731 61 aa2.48□□□□□ -2.01
GINS3-204ENST00000561952 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
GINS3-204ENST00000561952 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
GINS3-204ENST00000561952 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
GINS3-204ENST00000561952 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
GINS3-204ENST00000561952 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
GINS3-204ENST00000561952 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
GINS3-204ENST00000561952 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
GINS3-204ENST00000561952 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
GINS3-204ENST00000561952 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
GINS3-204ENST00000561952 A0A0A0MQY5 61 aa2.21□□□□□ -2.06
GINS3-204ENST00000561952 INE1O15225 51 aa2.1□□□□□ -2.07
GINS3-204ENST00000561952 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
GINS3-204ENST00000561952 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
GINS3-204ENST00000561952 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
GINS3-204ENST00000561952 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
GINS3-204ENST00000561952 PRM1P04553 51 aa1.61□□□□□ -2.15
GINS3-204ENST00000561952 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
GINS3-204ENST00000561952 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 48.2 ms