RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 AHNAK2Q8IVF2 5795 aa6.97□□□□□ -1.29
COMMD4-204ENST00000561662 MT4P47944 62 aa6.96□□□□□ -1.3
COMMD4-204ENST00000561662 K7ERS5 55 aa6.94□□□□□ -1.3
COMMD4-204ENST00000561662 BRK1Q8WUW1 75 aa6.9□□□□□ -1.3
COMMD4-204ENST00000561662 C10orf95Q9H7T3 257 aa6.9□□□□□ -1.3
COMMD4-204ENST00000561662 KRTAP5-10Q6L8G5 202 aa6.88□□□□□ -1.31
COMMD4-204ENST00000561662 KRTAP19-3Q7Z4W3 81 aa6.87□□□□□ -1.31
COMMD4-204ENST00000561662 KRTAP19-7Q3SYF9 63 aa6.83□□□□□ -1.32
COMMD4-204ENST00000561662 MT1EP04732 61 aa6.8□□□□□ -1.32
COMMD4-204ENST00000561662 LCE4AQ5TA78 99 aa6.8□□□□□ -1.32
COMMD4-204ENST00000561662 TNP1P09430 55 aa6.68□□□□□ -1.34
COMMD4-204ENST00000561662 KRTAP4-6Q9BYQ5 205 aa6.68□□□□□ -1.34
COMMD4-204ENST00000561662 ROMO1P60602 79 aa6.67□□□□□ -1.34
COMMD4-204ENST00000561662 KRTAP5-7Q6L8G8 165 aa6.67□□□□□ -1.34
COMMD4-204ENST00000561662 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
COMMD4-204ENST00000561662 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
COMMD4-204ENST00000561662 MT1GP13640 62 aa6.59□□□□□ -1.35
COMMD4-204ENST00000561662 KRTAP5-3Q6L8H2 238 aa6.57□□□□□ -1.36
COMMD4-204ENST00000561662 SPRR5A0A1B0GTR4 108 aa6.56□□□□□ -1.36
COMMD4-204ENST00000561662 KRTAP5-4Q6L8H1 288 aa6.56□□□□□ -1.36
COMMD4-204ENST00000561662 PMAIP1Q13794 54 aa6.53□□□□□ -1.36
COMMD4-204ENST00000561662 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
COMMD4-204ENST00000561662 MT1MQ8N339 61 aa6.53□□□□□ -1.36
COMMD4-204ENST00000561662 KRTAP19-5Q3LI72 72 aa6.52□□□□□ -1.37
COMMD4-204ENST00000561662 KRTAP4-3Q9BYR4 195 aa6.51□□□□□ -1.37
COMMD4-204ENST00000561662 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
COMMD4-204ENST00000561662 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
COMMD4-204ENST00000561662 MT1LQ93083 61 aa6.39□□□□□ -1.39
COMMD4-204ENST00000561662 KRTAP20-2Q3LI61 65 aa6.29□□□□□ -1.4
COMMD4-204ENST00000561662 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
COMMD4-204ENST00000561662 PRAC1Q96KF2 57 aa6.18□□□□□ -1.42
COMMD4-204ENST00000561662 KTN1-AS1Q86SY8 53 aa6.16□□□□□ -1.42
COMMD4-204ENST00000561662 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
COMMD4-204ENST00000561662 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
COMMD4-204ENST00000561662 KRTAP12-4P60329 112 aa6.02□□□□□ -1.45
COMMD4-204ENST00000561662 KRTAP5-5Q701N2 237 aaPredicted RBP6.02□□□□□ -1.45
COMMD4-204ENST00000561662 SYNE1Q8NF91 8797 aaKnown RBP5.95□□□□□ -1.46
COMMD4-204ENST00000561662 KRTAP19-4Q3LI73 84 aa5.93□□□□□ -1.46
COMMD4-204ENST00000561662 KRTAP4-11Q9BYQ6 195 aa5.9□□□□□ -1.46
COMMD4-204ENST00000561662 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
COMMD4-204ENST00000561662 AHNAKQ09666 5890 aaKnown RBP5.86□□□□□ -1.47
COMMD4-204ENST00000561662 MUC5ACP98088 5654 aa5.85□□□□□ -1.47
COMMD4-204ENST00000561662 LCE3CQ5T5A8 94 aa5.83□□□□□ -1.48
COMMD4-204ENST00000561662 MUC5BQ9HC84 5762 aaPredicted RBP5.8□□□□□ -1.48
COMMD4-204ENST00000561662 KRTAP5-8O75690 187 aa5.76□□□□□ -1.49
COMMD4-204ENST00000561662 SVIPQ8NHG7 77 aa5.74□□□□□ -1.49
COMMD4-204ENST00000561662 KRTAP5-2Q701N4 177 aa5.63□□□□□ -1.51
COMMD4-204ENST00000561662 KRTAP9-6A8MVA2 160 aa5.54□□□□□ -1.52
COMMD4-204ENST00000561662 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
COMMD4-204ENST00000561662 KRTAP6-1Q3LI64 71 aa5.48□□□□□ -1.53
COMMD4-204ENST00000561662 OBSCNQ5VST9 7968 aa5.45□□□□□ -1.54
COMMD4-204ENST00000561662 MT1AP04731 61 aa5.4□□□□□ -1.54
COMMD4-204ENST00000561662 KRTAP6-2Q3LI66 62 aa5.37□□□□□ -1.55
COMMD4-204ENST00000561662 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
COMMD4-204ENST00000561662 KRTAP5-1Q6L8H4 278 aa5.2□□□□□ -1.58
COMMD4-204ENST00000561662 LUZP6Q538Z0 58 aa5.01□□□□□ -1.61
COMMD4-204ENST00000561662 MT3P25713 68 aa4.96□□□□□ -1.62
COMMD4-204ENST00000561662 NDUFAF8A1L188 74 aa4.69□□□□□ -1.66
COMMD4-204ENST00000561662 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
COMMD4-204ENST00000561662 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
COMMD4-204ENST00000561662 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
COMMD4-204ENST00000561662 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
COMMD4-204ENST00000561662 LCE1CQ5T751 118 aa4.34□□□□□ -1.71
COMMD4-204ENST00000561662 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
COMMD4-204ENST00000561662 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
COMMD4-204ENST00000561662 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
COMMD4-204ENST00000561662 PHGR1C9JFL3 82 aa4.07□□□□□ -1.76
COMMD4-204ENST00000561662 LCE1FQ5T754 118 aa4□□□□□ -1.77
COMMD4-204ENST00000561662 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
COMMD4-204ENST00000561662 INE1O15225 51 aa3.88□□□□□ -1.79
COMMD4-204ENST00000561662 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
COMMD4-204ENST00000561662 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
COMMD4-204ENST00000561662 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
COMMD4-204ENST00000561662 H3BS24 57 aa3.47□□□□□ -1.85
COMMD4-204ENST00000561662 PRM1P04553 51 aa3.45□□□□□ -1.86
COMMD4-204ENST00000561662 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
COMMD4-204ENST00000561662 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
COMMD4-204ENST00000561662 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 242.8 ms