RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
PSEN1-216ENST00000556066 KMT2DO14686 5537 aa3.03□□□□□ -1.93
PSEN1-216ENST00000556066 A0A1B0GU69 56 aa3.01□□□□□ -1.93
PSEN1-216ENST00000556066 MT1BP07438 61 aa3□□□□□ -1.93
PSEN1-216ENST00000556066 PRO2289Q9P1D8 64 aa3□□□□□ -1.93
PSEN1-216ENST00000556066 SPRR2GQ9BYE4 73 aa2.99□□□□□ -1.93
PSEN1-216ENST00000556066 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
PSEN1-216ENST00000556066 R4GN34 69 aa2.98□□□□□ -1.93
PSEN1-216ENST00000556066 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
PSEN1-216ENST00000556066 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
PSEN1-216ENST00000556066 SPATA8Q6RVD6 105 aa2.94□□□□□ -1.94
PSEN1-216ENST00000556066 KRTAP2-3P0C7H8 128 aa2.93□□□□□ -1.94
PSEN1-216ENST00000556066 KRTAP2-4Q9BYR9 128 aa2.93□□□□□ -1.94
PSEN1-216ENST00000556066 UQCR11O14957 56 aa2.92□□□□□ -1.94
PSEN1-216ENST00000556066 CRIPTQ9P021 101 aa2.92□□□□□ -1.94
PSEN1-216ENST00000556066 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
PSEN1-216ENST00000556066 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
PSEN1-216ENST00000556066 H0YAA0 97 aa2.87□□□□□ -1.95
PSEN1-216ENST00000556066 KRTAP10-12P60413 245 aa2.86□□□□□ -1.95
PSEN1-216ENST00000556066 KRTAP13-4Q3LI77 160 aa2.83□□□□□ -1.96
PSEN1-216ENST00000556066 PLAC4Q8WY50 150 aa2.83□□□□□ -1.96
PSEN1-216ENST00000556066 KRTAP2-1Q9BYU5 128 aa2.82□□□□□ -1.96
PSEN1-216ENST00000556066 SPRR2FQ96RM1 72 aa2.81□□□□□ -1.96
PSEN1-216ENST00000556066 SPRR2EP22531 72 aa2.8□□□□□ -1.96
PSEN1-216ENST00000556066 SPRR2BP35325 72 aa2.8□□□□□ -1.96
PSEN1-216ENST00000556066 SPRR2AP35326 72 aa2.8□□□□□ -1.96
PSEN1-216ENST00000556066 MT1XP80297 61 aa2.8□□□□□ -1.96
PSEN1-216ENST00000556066 M0QZ58 72 aa2.79□□□□□ -1.96
PSEN1-216ENST00000556066 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
PSEN1-216ENST00000556066 A0A0D9SG42 100 aa2.78□□□□□ -1.96
PSEN1-216ENST00000556066 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
PSEN1-216ENST00000556066 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
PSEN1-216ENST00000556066 LCE3CQ5T5A8 94 aa2.74□□□□□ -1.97
PSEN1-216ENST00000556066 INE1O15225 51 aa2.73□□□□□ -1.97
PSEN1-216ENST00000556066 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
PSEN1-216ENST00000556066 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
PSEN1-216ENST00000556066 SPRR2DP22532 72 aa2.7□□□□□ -1.98
PSEN1-216ENST00000556066 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
PSEN1-216ENST00000556066 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
PSEN1-216ENST00000556066 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
PSEN1-216ENST00000556066 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
PSEN1-216ENST00000556066 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
PSEN1-216ENST00000556066 LCE3AQ5TA76 89 aa2.52□□□□□ -2.01
PSEN1-216ENST00000556066 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
PSEN1-216ENST00000556066 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
PSEN1-216ENST00000556066 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
PSEN1-216ENST00000556066 MT1EP04732 61 aa2.48□□□□□ -2.01
PSEN1-216ENST00000556066 KRTAP19-3Q7Z4W3 81 aa2.48□□□□□ -2.01
PSEN1-216ENST00000556066 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
PSEN1-216ENST00000556066 KRTAP19-5Q3LI72 72 aa2.44□□□□□ -2.02
PSEN1-216ENST00000556066 TNP1P09430 55 aa2.43□□□□□ -2.02
PSEN1-216ENST00000556066 MT1GP13640 62 aa2.41□□□□□ -2.02
PSEN1-216ENST00000556066 MT4P47944 62 aa2.4□□□□□ -2.03
PSEN1-216ENST00000556066 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
PSEN1-216ENST00000556066 MT1MQ8N339 61 aa2.38□□□□□ -2.03
PSEN1-216ENST00000556066 MT1LQ93083 61 aa2.37□□□□□ -2.03
PSEN1-216ENST00000556066 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
PSEN1-216ENST00000556066 KRTAP12-3P60328 96 aa2.26□□□□□ -2.05
PSEN1-216ENST00000556066 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
PSEN1-216ENST00000556066 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
PSEN1-216ENST00000556066 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
PSEN1-216ENST00000556066 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
PSEN1-216ENST00000556066 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
PSEN1-216ENST00000556066 KRTAP20-2Q3LI61 65 aa2.2□□□□□ -2.06
PSEN1-216ENST00000556066 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
PSEN1-216ENST00000556066 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
PSEN1-216ENST00000556066 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
PSEN1-216ENST00000556066 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
PSEN1-216ENST00000556066 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
PSEN1-216ENST00000556066 MT1AP04731 61 aa2.01□□□□□ -2.09
PSEN1-216ENST00000556066 KRTAP6-1Q3LI64 71 aa2.01□□□□□ -2.09
PSEN1-216ENST00000556066 KRTAP6-2Q3LI66 62 aa1.94□□□□□ -2.1
PSEN1-216ENST00000556066 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
PSEN1-216ENST00000556066 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
PSEN1-216ENST00000556066 PRM1P04553 51 aa1.43□□□□□ -2.18
PSEN1-216ENST00000556066 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
PSEN1-216ENST00000556066 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
PSEN1-216ENST00000556066 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 136.7 ms