RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
TPM1-215ENST00000558868 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
TPM1-215ENST00000558868 KMT2DO14686 5537 aa5.58□□□□□ -1.52
TPM1-215ENST00000558868 KRTAP4-2Q9BYR5 136 aa5.58□□□□□ -1.52
TPM1-215ENST00000558868 KRTAP4-11Q9BYQ6 195 aa5.53□□□□□ -1.52
TPM1-215ENST00000558868 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
TPM1-215ENST00000558868 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
TPM1-215ENST00000558868 KRTAP19-6Q3LI70 58 aa5.48□□□□□ -1.53
TPM1-215ENST00000558868 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
TPM1-215ENST00000558868 KRTAP10-12P60413 245 aa5.45□□□□□ -1.54
TPM1-215ENST00000558868 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
TPM1-215ENST00000558868 MDN1Q9NU22 5596 aa5.42□□□□□ -1.54
TPM1-215ENST00000558868 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
TPM1-215ENST00000558868 KRTAP8-1Q8IUC2 63 aa5.34□□□□□ -1.55
TPM1-215ENST00000558868 KRTAP2-2Q9BYT5 123 aa5.26□□□□□ -1.57
TPM1-215ENST00000558868 KRTAP2-1Q9BYU5 128 aa5.26□□□□□ -1.57
TPM1-215ENST00000558868 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
TPM1-215ENST00000558868 KRTAP5-9P26371 169 aa5.18□□□□□ -1.58
TPM1-215ENST00000558868 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.59
TPM1-215ENST00000558868 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
TPM1-215ENST00000558868 KRTAP19-7Q3SYF9 63 aa5.05□□□□□ -1.6
TPM1-215ENST00000558868 SPRR2EP22531 72 aa5.02□□□□□ -1.61
TPM1-215ENST00000558868 SPRR2BP35325 72 aa5.02□□□□□ -1.61
TPM1-215ENST00000558868 SPRR2AP35326 72 aa5.02□□□□□ -1.61
TPM1-215ENST00000558868 MT1EP04732 61 aa4.99□□□□□ -1.61
TPM1-215ENST00000558868 SPRR5A0A1B0GTR4 108 aa4.94□□□□□ -1.62
TPM1-215ENST00000558868 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
TPM1-215ENST00000558868 MT1LQ93083 61 aa4.9□□□□□ -1.63
TPM1-215ENST00000558868 LUZP6Q538Z0 58 aa4.89□□□□□ -1.63
TPM1-215ENST00000558868 LCE3CQ5T5A8 94 aa4.89□□□□□ -1.63
TPM1-215ENST00000558868 SPRR2DP22532 72 aa4.86□□□□□ -1.63
TPM1-215ENST00000558868 SPRR2FQ96RM1 72 aa4.85□□□□□ -1.63
TPM1-215ENST00000558868 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
TPM1-215ENST00000558868 AHNAK2Q8IVF2 5795 aa4.83□□□□□ -1.64
TPM1-215ENST00000558868 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
TPM1-215ENST00000558868 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
TPM1-215ENST00000558868 MT1GP13640 62 aa4.78□□□□□ -1.64
TPM1-215ENST00000558868 KRTAP5-10Q6L8G5 202 aa4.76□□□□□ -1.65
TPM1-215ENST00000558868 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
TPM1-215ENST00000558868 MT1MQ8N339 61 aa4.7□□□□□ -1.66
TPM1-215ENST00000558868 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
TPM1-215ENST00000558868 KRTAP5-7Q6L8G8 165 aa4.68□□□□□ -1.66
TPM1-215ENST00000558868 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
TPM1-215ENST00000558868 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
TPM1-215ENST00000558868 MT4P47944 62 aa4.39□□□□□ -1.71
TPM1-215ENST00000558868 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
TPM1-215ENST00000558868 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
TPM1-215ENST00000558868 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
TPM1-215ENST00000558868 MT1AP04731 61 aa4.19□□□□□ -1.74
TPM1-215ENST00000558868 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
TPM1-215ENST00000558868 MUC5ACP98088 5654 aa4.13□□□□□ -1.75
TPM1-215ENST00000558868 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
TPM1-215ENST00000558868 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
TPM1-215ENST00000558868 INE1O15225 51 aa3.98□□□□□ -1.77
TPM1-215ENST00000558868 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
TPM1-215ENST00000558868 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
TPM1-215ENST00000558868 MT3P25713 68 aa3.82□□□□□ -1.8
TPM1-215ENST00000558868 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
TPM1-215ENST00000558868 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
TPM1-215ENST00000558868 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
TPM1-215ENST00000558868 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
TPM1-215ENST00000558868 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
TPM1-215ENST00000558868 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
TPM1-215ENST00000558868 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
TPM1-215ENST00000558868 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
TPM1-215ENST00000558868 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
TPM1-215ENST00000558868 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
TPM1-215ENST00000558868 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
TPM1-215ENST00000558868 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
TPM1-215ENST00000558868 PRM1P04553 51 aa3.13□□□□□ -1.91
TPM1-215ENST00000558868 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
TPM1-215ENST00000558868 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
TPM1-215ENST00000558868 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
TPM1-215ENST00000558868 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
TPM1-215ENST00000558868 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
TPM1-215ENST00000558868 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
TPM1-215ENST00000558868 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
TPM1-215ENST00000558868 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms