RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 KRTAP10-12P60413 245 aa2.52□□□□□ -2.01
TMEM260-209ENST00000556079 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
TMEM260-209ENST00000556079 COA5Q86WW8 74 aa2.51□□□□□ -2.01
TMEM260-209ENST00000556079 SPANXA2-OT1Q8N9U9 137 aa2.5□□□□□ -2.01
TMEM260-209ENST00000556079 SPTSSBQ8NFR3 76 aa2.5□□□□□ -2.01
TMEM260-209ENST00000556079 A0A0D9SG42 100 aa2.48□□□□□ -2.01
TMEM260-209ENST00000556079 PMAIP1Q13794 54 aa2.48□□□□□ -2.01
TMEM260-209ENST00000556079 SPATA8Q6RVD6 105 aa2.47□□□□□ -2.01
TMEM260-209ENST00000556079 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
TMEM260-209ENST00000556079 COX7CP15954 63 aa2.46□□□□□ -2.02
TMEM260-209ENST00000556079 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
TMEM260-209ENST00000556079 H7BZZ5 65 aa2.44□□□□□ -2.02
TMEM260-209ENST00000556079 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
TMEM260-209ENST00000556079 SERP1Q9Y6X1 66 aa2.44□□□□□ -2.02
TMEM260-209ENST00000556079 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
TMEM260-209ENST00000556079 ATP5EP56381 51 aaPredicted RBP2.42□□□□□ -2.02
TMEM260-209ENST00000556079 KRTAP12-1P59990 96 aa2.41□□□□□ -2.02
TMEM260-209ENST00000556079 KRTAP19-7Q3SYF9 63 aa2.41□□□□□ -2.02
TMEM260-209ENST00000556079 BRK1Q8WUW1 75 aa2.41□□□□□ -2.02
TMEM260-209ENST00000556079 A8MU10 97 aa2.4□□□□□ -2.03
TMEM260-209ENST00000556079 LCE3CQ5T5A8 94 aa2.4□□□□□ -2.03
TMEM260-209ENST00000556079 SPINT4Q6UDR6 99 aa2.4□□□□□ -2.03
TMEM260-209ENST00000556079 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
TMEM260-209ENST00000556079 MT1EP04732 61 aa2.39□□□□□ -2.03
TMEM260-209ENST00000556079 A0A1B0GU33 70 aa2.38□□□□□ -2.03
TMEM260-209ENST00000556079 KTN1-AS1Q86SY8 53 aa2.38□□□□□ -2.03
TMEM260-209ENST00000556079 KRTAP19-5Q3LI72 72 aa2.37□□□□□ -2.03
TMEM260-209ENST00000556079 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
TMEM260-209ENST00000556079 A0A1B0GU69 56 aa2.33□□□□□ -2.04
TMEM260-209ENST00000556079 K7ERS5 55 aa2.33□□□□□ -2.04
TMEM260-209ENST00000556079 KRTAP5-4Q6L8H1 288 aa2.33□□□□□ -2.04
TMEM260-209ENST00000556079 KRTAP19-3Q7Z4W3 81 aa2.33□□□□□ -2.04
TMEM260-209ENST00000556079 C10orf95Q9H7T3 257 aa2.32□□□□□ -2.04
TMEM260-209ENST00000556079 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
TMEM260-209ENST00000556079 KRTAP4-3Q9BYR4 195 aa2.31□□□□□ -2.04
TMEM260-209ENST00000556079 MT4P47944 62 aa2.3□□□□□ -2.04
TMEM260-209ENST00000556079 A6NED7 52 aa2.28□□□□□ -2.04
TMEM260-209ENST00000556079 Q1T7F1 81 aa2.28□□□□□ -2.04
TMEM260-209ENST00000556079 MT1LQ93083 61 aa2.28□□□□□ -2.04
TMEM260-209ENST00000556079 MT1MQ8N339 61 aa2.27□□□□□ -2.05
TMEM260-209ENST00000556079 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
TMEM260-209ENST00000556079 LINC01558Q9Y6Z2 57 aa2.25□□□□□ -2.05
TMEM260-209ENST00000556079 MT1GP13640 62 aa2.24□□□□□ -2.05
TMEM260-209ENST00000556079 TNP1P09430 55 aa2.21□□□□□ -2.06
TMEM260-209ENST00000556079 PRR15LQ9BU68 103 aa2.21□□□□□ -2.06
TMEM260-209ENST00000556079 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
TMEM260-209ENST00000556079 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
TMEM260-209ENST00000556079 PP632Q6XCG6 107 aa2.18□□□□□ -2.06
TMEM260-209ENST00000556079 CDC42SE1Q9NRR8 79 aa2.18□□□□□ -2.06
TMEM260-209ENST00000556079 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
TMEM260-209ENST00000556079 UQCR11O14957 56 aa2.15□□□□□ -2.07
TMEM260-209ENST00000556079 KRTAP25-1Q3LHN0 102 aa2.15□□□□□ -2.07
TMEM260-209ENST00000556079 MIR22HGQ0VDD5 57 aa2.14□□□□□ -2.07
TMEM260-209ENST00000556079 SYNE1Q8NF91 8797 aaKnown RBP2.14□□□□□ -2.07
TMEM260-209ENST00000556079 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
TMEM260-209ENST00000556079 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
TMEM260-209ENST00000556079 KRTAP20-2Q3LI61 65 aa2.08□□□□□ -2.08
TMEM260-209ENST00000556079 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
TMEM260-209ENST00000556079 ROMO1P60602 79 aa2.06□□□□□ -2.08
TMEM260-209ENST00000556079 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
TMEM260-209ENST00000556079 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
TMEM260-209ENST00000556079 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
TMEM260-209ENST00000556079 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
TMEM260-209ENST00000556079 KRTAP6-1Q3LI64 71 aa1.96□□□□□ -2.1
TMEM260-209ENST00000556079 MT1AP04731 61 aa1.92□□□□□ -2.1
TMEM260-209ENST00000556079 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
TMEM260-209ENST00000556079 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
TMEM260-209ENST00000556079 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
TMEM260-209ENST00000556079 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
TMEM260-209ENST00000556079 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
TMEM260-209ENST00000556079 LCE3DQ9BYE3 92 aa1.74□□□□□ -2.13
TMEM260-209ENST00000556079 INE1O15225 51 aa1.66□□□□□ -2.14
TMEM260-209ENST00000556079 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
TMEM260-209ENST00000556079 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
TMEM260-209ENST00000556079 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
TMEM260-209ENST00000556079 PRM1P04553 51 aa1.05□□□□□ -2.24
TMEM260-209ENST00000556079 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
TMEM260-209ENST00000556079 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 60.4 ms