RNA–Protein interactions for RNA: ENST00000560660.1

IVD-212, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 2

Gene IVD, Length 638 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-212ENST00000560660 MT1XP80297 61 aa4.93□□□□□ -1.62
IVD-212ENST00000560660 CRIPTQ9P021 101 aa4.92□□□□□ -1.62
IVD-212ENST00000560660 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
IVD-212ENST00000560660 A0A1B0GU33 70 aa4.84□□□□□ -1.63
IVD-212ENST00000560660 K7ERS5 55 aa4.84□□□□□ -1.63
IVD-212ENST00000560660 PLAC4Q8WY50 150 aa4.8□□□□□ -1.64
IVD-212ENST00000560660 H0YAA0 97 aa4.75□□□□□ -1.65
IVD-212ENST00000560660 LINC01554Q52M75 96 aa4.75□□□□□ -1.65
IVD-212ENST00000560660 PRAC1Q96KF2 57 aa4.75□□□□□ -1.65
IVD-212ENST00000560660 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
IVD-212ENST00000560660 ADM2Q7Z4H4 148 aa4.7□□□□□ -1.66
IVD-212ENST00000560660 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
IVD-212ENST00000560660 KRTAP10-12P60413 245 aa4.67□□□□□ -1.66
IVD-212ENST00000560660 AHNAK2Q8IVF2 5795 aa4.66□□□□□ -1.66
IVD-212ENST00000560660 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.67
IVD-212ENST00000560660 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
IVD-212ENST00000560660 MT4P47944 62 aa4.62□□□□□ -1.67
IVD-212ENST00000560660 ROMO1P60602 79 aa4.61□□□□□ -1.67
IVD-212ENST00000560660 R4GN34 69 aa4.55□□□□□ -1.68
IVD-212ENST00000560660 M0QZ58 72 aa4.53□□□□□ -1.68
IVD-212ENST00000560660 KRTAP5-7Q6L8G8 165 aa4.53□□□□□ -1.68
IVD-212ENST00000560660 A0A0D9SG42 100 aa4.49□□□□□ -1.69
IVD-212ENST00000560660 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
IVD-212ENST00000560660 KRTAP13-4Q3LI77 160 aa4.47□□□□□ -1.69
IVD-212ENST00000560660 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.7
IVD-212ENST00000560660 P0C880 135 aa4.46□□□□□ -1.7
IVD-212ENST00000560660 MT3P25713 68 aa4.42□□□□□ -1.7
IVD-212ENST00000560660 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
IVD-212ENST00000560660 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
IVD-212ENST00000560660 MT1EP04732 61 aa4.4□□□□□ -1.71
IVD-212ENST00000560660 SPINT4Q6UDR6 99 aa4.4□□□□□ -1.71
IVD-212ENST00000560660 KRTAP12-1P59990 96 aa4.39□□□□□ -1.71
IVD-212ENST00000560660 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
IVD-212ENST00000560660 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
IVD-212ENST00000560660 MT1GP13640 62 aa4.32□□□□□ -1.72
IVD-212ENST00000560660 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
IVD-212ENST00000560660 MT1MQ8N339 61 aa4.24□□□□□ -1.73
IVD-212ENST00000560660 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
IVD-212ENST00000560660 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
IVD-212ENST00000560660 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
IVD-212ENST00000560660 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
IVD-212ENST00000560660 CAMK2N1Q7Z7J9 78 aa4.16□□□□□ -1.74
IVD-212ENST00000560660 MT1LQ93083 61 aa4.12□□□□□ -1.75
IVD-212ENST00000560660 TNP1P09430 55 aa4.03□□□□□ -1.76
IVD-212ENST00000560660 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
IVD-212ENST00000560660 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
IVD-212ENST00000560660 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
IVD-212ENST00000560660 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
IVD-212ENST00000560660 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
IVD-212ENST00000560660 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
IVD-212ENST00000560660 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
IVD-212ENST00000560660 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
IVD-212ENST00000560660 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
IVD-212ENST00000560660 LCE3AQ5TA76 89 aa3.8□□□□□ -1.8
IVD-212ENST00000560660 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
IVD-212ENST00000560660 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
IVD-212ENST00000560660 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
IVD-212ENST00000560660 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
IVD-212ENST00000560660 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
IVD-212ENST00000560660 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
IVD-212ENST00000560660 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
IVD-212ENST00000560660 MT1AP04731 61 aa3.48□□□□□ -1.85
IVD-212ENST00000560660 INE1O15225 51 aa3.47□□□□□ -1.85
IVD-212ENST00000560660 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
IVD-212ENST00000560660 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
IVD-212ENST00000560660 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
IVD-212ENST00000560660 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
IVD-212ENST00000560660 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
IVD-212ENST00000560660 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
IVD-212ENST00000560660 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
IVD-212ENST00000560660 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
IVD-212ENST00000560660 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
IVD-212ENST00000560660 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
IVD-212ENST00000560660 PRM1P04553 51 aa2.39□□□□□ -2.03
IVD-212ENST00000560660 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
IVD-212ENST00000560660 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
IVD-212ENST00000560660 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
IVD-212ENST00000560660 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 9.1 ms