RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 SPRR2FQ96RM1 72 aa0.34□□□□□ -2.36
KTN1-220ENST00000555172 BOD1L1Q8NFC6 3051 aa0.33□□□□□ -2.36
KTN1-220ENST00000555172 DNAH10Q8IVF4 4471 aa0.32□□□□□ -2.36
KTN1-220ENST00000555172 A0A096LNI7 61 aa0.32□□□□□ -2.36
KTN1-220ENST00000555172 TRRAPQ9Y4A5 3859 aa0.31□□□□□ -2.36
KTN1-220ENST00000555172 DCHS1Q96JQ0 3298 aa0.3□□□□□ -2.36
KTN1-220ENST00000555172 VPS13CQ709C8 3753 aa0.29□□□□□ -2.36
KTN1-220ENST00000555172 TMEM167AQ8TBQ9 72 aa0.27□□□□□ -2.37
KTN1-220ENST00000555172 FREM2Q5SZK8 3169 aa0.27□□□□□ -2.37
KTN1-220ENST00000555172 PLECQ15149 4684 aaKnown RBP0.27□□□□□ -2.37
KTN1-220ENST00000555172 CEP350Q5VT06 3117 aa0.27□□□□□ -2.37
KTN1-220ENST00000555172 DEFB1P60022 68 aa0.26□□□□□ -2.37
KTN1-220ENST00000555172 RPL39P5Q59GN2 51 aa0.26□□□□□ -2.37
KTN1-220ENST00000555172 EYSQ5T1H1 3165 aa0.25□□□□□ -2.37
KTN1-220ENST00000555172 PCNTO95613 3336 aa0.25□□□□□ -2.37
KTN1-220ENST00000555172 SPEGQ15772 3267 aa0.25□□□□□ -2.37
KTN1-220ENST00000555172 LAMA2P24043 3122 aaKnown RBP0.25□□□□□ -2.37
KTN1-220ENST00000555172 UNC80Q8N2C7 3258 aa0.25□□□□□ -2.37
KTN1-220ENST00000555172 ASPMQ8IZT6 3477 aa0.23□□□□□ -2.37
KTN1-220ENST00000555172 UTRNP46939 3433 aa0.23□□□□□ -2.37
KTN1-220ENST00000555172 CMYA5Q8N3K9 4069 aa0.23□□□□□ -2.37
KTN1-220ENST00000555172 EP400Q96L91 3159 aa0.23□□□□□ -2.37
KTN1-220ENST00000555172 LOC400499M0QZD8 3231 aa0.23□□□□□ -2.37
KTN1-220ENST00000555172 DEFB108AA8MXU0 73 aa0.23□□□□□ -2.37
KTN1-220ENST00000555172 MYO15AQ9UKN7 3530 aa0.22□□□□□ -2.37
KTN1-220ENST00000555172 ITPR2Q14571 2701 aa0.22□□□□□ -2.37
KTN1-220ENST00000555172 BRCA2P51587 3418 aa0.22□□□□□ -2.37
KTN1-220ENST00000555172 NIPBLQ6KC79 2804 aaeCLIP0.22□□□□□ -2.37
KTN1-220ENST00000555172 RHPN1-AS1Q9BWJ2 59 aa0.21□□□□□ -2.38
KTN1-220ENST00000555172 GOLGB1Q14789 3259 aaKnown RBP0.2□□□□□ -2.38
KTN1-220ENST00000555172 USP34Q70CQ2 3546 aa0.2□□□□□ -2.38
KTN1-220ENST00000555172 WDFY3Q8IZQ1 3526 aa0.19□□□□□ -2.38
KTN1-220ENST00000555172 DEFB136Q30KP8 78 aa0.19□□□□□ -2.38
KTN1-220ENST00000555172 VCANP13611 3396 aa0.19□□□□□ -2.38
KTN1-220ENST00000555172 CENPFP49454 3210 aa0.18□□□□□ -2.38
KTN1-220ENST00000555172 VPS13AQ96RL7 3174 aa0.18□□□□□ -2.38
KTN1-220ENST00000555172 SPRR2GQ9BYE4 73 aa0.17□□□□□ -2.38
KTN1-220ENST00000555172 CFAP47Q6ZTR5 3102 aa0.17□□□□□ -2.38
KTN1-220ENST00000555172 DNAH17Q9UFH2 4485 aa0.17□□□□□ -2.38
KTN1-220ENST00000555172 STARD9Q9P2P6 4700 aa0.17□□□□□ -2.38
KTN1-220ENST00000555172 CDH23Q9H251 3354 aa0.17□□□□□ -2.38
KTN1-220ENST00000555172 DYNC1H1Q14204 4646 aaKnown RBP0.17□□□□□ -2.38
KTN1-220ENST00000555172 MUC17Q685J3 4493 aa0.15□□□□□ -2.39
KTN1-220ENST00000555172 APELAP0DMC3 54 aa0.15□□□□□ -2.39
KTN1-220ENST00000555172 DNAH14Q0VDD8 3507 aa0.15□□□□□ -2.39
KTN1-220ENST00000555172 HTN1P15515 57 aa0.14□□□□□ -2.39
KTN1-220ENST00000555172 KRTAP19-6Q3LI70 58 aa0.12□□□□□ -2.39
KTN1-220ENST00000555172 H3BUX3 64 aa0.11□□□□□ -2.39
KTN1-220ENST00000555172 MT1HP80294 61 aa0.11□□□□□ -2.39
KTN1-220ENST00000555172 KRTAP19-7Q3SYF9 63 aa0.1□□□□□ -2.39
KTN1-220ENST00000555172 CENPEQ02224 2701 aa0.09□□□□□ -2.39
KTN1-220ENST00000555172 DNAH5Q8TE73 4624 aa0.08□□□□□ -2.4
KTN1-220ENST00000555172 MT1EP04732 61 aa0.07□□□□□ -2.4
KTN1-220ENST00000555172 MT4P47944 62 aa0.06□□□□□ -2.4
KTN1-220ENST00000555172 DEFB124Q8NES8 71 aa0.06□□□□□ -2.4
KTN1-220ENST00000555172 DEFB133Q30KQ1 61 aa0.05□□□□□ -2.4
KTN1-220ENST00000555172 KRTAP19-8Q3LI54 63 aa0.05□□□□□ -2.4
KTN1-220ENST00000555172 DEFB4AO15263 64 aa0.05□□□□□ -2.4
KTN1-220ENST00000555172 MT1LQ93083 61 aa0.03□□□□□ -2.4
KTN1-220ENST00000555172 STATHP02808 62 aa0.02□□□□□ -2.41
KTN1-220ENST00000555172 A0A096LPF7 62 aa0.01□□□□□ -2.41
KTN1-220ENST00000555172 MT1GP13640 62 aa0.01□□□□□ -2.41
KTN1-220ENST00000555172 KRTAP6-1Q3LI64 71 aa0.01□□□□□ -2.41
KTN1-220ENST00000555172 MT1XP80297 61 aa-0.01□□□□□ -2.41
KTN1-220ENST00000555172 KRTAP20-2Q3LI61 65 aa-0.02□□□□□ -2.41
KTN1-220ENST00000555172 DEFB108BQ8NET1 73 aa-0.03□□□□□ -2.41
KTN1-220ENST00000555172 KRTAP19-2Q3LHN2 52 aa-0.03□□□□□ -2.41
KTN1-220ENST00000555172 MT1BP07438 61 aa-0.04□□□□□ -2.42
KTN1-220ENST00000555172 LINC01556Q5JQF7 62 aa-0.04□□□□□ -2.42
KTN1-220ENST00000555172 MT1MQ8N339 61 aa-0.04□□□□□ -2.42
KTN1-220ENST00000555172 MT2AP02795 61 aa-0.05□□□□□ -2.42
KTN1-220ENST00000555172 MT1FP04733 61 aa-0.06□□□□□ -2.42
KTN1-220ENST00000555172 HTN3P15516 51 aa-0.06□□□□□ -2.42
KTN1-220ENST00000555172 COX14Q96I36 57 aa-0.06□□□□□ -2.42
KTN1-220ENST00000555172 RPS29P62273 56 aaKnown RBP-0.08□□□□□ -2.42
KTN1-220ENST00000555172 MT1HL1P0DM35 61 aa-0.1□□□□□ -2.42
KTN1-220ENST00000555172 CD52P31358 61 aa-0.1□□□□□ -2.43
KTN1-220ENST00000555172 Q9Y3F1 56 aa-0.15□□□□□ -2.43
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms