RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 COA5Q86WW8 74 aa2.27□□□□□ -2.05
SPG11-208ENST00000558155 MRPL34Q9BQ48 92 aaKnown RBP2.27□□□□□ -2.05
SPG11-208ENST00000558155 NDUFAF8A1L188 74 aa2.26□□□□□ -2.05
SPG11-208ENST00000558155 P0C880 135 aa2.26□□□□□ -2.05
SPG11-208ENST00000558155 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
SPG11-208ENST00000558155 SPRR2DP22532 72 aa2.24□□□□□ -2.05
SPG11-208ENST00000558155 SPINT4Q6UDR6 99 aa2.24□□□□□ -2.05
SPG11-208ENST00000558155 S4R3F8 94 aa2.24□□□□□ -2.05
SPG11-208ENST00000558155 KRTAP8-1Q8IUC2 63 aa2.23□□□□□ -2.05
SPG11-208ENST00000558155 CRIPTQ9P021 101 aa2.23□□□□□ -2.05
SPG11-208ENST00000558155 PRO2289Q9P1D8 64 aa2.23□□□□□ -2.05
SPG11-208ENST00000558155 MMP24-AS1A0A0U1RRL7 71 aa2.22□□□□□ -2.05
SPG11-208ENST00000558155 Q5W150 140 aa2.22□□□□□ -2.05
SPG11-208ENST00000558155 A0A1B0GU69 56 aa2.21□□□□□ -2.06
SPG11-208ENST00000558155 A0A1B0GU33 70 aa2.19□□□□□ -2.06
SPG11-208ENST00000558155 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
SPG11-208ENST00000558155 K7EQZ3 153 aa2.17□□□□□ -2.06
SPG11-208ENST00000558155 KRTAP12-2P59991 146 aa2.16□□□□□ -2.06
SPG11-208ENST00000558155 Q8N9L7 120 aa2.16□□□□□ -2.06
SPG11-208ENST00000558155 PLAC4Q8WY50 150 aa2.16□□□□□ -2.06
SPG11-208ENST00000558155 ACYP2P14621 99 aa2.15□□□□□ -2.07
SPG11-208ENST00000558155 MT1XP80297 61 aa2.15□□□□□ -2.07
SPG11-208ENST00000558155 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
SPG11-208ENST00000558155 TP53AIP1Q9HCN2 124 aa2.14□□□□□ -2.07
SPG11-208ENST00000558155 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
SPG11-208ENST00000558155 H0YAA0 97 aa2.11□□□□□ -2.07
SPG11-208ENST00000558155 R4GN34 69 aa2.06□□□□□ -2.08
SPG11-208ENST00000558155 KRTAP10-12P60413 245 aa2.05□□□□□ -2.08
SPG11-208ENST00000558155 M0QZ58 72 aa2.02□□□□□ -2.09
SPG11-208ENST00000558155 KRTAP4-3Q9BYR4 195 aa2.02□□□□□ -2.09
SPG11-208ENST00000558155 INE1O15225 51 aa2□□□□□ -2.09
SPG11-208ENST00000558155 MT3P25713 68 aa1.99□□□□□ -2.09
SPG11-208ENST00000558155 DSTQ03001 7570 aaKnown RBP1.98□□□□□ -2.09
SPG11-208ENST00000558155 MT4P47944 62 aa1.98□□□□□ -2.09
SPG11-208ENST00000558155 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
SPG11-208ENST00000558155 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
SPG11-208ENST00000558155 KRTAP19-3Q7Z4W3 81 aa1.97□□□□□ -2.09
SPG11-208ENST00000558155 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
SPG11-208ENST00000558155 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
SPG11-208ENST00000558155 KRTAP19-7Q3SYF9 63 aa1.93□□□□□ -2.1
SPG11-208ENST00000558155 MT1EP04732 61 aa1.92□□□□□ -2.1
SPG11-208ENST00000558155 MT1GP13640 62 aa1.92□□□□□ -2.1
SPG11-208ENST00000558155 PP632Q6XCG6 107 aa1.91□□□□□ -2.1
SPG11-208ENST00000558155 SPRR5A0A1B0GTR4 108 aa1.89□□□□□ -2.11
SPG11-208ENST00000558155 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
SPG11-208ENST00000558155 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
SPG11-208ENST00000558155 MT1MQ8N339 61 aa1.85□□□□□ -2.11
SPG11-208ENST00000558155 LCE3CQ5T5A8 94 aa1.84□□□□□ -2.11
SPG11-208ENST00000558155 KRTAP19-5Q3LI72 72 aa1.83□□□□□ -2.12
SPG11-208ENST00000558155 A0A0D9SG42 100 aa1.82□□□□□ -2.12
SPG11-208ENST00000558155 C10orf95Q9H7T3 257 aa1.81□□□□□ -2.12
SPG11-208ENST00000558155 MT1LQ93083 61 aa1.8□□□□□ -2.12
SPG11-208ENST00000558155 KRTAP20-2Q3LI61 65 aa1.79□□□□□ -2.12
SPG11-208ENST00000558155 KRTAP12-4P60329 112 aa1.77□□□□□ -2.13
SPG11-208ENST00000558155 LCE3AQ5TA76 89 aa1.77□□□□□ -2.13
SPG11-208ENST00000558155 KRTAP13-4Q3LI77 160 aa1.75□□□□□ -2.13
SPG11-208ENST00000558155 KRTAP5-5Q701N2 237 aaPredicted RBP1.7□□□□□ -2.14
SPG11-208ENST00000558155 LCE3EQ5T5B0 92 aa1.69□□□□□ -2.14
SPG11-208ENST00000558155 TNP1P09430 55 aa1.67□□□□□ -2.14
SPG11-208ENST00000558155 KRTAP12-1P59990 96 aa1.65□□□□□ -2.15
SPG11-208ENST00000558155 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
SPG11-208ENST00000558155 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
SPG11-208ENST00000558155 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
SPG11-208ENST00000558155 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
SPG11-208ENST00000558155 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
SPG11-208ENST00000558155 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
SPG11-208ENST00000558155 LCE1BQ5T7P3 118 aa1.57□□□□□ -2.16
SPG11-208ENST00000558155 MUC5BQ9HC84 5762 aaPredicted RBP1.56□□□□□ -2.16
SPG11-208ENST00000558155 MT1AP04731 61 aa1.54□□□□□ -2.16
SPG11-208ENST00000558155 KRTAP6-1Q3LI64 71 aa1.53□□□□□ -2.16
SPG11-208ENST00000558155 KRTAP6-2Q3LI66 62 aa1.51□□□□□ -2.17
SPG11-208ENST00000558155 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
SPG11-208ENST00000558155 LCE3DQ9BYE3 92 aa1.24□□□□□ -2.21
SPG11-208ENST00000558155 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
SPG11-208ENST00000558155 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
SPG11-208ENST00000558155 PRM1P04553 51 aa1.06□□□□□ -2.24
SPG11-208ENST00000558155 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
SPG11-208ENST00000558155 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 68 ms