RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 TLN1Q9Y490 2541 aaKnown RBP-0.74□□□□□ -2.53
GABPB1-209ENST00000559100 ATMQ13315 3056 aa-0.75□□□□□ -2.53
GABPB1-209ENST00000559100 IQGAP2Q13576 1575 aa-0.77□□□□□ -2.53
GABPB1-209ENST00000559100 MYO15AQ9UKN7 3530 aa-0.77□□□□□ -2.53
GABPB1-209ENST00000559100 FRYLO94915 3013 aa-0.78□□□□□ -2.53
GABPB1-209ENST00000559100 MT2AP02795 61 aa-0.78□□□□□ -2.53
GABPB1-209ENST00000559100 MT1MQ8N339 61 aa-0.78□□□□□ -2.53
GABPB1-209ENST00000559100 FREM2Q5SZK8 3169 aa-0.78□□□□□ -2.53
GABPB1-209ENST00000559100 DMDP11532 3685 aa-0.84□□□□□ -2.54
GABPB1-209ENST00000559100 RPL39P62891 51 aaKnown RBP-0.84□□□□□ -2.54
GABPB1-209ENST00000559100 LINC01590Q5TEZ4 76 aa-0.84□□□□□ -2.54
GABPB1-209ENST00000559100 RPS29P62273 56 aaKnown RBP-0.85□□□□□ -2.55
GABPB1-209ENST00000559100 CEP250Q9BV73 2442 aa-0.85□□□□□ -2.55
GABPB1-209ENST00000559100 SAMD9LQ8IVG5 1584 aa-0.86□□□□□ -2.55
GABPB1-209ENST00000559100 WDFY3Q8IZQ1 3526 aa-0.86□□□□□ -2.55
GABPB1-209ENST00000559100 ATP7AQ04656 1500 aa-0.87□□□□□ -2.55
GABPB1-209ENST00000559100 PCNTO95613 3336 aa-0.88□□□□□ -2.55
GABPB1-209ENST00000559100 RHPN1-AS1Q9BWJ2 59 aa-0.88□□□□□ -2.55
GABPB1-209ENST00000559100 SZT2Q5T011 3432 aa-0.89□□□□□ -2.55
GABPB1-209ENST00000559100 BOD1L1Q8NFC6 3051 aa-0.89□□□□□ -2.55
GABPB1-209ENST00000559100 MT1BP07438 61 aa-0.9□□□□□ -2.55
GABPB1-209ENST00000559100 RPL39LQ96EH5 51 aaKnown RBP-0.9□□□□□ -2.55
GABPB1-209ENST00000559100 CEP350Q5VT06 3117 aa-0.91□□□□□ -2.56
GABPB1-209ENST00000559100 DUOX1Q9NRD9 1551 aa-0.91□□□□□ -2.56
GABPB1-209ENST00000559100 WDFY4Q6ZS81 3184 aa-0.92□□□□□ -2.56
GABPB1-209ENST00000559100 ABCA13Q86UQ4 5058 aa-0.92□□□□□ -2.56
GABPB1-209ENST00000559100 MUC3AQ02505 3323 aa-0.93□□□□□ -2.56
GABPB1-209ENST00000559100 A0A096LNI7 61 aa-0.95□□□□□ -2.56
GABPB1-209ENST00000559100 SPEGQ15772 3267 aa-0.97□□□□□ -2.56
GABPB1-209ENST00000559100 DNAH12Q6ZR08 3092 aa-0.97□□□□□ -2.56
GABPB1-209ENST00000559100 DEFB133Q30KQ1 61 aa-0.97□□□□□ -2.56
GABPB1-209ENST00000559100 TOP2AP11388 1531 aaKnown RBP-0.98□□□□□ -2.57
GABPB1-209ENST00000559100 HTN1P15515 57 aa-0.98□□□□□ -2.57
GABPB1-209ENST00000559100 MROH2BQ7Z745 1585 aa-0.99□□□□□ -2.57
GABPB1-209ENST00000559100 XIRP2A4UGR9 3374 aa-1□□□□□ -2.57
GABPB1-209ENST00000559100 CENPEQ02224 2701 aa-1.02□□□□□ -2.57
GABPB1-209ENST00000559100 DEFB104AQ8WTQ1 72 aa-1.02□□□□□ -2.57
GABPB1-209ENST00000559100 MKI67P46013 3256 aaKnown RBP-1.02□□□□□ -2.57
GABPB1-209ENST00000559100 TTTY10Q9BZA0 68 aa-1.04□□□□□ -2.58
GABPB1-209ENST00000559100 MT1FP04733 61 aa-1.06□□□□□ -2.58
GABPB1-209ENST00000559100 CD52P31358 61 aa-1.06□□□□□ -2.58
GABPB1-209ENST00000559100 USP34Q70CQ2 3546 aa-1.07□□□□□ -2.58
GABPB1-209ENST00000559100 EP400Q96L91 3159 aa-1.08□□□□□ -2.58
GABPB1-209ENST00000559100 DCHS1Q96JQ0 3298 aa-1.1□□□□□ -2.59
GABPB1-209ENST00000559100 DEFB124Q8NES8 71 aa-1.1□□□□□ -2.59
GABPB1-209ENST00000559100 SNRPGP62308 76 aaKnown RBP-1.12□□□□□ -2.59
GABPB1-209ENST00000559100 ASPMQ8IZT6 3477 aa-1.13□□□□□ -2.59
GABPB1-209ENST00000559100 KRTAP20-1Q3LI63 56 aa-1.14□□□□□ -2.59
GABPB1-209ENST00000559100 LOC400499M0QZD8 3231 aa-1.14□□□□□ -2.59
GABPB1-209ENST00000559100 UNC80Q8N2C7 3258 aa-1.16□□□□□ -2.59
GABPB1-209ENST00000559100 DNAH14Q0VDD8 3507 aa-1.16□□□□□ -2.59
GABPB1-209ENST00000559100 H3BUX3 64 aa-1.16□□□□□ -2.6
GABPB1-209ENST00000559100 GCC2Q8IWJ2 1684 aa-1.16□□□□□ -2.6
GABPB1-209ENST00000559100 CFAP47Q6ZTR5 3102 aa-1.18□□□□□ -2.6
GABPB1-209ENST00000559100 K7EIM0 57 aa-1.19□□□□□ -2.6
GABPB1-209ENST00000559100 ARHGAP5-AS1Q96IT6 56 aa-1.21□□□□□ -2.6
GABPB1-209ENST00000559100 BRCA2P51587 3418 aa-1.24□□□□□ -2.61
GABPB1-209ENST00000559100 PRCDQ00LT1 54 aa-1.25□□□□□ -2.61
GABPB1-209ENST00000559100 LINC01556Q5JQF7 62 aa-1.28□□□□□ -2.61
GABPB1-209ENST00000559100 KRTAP19-6Q3LI70 58 aa-1.29□□□□□ -2.62
GABPB1-209ENST00000559100 VCANP13611 3396 aa-1.33□□□□□ -2.62
GABPB1-209ENST00000559100 CENPFP49454 3210 aa-1.35□□□□□ -2.63
GABPB1-209ENST00000559100 TMEM167AQ8TBQ9 72 aa-1.38□□□□□ -2.63
GABPB1-209ENST00000559100 H3BSH0 61 aa-1.39□□□□□ -2.63
GABPB1-209ENST00000559100 APELAP0DMC3 54 aa-1.4□□□□□ -2.63
GABPB1-209ENST00000559100 KRTAP19-2Q3LHN2 52 aa-1.4□□□□□ -2.63
GABPB1-209ENST00000559100 CDH23Q9H251 3354 aa-1.4□□□□□ -2.63
GABPB1-209ENST00000559100 A0A096LPF7 62 aa-1.41□□□□□ -2.64
GABPB1-209ENST00000559100 RPL39P5Q59GN2 51 aa-1.46□□□□□ -2.64
GABPB1-209ENST00000559100 VPS13AQ96RL7 3174 aa-1.46□□□□□ -2.64
GABPB1-209ENST00000559100 DEFB108AA8MXU0 73 aa-1.49□□□□□ -2.65
GABPB1-209ENST00000559100 UTRNP46939 3433 aa-1.54□□□□□ -2.66
GABPB1-209ENST00000559100 HTN3P15516 51 aa-1.57□□□□□ -2.66
GABPB1-209ENST00000559100 Q9Y3F1 56 aa-1.62□□□□□ -2.67
GABPB1-209ENST00000559100 GOLGB1Q14789 3259 aaKnown RBP-1.74□□□□□ -2.69
GABPB1-209ENST00000559100 DEFB108BQ8NET1 73 aa-1.8□□□□□ -2.7
GABPB1-209ENST00000559100 COX14Q96I36 57 aa-1.82□□□□□ -2.7
GABPB1-209ENST00000559100 STATHP02808 62 aa-2.08□□□□□ -2.74
Retrieved 78 of 20,778 RNA–protein pairs in 140.6 ms