RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 MROH2AA6NES4 1674 aa-0.78□□□□□ -2.53
SPG11-222ENST00000560435 PRXQ9BXM0 1461 aa-0.79□□□□□ -2.54
SPG11-222ENST00000560435 DMDP11532 3685 aa-0.79□□□□□ -2.54
SPG11-222ENST00000560435 CEP250Q9BV73 2442 aa-0.79□□□□□ -2.54
SPG11-222ENST00000560435 WDFY4Q6ZS81 3184 aa-0.79□□□□□ -2.54
SPG11-222ENST00000560435 TRPM2O94759 1503 aa-0.79□□□□□ -2.54
SPG11-222ENST00000560435 DNAH12Q6ZR08 3092 aa-0.8□□□□□ -2.54
SPG11-222ENST00000560435 ADCY10Q96PN6 1610 aa-0.8□□□□□ -2.54
SPG11-222ENST00000560435 CMC2Q9NRP2 79 aa-0.81□□□□□ -2.54
SPG11-222ENST00000560435 MUC3AQ02505 3323 aa-0.81□□□□□ -2.54
SPG11-222ENST00000560435 IQGAP1P46940 1657 aa-0.81□□□□□ -2.54
SPG11-222ENST00000560435 NRXN3Q9Y4C0 1643 aa-0.82□□□□□ -2.54
SPG11-222ENST00000560435 CENPEQ02224 2701 aa-0.82□□□□□ -2.54
SPG11-222ENST00000560435 NFAT5O94916 1531 aa-0.82□□□□□ -2.54
SPG11-222ENST00000560435 DDX60Q8IY21 1712 aaKnown RBP-0.82□□□□□ -2.54
SPG11-222ENST00000560435 ABCC8Q09428 1581 aa-0.83□□□□□ -2.54
SPG11-222ENST00000560435 FANCD2Q9BXW9 1451 aa-0.83□□□□□ -2.54
SPG11-222ENST00000560435 SMIM31A0A1B0GVY4 71 aa-0.83□□□□□ -2.54
SPG11-222ENST00000560435 NDUFA1O15239 70 aa-0.83□□□□□ -2.54
SPG11-222ENST00000560435 EP400Q96L91 3159 aa-0.83□□□□□ -2.54
SPG11-222ENST00000560435 CLTCL1P53675 1640 aa-0.83□□□□□ -2.54
SPG11-222ENST00000560435 MKI67P46013 3256 aaKnown RBP-0.84□□□□□ -2.54
SPG11-222ENST00000560435 DCHS1Q96JQ0 3298 aa-0.85□□□□□ -2.55
SPG11-222ENST00000560435 USP34Q70CQ2 3546 aa-0.89□□□□□ -2.55
SPG11-222ENST00000560435 KRTAP19-6Q3LI70 58 aa-0.89□□□□□ -2.55
SPG11-222ENST00000560435 LINC01590Q5TEZ4 76 aa-0.89□□□□□ -2.55
SPG11-222ENST00000560435 XIRP2A4UGR9 3374 aa-0.9□□□□□ -2.55
SPG11-222ENST00000560435 TOMM7Q9P0U1 55 aa-0.9□□□□□ -2.55
SPG11-222ENST00000560435 CFAP47Q6ZTR5 3102 aa-0.9□□□□□ -2.55
SPG11-222ENST00000560435 DNAH14Q0VDD8 3507 aa-0.9□□□□□ -2.55
SPG11-222ENST00000560435 UNC80Q8N2C7 3258 aa-0.91□□□□□ -2.55
SPG11-222ENST00000560435 LOC400499M0QZD8 3231 aa-0.91□□□□□ -2.55
SPG11-222ENST00000560435 RHPN1-AS1Q9BWJ2 59 aa-0.92□□□□□ -2.56
SPG11-222ENST00000560435 ERICH3Q5RHP9 1530 aa-0.93□□□□□ -2.56
SPG11-222ENST00000560435 SNRPGP15A8MWD9 76 aa-0.93□□□□□ -2.56
SPG11-222ENST00000560435 SAMD9LQ8IVG5 1584 aa-0.95□□□□□ -2.56
SPG11-222ENST00000560435 DEFB133Q30KQ1 61 aa-0.95□□□□□ -2.56
SPG11-222ENST00000560435 TTTY10Q9BZA0 68 aa-0.95□□□□□ -2.56
SPG11-222ENST00000560435 DUOX1Q9NRD9 1551 aa-0.96□□□□□ -2.56
SPG11-222ENST00000560435 RPL39P62891 51 aaKnown RBP-0.96□□□□□ -2.56
SPG11-222ENST00000560435 ASPMQ8IZT6 3477 aa-0.96□□□□□ -2.56
SPG11-222ENST00000560435 A0A096LNI7 61 aa-0.97□□□□□ -2.56
SPG11-222ENST00000560435 KRTAP19-2Q3LHN2 52 aa-0.97□□□□□ -2.56
SPG11-222ENST00000560435 DEFB124Q8NES8 71 aa-0.99□□□□□ -2.57
SPG11-222ENST00000560435 BRCA2P51587 3418 aa-1□□□□□ -2.57
SPG11-222ENST00000560435 HTN1P15515 57 aa-1□□□□□ -2.57
SPG11-222ENST00000560435 CD52P31358 61 aa-1□□□□□ -2.57
SPG11-222ENST00000560435 RPL39LQ96EH5 51 aaKnown RBP-1.01□□□□□ -2.57
SPG11-222ENST00000560435 TOP2AP11388 1531 aaKnown RBP-1.01□□□□□ -2.57
SPG11-222ENST00000560435 ATP7AQ04656 1500 aa-1.01□□□□□ -2.57
SPG11-222ENST00000560435 IQGAP2Q13576 1575 aa-1.02□□□□□ -2.57
SPG11-222ENST00000560435 TOMM5Q8N4H5 51 aa-1.03□□□□□ -2.57
SPG11-222ENST00000560435 VCANP13611 3396 aa-1.04□□□□□ -2.58
SPG11-222ENST00000560435 MROH2BQ7Z745 1585 aa-1.04□□□□□ -2.58
SPG11-222ENST00000560435 CDH23Q9H251 3354 aa-1.05□□□□□ -2.58
SPG11-222ENST00000560435 CENPFP49454 3210 aa-1.06□□□□□ -2.58
SPG11-222ENST00000560435 DEFB104AQ8WTQ1 72 aa-1.06□□□□□ -2.58
SPG11-222ENST00000560435 VPS13AQ96RL7 3174 aa-1.06□□□□□ -2.58
SPG11-222ENST00000560435 H3BUX3 64 aa-1.09□□□□□ -2.58
SPG11-222ENST00000560435 K7EIM0 57 aa-1.13□□□□□ -2.59
SPG11-222ENST00000560435 LINC01556Q5JQF7 62 aa-1.13□□□□□ -2.59
SPG11-222ENST00000560435 UTRNP46939 3433 aa-1.19□□□□□ -2.6
SPG11-222ENST00000560435 ARHGAP5-AS1Q96IT6 56 aa-1.19□□□□□ -2.6
SPG11-222ENST00000560435 PRCDQ00LT1 54 aa-1.21□□□□□ -2.6
SPG11-222ENST00000560435 SNRPGP62308 76 aaKnown RBP-1.22□□□□□ -2.6
SPG11-222ENST00000560435 A0A096LPF7 62 aa-1.24□□□□□ -2.61
SPG11-222ENST00000560435 GCC2Q8IWJ2 1684 aa-1.26□□□□□ -2.61
SPG11-222ENST00000560435 APELAP0DMC3 54 aa-1.26□□□□□ -2.61
SPG11-222ENST00000560435 TMEM167AQ8TBQ9 72 aa-1.26□□□□□ -2.61
SPG11-222ENST00000560435 GOLGB1Q14789 3259 aaKnown RBP-1.33□□□□□ -2.62
SPG11-222ENST00000560435 RPL39P5Q59GN2 51 aa-1.33□□□□□ -2.62
SPG11-222ENST00000560435 HTN3P15516 51 aa-1.36□□□□□ -2.63
SPG11-222ENST00000560435 Q9Y3F1 56 aa-1.36□□□□□ -2.63
SPG11-222ENST00000560435 DEFB108AA8MXU0 73 aa-1.37□□□□□ -2.63
SPG11-222ENST00000560435 H3BSH0 61 aa-1.37□□□□□ -2.63
SPG11-222ENST00000560435 COX14Q96I36 57 aa-1.47□□□□□ -2.64
SPG11-222ENST00000560435 DEFB108BQ8NET1 73 aa-1.53□□□□□ -2.65
SPG11-222ENST00000560435 STATHP02808 62 aa-1.74□□□□□ -2.69
Retrieved 78 of 20,778 RNA–protein pairs in 50 ms