RNA–Protein interactions for RNA: ENST00000555176.5

HNRNPC-217, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-217ENST00000555176 MDN1Q9NU22 5596 aa1.72□□□□□ -2.13
HNRNPC-217ENST00000555176 C10orf95Q9H7T3 257 aa1.71□□□□□ -2.14
HNRNPC-217ENST00000555176 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
HNRNPC-217ENST00000555176 KRTAP13-4Q3LI77 160 aa1.7□□□□□ -2.14
HNRNPC-217ENST00000555176 PP632Q6XCG6 107 aa1.7□□□□□ -2.14
HNRNPC-217ENST00000555176 KRTAP2-3P0C7H8 128 aa1.69□□□□□ -2.14
HNRNPC-217ENST00000555176 KRTAP12-1P59990 96 aa1.69□□□□□ -2.14
HNRNPC-217ENST00000555176 KRTAP12-2P59991 146 aa1.69□□□□□ -2.14
HNRNPC-217ENST00000555176 KRTAP2-4Q9BYR9 128 aa1.69□□□□□ -2.14
HNRNPC-217ENST00000555176 MT1HL1P0DM35 61 aa1.68□□□□□ -2.14
HNRNPC-217ENST00000555176 KRTAP10-12P60413 245 aa1.68□□□□□ -2.14
HNRNPC-217ENST00000555176 PLAC4Q8WY50 150 aa1.68□□□□□ -2.14
HNRNPC-217ENST00000555176 R4GN34 69 aa1.67□□□□□ -2.14
HNRNPC-217ENST00000555176 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
HNRNPC-217ENST00000555176 CAMK2N1Q7Z7J9 78 aa1.63□□□□□ -2.15
HNRNPC-217ENST00000555176 KRTAP10-4P60372 401 aaPredicted RBP1.61□□□□□ -2.15
HNRNPC-217ENST00000555176 KRTAP2-1Q9BYU5 128 aa1.61□□□□□ -2.15
HNRNPC-217ENST00000555176 KRTAP10-8P60410 259 aa1.6□□□□□ -2.15
HNRNPC-217ENST00000555176 LCE1FQ5T754 118 aa1.6□□□□□ -2.15
HNRNPC-217ENST00000555176 SPRR5A0A1B0GTR4 108 aa1.59□□□□□ -2.15
HNRNPC-217ENST00000555176 DSTQ03001 7570 aaKnown RBP1.59□□□□□ -2.16
HNRNPC-217ENST00000555176 FLGP20930 4061 aaPredicted RBP1.58□□□□□ -2.16
HNRNPC-217ENST00000555176 TNP1P09430 55 aa1.58□□□□□ -2.16
HNRNPC-217ENST00000555176 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
HNRNPC-217ENST00000555176 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
HNRNPC-217ENST00000555176 INE1O15225 51 aa1.54□□□□□ -2.16
HNRNPC-217ENST00000555176 LCE3AQ5TA76 89 aa1.54□□□□□ -2.16
HNRNPC-217ENST00000555176 PRO2289Q9P1D8 64 aa1.54□□□□□ -2.16
HNRNPC-217ENST00000555176 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
HNRNPC-217ENST00000555176 MUC17Q685J3 4493 aa1.53□□□□□ -2.16
HNRNPC-217ENST00000555176 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
HNRNPC-217ENST00000555176 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
HNRNPC-217ENST00000555176 LCE3CQ5T5A8 94 aa1.5□□□□□ -2.17
HNRNPC-217ENST00000555176 MT1HP80294 61 aa1.48□□□□□ -2.17
HNRNPC-217ENST00000555176 KRTAP19-6Q3LI70 58 aa1.45□□□□□ -2.18
HNRNPC-217ENST00000555176 KRTAP5-5Q701N2 237 aaPredicted RBP1.43□□□□□ -2.18
HNRNPC-217ENST00000555176 M0R2T5 61 aa1.42□□□□□ -2.18
HNRNPC-217ENST00000555176 LCE1CQ5T751 118 aa1.41□□□□□ -2.18
HNRNPC-217ENST00000555176 LCE1BQ5T7P3 118 aa1.41□□□□□ -2.18
HNRNPC-217ENST00000555176 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
HNRNPC-217ENST00000555176 SPRR2EP22531 72 aa1.38□□□□□ -2.19
HNRNPC-217ENST00000555176 SPRR2BP35325 72 aa1.38□□□□□ -2.19
HNRNPC-217ENST00000555176 SPRR2AP35326 72 aa1.38□□□□□ -2.19
HNRNPC-217ENST00000555176 KRTAP19-2Q3LHN2 52 aa1.38□□□□□ -2.19
HNRNPC-217ENST00000555176 SPRR2GQ9BYE4 73 aa1.38□□□□□ -2.19
HNRNPC-217ENST00000555176 KRTAP4-1Q9BYQ7 146 aa1.38□□□□□ -2.19
HNRNPC-217ENST00000555176 KRTAP8-1Q8IUC2 63 aa1.37□□□□□ -2.19
HNRNPC-217ENST00000555176 LCE3EQ5T5B0 92 aa1.36□□□□□ -2.19
HNRNPC-217ENST00000555176 SPRR2DP22532 72 aa1.34□□□□□ -2.19
HNRNPC-217ENST00000555176 KRTAP12-3P60328 96 aa1.34□□□□□ -2.19
HNRNPC-217ENST00000555176 KRTAP10-10P60014 251 aa1.31□□□□□ -2.2
HNRNPC-217ENST00000555176 KRTAP19-8Q3LI54 63 aa1.3□□□□□ -2.2
HNRNPC-217ENST00000555176 SPRR2FQ96RM1 72 aa1.27□□□□□ -2.21
HNRNPC-217ENST00000555176 MT2AP02795 61 aa1.25□□□□□ -2.21
HNRNPC-217ENST00000555176 MT1XP80297 61 aa1.25□□□□□ -2.21
HNRNPC-217ENST00000555176 MT1FP04733 61 aa1.24□□□□□ -2.21
HNRNPC-217ENST00000555176 MT4P47944 62 aa1.23□□□□□ -2.21
HNRNPC-217ENST00000555176 MUC19Q7Z5P9 8384 aa1.22□□□□□ -2.21
HNRNPC-217ENST00000555176 MT1BP07438 61 aa1.22□□□□□ -2.21
HNRNPC-217ENST00000555176 KRTAP19-5Q3LI72 72 aa1.2□□□□□ -2.22
HNRNPC-217ENST00000555176 LCE3DQ9BYE3 92 aa1.16□□□□□ -2.22
HNRNPC-217ENST00000555176 MT1LQ93083 61 aa1.11□□□□□ -2.23
HNRNPC-217ENST00000555176 MT1EP04732 61 aa1.1□□□□□ -2.23
HNRNPC-217ENST00000555176 KRTAP19-7Q3SYF9 63 aa1.1□□□□□ -2.23
HNRNPC-217ENST00000555176 KRTAP12-4P60329 112 aa1.09□□□□□ -2.23
HNRNPC-217ENST00000555176 SYNE1Q8NF91 8797 aaKnown RBP1.04□□□□□ -2.24
HNRNPC-217ENST00000555176 MT1GP13640 62 aa1.04□□□□□ -2.24
HNRNPC-217ENST00000555176 MT1AP04731 61 aa1.03□□□□□ -2.24
HNRNPC-217ENST00000555176 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
HNRNPC-217ENST00000555176 KRTAP19-3Q7Z4W3 81 aa1.03□□□□□ -2.24
HNRNPC-217ENST00000555176 MT1MQ8N339 61 aa1.02□□□□□ -2.25
HNRNPC-217ENST00000555176 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
HNRNPC-217ENST00000555176 PRM1P04553 51 aa0.99□□□□□ -2.25
HNRNPC-217ENST00000555176 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
HNRNPC-217ENST00000555176 KRTAP6-1Q3LI64 71 aa0.91□□□□□ -2.26
HNRNPC-217ENST00000555176 KRTAP6-2Q3LI66 62 aa0.91□□□□□ -2.26
HNRNPC-217ENST00000555176 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
HNRNPC-217ENST00000555176 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms