RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 ROMO1P60602 79 aa5.31□□□□□ -1.56
SUPT16H-208ENST00000557652 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
SUPT16H-208ENST00000557652 BRK1Q8WUW1 75 aa5.28□□□□□ -1.56
SUPT16H-208ENST00000557652 LCE3AQ5TA76 89 aa5.27□□□□□ -1.57
SUPT16H-208ENST00000557652 MUC12Q9UKN1 5478 aa5.27□□□□□ -1.57
SUPT16H-208ENST00000557652 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
SUPT16H-208ENST00000557652 SPRR2EP22531 72 aa5.24□□□□□ -1.57
SUPT16H-208ENST00000557652 SPRR2BP35325 72 aa5.24□□□□□ -1.57
SUPT16H-208ENST00000557652 SPRR2AP35326 72 aa5.24□□□□□ -1.57
SUPT16H-208ENST00000557652 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
SUPT16H-208ENST00000557652 MT1EP04732 61 aa5.21□□□□□ -1.58
SUPT16H-208ENST00000557652 KRTAP19-5Q3LI72 72 aa5.21□□□□□ -1.58
SUPT16H-208ENST00000557652 NEBP20929 6669 aa5.18□□□□□ -1.58
SUPT16H-208ENST00000557652 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
SUPT16H-208ENST00000557652 MDN1Q9NU22 5596 aa5.17□□□□□ -1.58
SUPT16H-208ENST00000557652 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
SUPT16H-208ENST00000557652 KRTAP19-3Q7Z4W3 81 aa5.12□□□□□ -1.59
SUPT16H-208ENST00000557652 MT1GP13640 62 aa5.08□□□□□ -1.6
SUPT16H-208ENST00000557652 SPRR2DP22532 72 aa5.07□□□□□ -1.6
SUPT16H-208ENST00000557652 MT1LQ93083 61 aa5.04□□□□□ -1.6
SUPT16H-208ENST00000557652 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
SUPT16H-208ENST00000557652 KRTAP20-1Q3LI63 56 aa5.03□□□□□ -1.6
SUPT16H-208ENST00000557652 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
SUPT16H-208ENST00000557652 PMAIP1Q13794 54 aa5.02□□□□□ -1.61
SUPT16H-208ENST00000557652 PRO0628Q9UI54 55 aa5□□□□□ -1.61
SUPT16H-208ENST00000557652 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
SUPT16H-208ENST00000557652 MT1MQ8N339 61 aa4.93□□□□□ -1.62
SUPT16H-208ENST00000557652 KRTAP2-2Q9BYT5 123 aa4.9□□□□□ -1.63
SUPT16H-208ENST00000557652 KRTAP2-1Q9BYU5 128 aa4.9□□□□□ -1.63
SUPT16H-208ENST00000557652 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
SUPT16H-208ENST00000557652 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
SUPT16H-208ENST00000557652 KTN1-AS1Q86SY8 53 aa4.69□□□□□ -1.66
SUPT16H-208ENST00000557652 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
SUPT16H-208ENST00000557652 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
SUPT16H-208ENST00000557652 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
SUPT16H-208ENST00000557652 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
SUPT16H-208ENST00000557652 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
SUPT16H-208ENST00000557652 SVIPQ8NHG7 77 aa4.39□□□□□ -1.71
SUPT16H-208ENST00000557652 MT4P47944 62 aa4.35□□□□□ -1.71
SUPT16H-208ENST00000557652 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
SUPT16H-208ENST00000557652 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
SUPT16H-208ENST00000557652 MT1AP04731 61 aa4.33□□□□□ -1.72
SUPT16H-208ENST00000557652 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
SUPT16H-208ENST00000557652 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
SUPT16H-208ENST00000557652 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
SUPT16H-208ENST00000557652 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
SUPT16H-208ENST00000557652 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
SUPT16H-208ENST00000557652 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
SUPT16H-208ENST00000557652 MT3P25713 68 aa3.97□□□□□ -1.77
SUPT16H-208ENST00000557652 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
SUPT16H-208ENST00000557652 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
SUPT16H-208ENST00000557652 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
SUPT16H-208ENST00000557652 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
SUPT16H-208ENST00000557652 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
SUPT16H-208ENST00000557652 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
SUPT16H-208ENST00000557652 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
SUPT16H-208ENST00000557652 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
SUPT16H-208ENST00000557652 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
SUPT16H-208ENST00000557652 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
SUPT16H-208ENST00000557652 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
SUPT16H-208ENST00000557652 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
SUPT16H-208ENST00000557652 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
SUPT16H-208ENST00000557652 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
SUPT16H-208ENST00000557652 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
SUPT16H-208ENST00000557652 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
SUPT16H-208ENST00000557652 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
SUPT16H-208ENST00000557652 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
SUPT16H-208ENST00000557652 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
SUPT16H-208ENST00000557652 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
SUPT16H-208ENST00000557652 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
SUPT16H-208ENST00000557652 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
SUPT16H-208ENST00000557652 INE1O15225 51 aa2.99□□□□□ -1.93
SUPT16H-208ENST00000557652 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
SUPT16H-208ENST00000557652 PRM1P04553 51 aa2.68□□□□□ -1.98
SUPT16H-208ENST00000557652 PHGR1C9JFL3 82 aa2.53□□□□□ -2
SUPT16H-208ENST00000557652 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SUPT16H-208ENST00000557652 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
SUPT16H-208ENST00000557652 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 87.7 ms