RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
SLIRP-207ENST00000556831 CAMK2N1Q7Z7J9 78 aa5.75□□□□□ -1.49
SLIRP-207ENST00000556831 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
SLIRP-207ENST00000556831 SPRR2FQ96RM1 72 aa5.68□□□□□ -1.5
SLIRP-207ENST00000556831 SPRR2DP22532 72 aa5.67□□□□□ -1.5
SLIRP-207ENST00000556831 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
SLIRP-207ENST00000556831 SPINT4Q6UDR6 99 aa5.67□□□□□ -1.5
SLIRP-207ENST00000556831 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
SLIRP-207ENST00000556831 DSTQ03001 7570 aaKnown RBP5.64□□□□□ -1.51
SLIRP-207ENST00000556831 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
SLIRP-207ENST00000556831 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
SLIRP-207ENST00000556831 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
SLIRP-207ENST00000556831 LCE1AQ5T7P2 110 aa5.59□□□□□ -1.51
SLIRP-207ENST00000556831 HMCN1Q96RW7 5635 aa5.54□□□□□ -1.52
SLIRP-207ENST00000556831 KRTAP4-2Q9BYR5 136 aa5.54□□□□□ -1.52
SLIRP-207ENST00000556831 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
SLIRP-207ENST00000556831 KRTAP5-10Q6L8G5 202 aa5.46□□□□□ -1.54
SLIRP-207ENST00000556831 KRTAP5-7Q6L8G8 165 aa5.44□□□□□ -1.54
SLIRP-207ENST00000556831 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
SLIRP-207ENST00000556831 KRTAP19-4Q3LI73 84 aa5.42□□□□□ -1.54
SLIRP-207ENST00000556831 C10orf95Q9H7T3 257 aa5.39□□□□□ -1.55
SLIRP-207ENST00000556831 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
SLIRP-207ENST00000556831 H3BS24 57 aa5.31□□□□□ -1.56
SLIRP-207ENST00000556831 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
SLIRP-207ENST00000556831 TNP1P09430 55 aa5.3□□□□□ -1.56
SLIRP-207ENST00000556831 LCE4AQ5TA78 99 aa5.3□□□□□ -1.56
SLIRP-207ENST00000556831 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
SLIRP-207ENST00000556831 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
SLIRP-207ENST00000556831 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
SLIRP-207ENST00000556831 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
SLIRP-207ENST00000556831 MT1EP04732 61 aa5.22□□□□□ -1.57
SLIRP-207ENST00000556831 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
SLIRP-207ENST00000556831 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
SLIRP-207ENST00000556831 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
SLIRP-207ENST00000556831 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
SLIRP-207ENST00000556831 MT1GP13640 62 aa5.07□□□□□ -1.6
SLIRP-207ENST00000556831 LUZP6Q538Z0 58 aa5.06□□□□□ -1.6
SLIRP-207ENST00000556831 AHNAKQ09666 5890 aaKnown RBP5.06□□□□□ -1.6
SLIRP-207ENST00000556831 NDUFAF8A1L188 74 aa5.04□□□□□ -1.6
SLIRP-207ENST00000556831 MT1LQ93083 61 aa5.01□□□□□ -1.61
SLIRP-207ENST00000556831 MT4P47944 62 aa4.99□□□□□ -1.61
SLIRP-207ENST00000556831 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
SLIRP-207ENST00000556831 MT1MQ8N339 61 aa4.96□□□□□ -1.62
SLIRP-207ENST00000556831 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
SLIRP-207ENST00000556831 MUC5BQ9HC84 5762 aaPredicted RBP4.84□□□□□ -1.63
SLIRP-207ENST00000556831 MUC5ACP98088 5654 aa4.84□□□□□ -1.63
SLIRP-207ENST00000556831 A0A0A0MQY5 61 aa4.76□□□□□ -1.65
SLIRP-207ENST00000556831 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
SLIRP-207ENST00000556831 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
SLIRP-207ENST00000556831 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
SLIRP-207ENST00000556831 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
SLIRP-207ENST00000556831 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
SLIRP-207ENST00000556831 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
SLIRP-207ENST00000556831 INE1O15225 51 aa4.36□□□□□ -1.71
SLIRP-207ENST00000556831 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
SLIRP-207ENST00000556831 KRTAP5-8O75690 187 aa4.3□□□□□ -1.72
SLIRP-207ENST00000556831 MT1AP04731 61 aa4.28□□□□□ -1.72
SLIRP-207ENST00000556831 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
SLIRP-207ENST00000556831 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
SLIRP-207ENST00000556831 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
SLIRP-207ENST00000556831 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
SLIRP-207ENST00000556831 MT3P25713 68 aa3.94□□□□□ -1.78
SLIRP-207ENST00000556831 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
SLIRP-207ENST00000556831 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
SLIRP-207ENST00000556831 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
SLIRP-207ENST00000556831 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
SLIRP-207ENST00000556831 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
SLIRP-207ENST00000556831 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
SLIRP-207ENST00000556831 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
SLIRP-207ENST00000556831 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
SLIRP-207ENST00000556831 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
SLIRP-207ENST00000556831 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
SLIRP-207ENST00000556831 PRM1P04553 51 aa3.03□□□□□ -1.92
SLIRP-207ENST00000556831 LCE1FQ5T754 118 aa3□□□□□ -1.93
SLIRP-207ENST00000556831 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
SLIRP-207ENST00000556831 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
SLIRP-207ENST00000556831 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
SLIRP-207ENST00000556831 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms