RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956		Q1T7F1	81 aa		2.08	□□□□□ -2.08
PSMC6-208	ENST00000554956	SPRR2F	Q96RM1	72 aa		2.07	□□□□□ -2.08
PSMC6-208	ENST00000554956	SPRR2E	P22531	72 aa		2.06	□□□□□ -2.08
PSMC6-208	ENST00000554956	SPRR2B	P35325	72 aa		2.06	□□□□□ -2.08
PSMC6-208	ENST00000554956	SPRR2A	P35326	72 aa		2.06	□□□□□ -2.08
PSMC6-208	ENST00000554956	MT1X	P80297	61 aa		2.06	□□□□□ -2.08
PSMC6-208	ENST00000554956	COX7C	P15954	63 aa		2.05	□□□□□ -2.08
PSMC6-208	ENST00000554956	ROMO1	P60602	79 aa		2.05	□□□□□ -2.08
PSMC6-208	ENST00000554956	COA5	Q86WW8	74 aa		2.05	□□□□□ -2.08
PSMC6-208	ENST00000554956	ACYP1	P07311	99 aa		2.03	□□□□□ -2.08
PSMC6-208	ENST00000554956	KRTAP2-1	Q9BYU5	128 aa		2.03	□□□□□ -2.08
PSMC6-208	ENST00000554956	ATOX1	O00244	68 aa		2.02	□□□□□ -2.09
PSMC6-208	ENST00000554956	BRK1	Q8WUW1	75 aa		2.02	□□□□□ -2.09
PSMC6-208	ENST00000554956	CYP4F30P	Q9H0H9	118 aa		2.02	□□□□□ -2.09
PSMC6-208	ENST00000554956	CRIPT	Q9P021	101 aa		2.02	□□□□□ -2.09
PSMC6-208	ENST00000554956	LINC00643	Q86TS7	51 aa		2.01	□□□□□ -2.09
PSMC6-208	ENST00000554956	KRTAP8-1	Q8IUC2	63 aa		2.01	□□□□□ -2.09
PSMC6-208	ENST00000554956	SERP2	Q8N6R1	65 aa		2	□□□□□ -2.09
PSMC6-208	ENST00000554956	SERP1	Q9Y6X1	66 aa		2	□□□□□ -2.09
PSMC6-208	ENST00000554956		H0YAA0	97 aa		1.99	□□□□□ -2.09
PSMC6-208	ENST00000554956	SPRR2D	P22532	72 aa		1.99	□□□□□ -2.09
PSMC6-208	ENST00000554956	UBL5	Q9BZL1	73 aa		1.99	□□□□□ -2.09
PSMC6-208	ENST00000554956	KRTAP13-4	Q3LI77	160 aa		1.98	□□□□□ -2.09
PSMC6-208	ENST00000554956	CYSTM1	Q9H1C7	97 aa		1.98	□□□□□ -2.09
PSMC6-208	ENST00000554956	TP53AIP1	Q9HCN2	124 aa		1.98	□□□□□ -2.09
PSMC6-208	ENST00000554956	NDUFC1	O43677	76 aa		1.96	□□□□□ -2.1
PSMC6-208	ENST00000554956	TRAV22	A0A0B4J277	110 aa		1.95	□□□□□ -2.1
PSMC6-208	ENST00000554956	LOC101927531	A0A1B0GV80	90 aa		1.95	□□□□□ -2.1
PSMC6-208	ENST00000554956	ATP5E	P56381	51 aa	Predicted RBP	1.95	□□□□□ -2.1
PSMC6-208	ENST00000554956	KRTAP12-1	P59990	96 aa		1.94	□□□□□ -2.1
PSMC6-208	ENST00000554956	PLAC4	Q8WY50	150 aa		1.94	□□□□□ -2.1
PSMC6-208	ENST00000554956		H7BZZ5	65 aa		1.93	□□□□□ -2.1
PSMC6-208	ENST00000554956		H0Y9P7	68 aa		1.92	□□□□□ -2.1
PSMC6-208	ENST00000554956	ATP5EP2	Q5VTU8	51 aa		1.92	□□□□□ -2.1
PSMC6-208	ENST00000554956		M0QZ58	72 aa		1.91	□□□□□ -2.1
PSMC6-208	ENST00000554956	C20orf197	Q8N268	126 aa		1.91	□□□□□ -2.1
PSMC6-208	ENST00000554956	CDC42SE1	Q9NRR8	79 aa		1.89	□□□□□ -2.11
PSMC6-208	ENST00000554956	LINC00208	Q96KT6	92 aa		1.88	□□□□□ -2.11
PSMC6-208	ENST00000554956	MIR22HG	Q0VDD5	57 aa		1.87	□□□□□ -2.11
PSMC6-208	ENST00000554956	SNURF	Q9Y675	71 aa		1.86	□□□□□ -2.11
PSMC6-208	ENST00000554956	KRTAP19-7	Q3SYF9	63 aa		1.85	□□□□□ -2.11
PSMC6-208	ENST00000554956	DMAC1	Q96GE9	116 aa		1.84	□□□□□ -2.11
PSMC6-208	ENST00000554956	GPR98	Q8WXG9	6306 aa		1.83	□□□□□ -2.12
PSMC6-208	ENST00000554956	MT1E	P04732	61 aa		1.82	□□□□□ -2.12
PSMC6-208	ENST00000554956	INE1	O15225	51 aa		1.81	□□□□□ -2.12
PSMC6-208	ENST00000554956	KRTAP19-3	Q7Z4W3	81 aa		1.81	□□□□□ -2.12
PSMC6-208	ENST00000554956	DST	Q03001	7570 aa	Known RBP	1.8	□□□□□ -2.12
PSMC6-208	ENST00000554956	CHKB-CPT1B	H3BT56	60 aa		1.77	□□□□□ -2.13
PSMC6-208	ENST00000554956	MT4	P47944	62 aa		1.77	□□□□□ -2.13
PSMC6-208	ENST00000554956	SPTSSB	Q8NFR3	76 aa		1.77	□□□□□ -2.13
PSMC6-208	ENST00000554956	KRTAP19-5	Q3LI72	72 aa		1.76	□□□□□ -2.13
PSMC6-208	ENST00000554956	HMCN1	Q96RW7	5635 aa		1.75	□□□□□ -2.13
PSMC6-208	ENST00000554956	KRTAP5-10	Q6L8G5	202 aa		1.75	□□□□□ -2.13
PSMC6-208	ENST00000554956	PRR15L	Q9BU68	103 aa		1.75	□□□□□ -2.13
PSMC6-208	ENST00000554956	MT1G	P13640	62 aa		1.74	□□□□□ -2.13
PSMC6-208	ENST00000554956	ACYP2	P14621	99 aa		1.74	□□□□□ -2.13
PSMC6-208	ENST00000554956	MT1M	Q8N339	61 aa		1.74	□□□□□ -2.13
PSMC6-208	ENST00000554956	MT1L	Q93083	61 aa		1.73	□□□□□ -2.13
PSMC6-208	ENST00000554956	LINC01558	Q9Y6Z2	57 aa		1.73	□□□□□ -2.13
PSMC6-208	ENST00000554956		A0A0D9SG42	100 aa		1.72	□□□□□ -2.13
PSMC6-208	ENST00000554956	AHNAK2	Q8IVF2	5795 aa		1.69	□□□□□ -2.14
PSMC6-208	ENST00000554956	SPATA8	Q6RVD6	105 aa		1.68	□□□□□ -2.14
PSMC6-208	ENST00000554956	C10orf95	Q9H7T3	257 aa		1.66	□□□□□ -2.14
PSMC6-208	ENST00000554956	KRTAP20-2	Q3LI61	65 aa		1.64	□□□□□ -2.15
PSMC6-208	ENST00000554956		A0A1B0GU69	56 aa		1.59	□□□□□ -2.15
PSMC6-208	ENST00000554956	UQCR11	O14957	56 aa		1.59	□□□□□ -2.15
PSMC6-208	ENST00000554956	TNP1	P09430	55 aa		1.56	□□□□□ -2.16
PSMC6-208	ENST00000554956	SYNE1	Q8NF91	8797 aa	Known RBP	1.53	□□□□□ -2.16
PSMC6-208	ENST00000554956	KRTAP6-1	Q3LI64	71 aa		1.48	□□□□□ -2.17
PSMC6-208	ENST00000554956	MT1A	P04731	61 aa		1.45	□□□□□ -2.18
PSMC6-208	ENST00000554956	MUC5AC	P98088	5654 aa		1.43	□□□□□ -2.18
PSMC6-208	ENST00000554956	KRTAP6-2	Q3LI66	62 aa		1.42	□□□□□ -2.18
PSMC6-208	ENST00000554956	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.41	□□□□□ -2.18
PSMC6-208	ENST00000554956	AHNAK	Q09666	5890 aa	Known RBP	1.4	□□□□□ -2.19
PSMC6-208	ENST00000554956	MUC16	Q8WXI7	14507 aa		1.08	□□□□□ -2.24
PSMC6-208	ENST00000554956	PHGR1	C9JFL3	82 aa		1	□□□□□ -2.25
PSMC6-208	ENST00000554956	PRM1	P04553	51 aa		0.79	□□□□□ -2.28
PSMC6-208	ENST00000554956	KRTAP21-1	Q3LI58	79 aa		0.75	□□□□□ -2.29

Retrieved 78 of 20,778 RNA–protein pairs in 338.8 ms