RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 TRPM2O94759 1503 aa-1.98□□□□□ -2.73
LINC00871-203ENST00000556869 CEP250Q9BV73 2442 aa-1.99□□□□□ -2.73
LINC00871-203ENST00000556869 NRXN3Q9Y4C0 1643 aa-2□□□□□ -2.73
LINC00871-203ENST00000556869 NFAT5O94916 1531 aa-2.02□□□□□ -2.73
LINC00871-203ENST00000556869 ADCY10Q96PN6 1610 aa-2.02□□□□□ -2.73
LINC00871-203ENST00000556869 WDFY3Q8IZQ1 3526 aa-2.03□□□□□ -2.73
LINC00871-203ENST00000556869 ABCC8Q09428 1581 aa-2.03□□□□□ -2.73
LINC00871-203ENST00000556869 PCNTO95613 3336 aa-2.04□□□□□ -2.74
LINC00871-203ENST00000556869 CMC2Q9NRP2 79 aa-2.06□□□□□ -2.74
LINC00871-203ENST00000556869 FRYLO94915 3013 aa-2.07□□□□□ -2.74
LINC00871-203ENST00000556869 FANCD2Q9BXW9 1451 aa-2.07□□□□□ -2.74
LINC00871-203ENST00000556869 NDUFA1O15239 70 aa-2.09□□□□□ -2.74
LINC00871-203ENST00000556869 SPEGQ15772 3267 aa-2.09□□□□□ -2.74
LINC00871-203ENST00000556869 CEP350Q5VT06 3117 aa-2.14□□□□□ -2.75
LINC00871-203ENST00000556869 DMDP11532 3685 aa-2.14□□□□□ -2.75
LINC00871-203ENST00000556869 TOMM7Q9P0U1 55 aa-2.15□□□□□ -2.75
LINC00871-203ENST00000556869 SZT2Q5T011 3432 aa-2.18□□□□□ -2.76
LINC00871-203ENST00000556869 SMIM31A0A1B0GVY4 71 aa-2.19□□□□□ -2.76
LINC00871-203ENST00000556869 TTTY10Q9BZA0 68 aa-2.19□□□□□ -2.76
LINC00871-203ENST00000556869 LINC01590Q5TEZ4 76 aa-2.2□□□□□ -2.76
LINC00871-203ENST00000556869 RHPN1-AS1Q9BWJ2 59 aa-2.2□□□□□ -2.76
LINC00871-203ENST00000556869 WDFY4Q6ZS81 3184 aa-2.23□□□□□ -2.77
LINC00871-203ENST00000556869 DEFB133Q30KQ1 61 aa-2.24□□□□□ -2.77
LINC00871-203ENST00000556869 CENPEQ02224 2701 aa-2.27□□□□□ -2.77
LINC00871-203ENST00000556869 EP400Q96L91 3159 aa-2.29□□□□□ -2.78
LINC00871-203ENST00000556869 ERICH3Q5RHP9 1530 aa-2.3□□□□□ -2.78
LINC00871-203ENST00000556869 A0A096LNI7 61 aa-2.31□□□□□ -2.78
LINC00871-203ENST00000556869 HTN1P15515 57 aa-2.31□□□□□ -2.78
LINC00871-203ENST00000556869 DUOX1Q9NRD9 1551 aa-2.34□□□□□ -2.78
LINC00871-203ENST00000556869 DCHS1Q96JQ0 3298 aa-2.34□□□□□ -2.78
LINC00871-203ENST00000556869 MUC3AQ02505 3323 aa-2.36□□□□□ -2.79
LINC00871-203ENST00000556869 CD52P31358 61 aa-2.37□□□□□ -2.79
LINC00871-203ENST00000556869 SAMD9LQ8IVG5 1584 aa-2.37□□□□□ -2.79
LINC00871-203ENST00000556869 RPL39P62891 51 aaKnown RBP-2.39□□□□□ -2.79
LINC00871-203ENST00000556869 XIRP2A4UGR9 3374 aa-2.41□□□□□ -2.79
LINC00871-203ENST00000556869 SNRPGP15A8MWD9 76 aa-2.41□□□□□ -2.8
LINC00871-203ENST00000556869 MKI67P46013 3256 aaKnown RBP-2.44□□□□□ -2.8
LINC00871-203ENST00000556869 TOP2AP11388 1531 aaKnown RBP-2.46□□□□□ -2.8
LINC00871-203ENST00000556869 DEFB124Q8NES8 71 aa-2.46□□□□□ -2.8
LINC00871-203ENST00000556869 DNAH12Q6ZR08 3092 aa-2.46□□□□□ -2.8
LINC00871-203ENST00000556869 USP34Q70CQ2 3546 aa-2.46□□□□□ -2.8
LINC00871-203ENST00000556869 DNAH14Q0VDD8 3507 aa-2.48□□□□□ -2.81
LINC00871-203ENST00000556869 RPL39LQ96EH5 51 aaKnown RBP-2.49□□□□□ -2.81
LINC00871-203ENST00000556869 IQGAP2Q13576 1575 aa-2.5□□□□□ -2.81
LINC00871-203ENST00000556869 MROH2BQ7Z745 1585 aa-2.53□□□□□ -2.81
LINC00871-203ENST00000556869 LOC400499M0QZD8 3231 aa-2.53□□□□□ -2.81
LINC00871-203ENST00000556869 ATP7AQ04656 1500 aa-2.54□□□□□ -2.82
LINC00871-203ENST00000556869 CFAP47Q6ZTR5 3102 aa-2.54□□□□□ -2.82
LINC00871-203ENST00000556869 UNC80Q8N2C7 3258 aa-2.55□□□□□ -2.82
LINC00871-203ENST00000556869 KRTAP19-2Q3LHN2 52 aa-2.56□□□□□ -2.82
LINC00871-203ENST00000556869 TOMM5Q8N4H5 51 aa-2.58□□□□□ -2.82
LINC00871-203ENST00000556869 DEFB104AQ8WTQ1 72 aa-2.59□□□□□ -2.82
LINC00871-203ENST00000556869 ASPMQ8IZT6 3477 aa-2.64□□□□□ -2.83
LINC00871-203ENST00000556869 VCANP13611 3396 aa-2.7□□□□□ -2.84
LINC00871-203ENST00000556869 H3BUX3 64 aa-2.7□□□□□ -2.84
LINC00871-203ENST00000556869 LINC01556Q5JQF7 62 aa-2.7□□□□□ -2.84
LINC00871-203ENST00000556869 BRCA2P51587 3418 aa-2.71□□□□□ -2.84
LINC00871-203ENST00000556869 CENPFP49454 3210 aa-2.81□□□□□ -2.86
LINC00871-203ENST00000556869 K7EIM0 57 aa-2.86□□□□□ -2.87
LINC00871-203ENST00000556869 CDH23Q9H251 3354 aa-2.88□□□□□ -2.87
LINC00871-203ENST00000556869 ARHGAP5-AS1Q96IT6 56 aa-2.94□□□□□ -2.88
LINC00871-203ENST00000556869 APELAP0DMC3 54 aa-2.98□□□□□ -2.89
LINC00871-203ENST00000556869 VPS13AQ96RL7 3174 aa-2.98□□□□□ -2.89
LINC00871-203ENST00000556869 A0A096LPF7 62 aa-3.01□□□□□ -2.89
LINC00871-203ENST00000556869 PRCDQ00LT1 54 aa-3.02□□□□□ -2.89
LINC00871-203ENST00000556869 GCC2Q8IWJ2 1684 aa-3.03□□□□□ -2.89
LINC00871-203ENST00000556869 TMEM167AQ8TBQ9 72 aa-3.08□□□□□ -2.9
LINC00871-203ENST00000556869 SNRPGP62308 76 aaKnown RBP-3.13□□□□□ -2.91
LINC00871-203ENST00000556869 HTN3P15516 51 aa-3.21□□□□□ -2.92
LINC00871-203ENST00000556869 UTRNP46939 3433 aa-3.21□□□□□ -2.92
LINC00871-203ENST00000556869 RPL39P5Q59GN2 51 aa-3.29□□□□□ -2.94
LINC00871-203ENST00000556869 H3BSH0 61 aa-3.35□□□□□ -2.95
LINC00871-203ENST00000556869 DEFB108AA8MXU0 73 aa-3.36□□□□□ -2.95
LINC00871-203ENST00000556869 Q9Y3F1 56 aa-3.36□□□□□ -2.95
LINC00871-203ENST00000556869 GOLGB1Q14789 3259 aaKnown RBP-3.58□□□□□ -2.98
LINC00871-203ENST00000556869 COX14Q96I36 57 aa-3.64□□□□□ -2.99
LINC00871-203ENST00000556869 DEFB108BQ8NET1 73 aa-3.73□□□□□ -3.01
LINC00871-203ENST00000556869 STATHP02808 62 aa-4.25□□□□□ -3.09
Retrieved 78 of 20,778 RNA–protein pairs in 35.6 ms