RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 NMES1Q9C002 83 aa-3.04□□□□□ -2.9
PCNX1-208ENST00000554707 DUOX2Q9NRD8 1548 aa-3.04□□□□□ -2.9
PCNX1-208ENST00000554707 DEFB104AQ8WTQ1 72 aa-3.07□□□□□ -2.9
PCNX1-208ENST00000554707 LMO7Q8WWI1 1683 aa-3.08□□□□□ -2.9
PCNX1-208ENST00000554707 IQGAP3Q86VI3 1631 aa-3.08□□□□□ -2.9
PCNX1-208ENST00000554707 EFCAB6Q5THR3 1501 aa-3.09□□□□□ -2.9
PCNX1-208ENST00000554707 UGGT2Q9NYU1 1516 aa-3.09□□□□□ -2.9
PCNX1-208ENST00000554707 ALS2Q96Q42 1657 aa-3.12□□□□□ -2.91
PCNX1-208ENST00000554707 SCRIBQ14160 1630 aa-3.12□□□□□ -2.91
PCNX1-208ENST00000554707 IGIPA6NJ69 53 aa-3.13□□□□□ -2.91
PCNX1-208ENST00000554707 HTN1P15515 57 aa-3.13□□□□□ -2.91
PCNX1-208ENST00000554707 RHPN1-AS1Q9BWJ2 59 aa-3.13□□□□□ -2.91
PCNX1-208ENST00000554707 CCDC180Q9P1Z9 1646 aa-3.14□□□□□ -2.91
PCNX1-208ENST00000554707 SMCO4Q9NRQ5 59 aa-3.14□□□□□ -2.91
PCNX1-208ENST00000554707 PDCD5O14737 125 aa-3.15□□□□□ -2.91
PCNX1-208ENST00000554707 DEFB131AP59861 70 aa-3.15□□□□□ -2.91
PCNX1-208ENST00000554707 ABCA6Q8N139 1617 aa-3.19□□□□□ -2.92
PCNX1-208ENST00000554707 H0YGX0 51 aa-3.2□□□□□ -2.92
PCNX1-208ENST00000554707 S100ZQ8WXG8 99 aa-3.21□□□□□ -2.92
PCNX1-208ENST00000554707 A0A096LNI7 61 aa-3.23□□□□□ -2.93
PCNX1-208ENST00000554707 SMIM2Q9BVW6 85 aa-3.26□□□□□ -2.93
PCNX1-208ENST00000554707 MROH2AA6NES4 1674 aa-3.27□□□□□ -2.93
PCNX1-208ENST00000554707 GOLGB1Q14789 3259 aaKnown RBP-3.27□□□□□ -2.93
PCNX1-208ENST00000554707 NFAT5O94916 1531 aa-3.29□□□□□ -2.94
PCNX1-208ENST00000554707 TFF3Q07654 80 aa-3.29□□□□□ -2.94
PCNX1-208ENST00000554707 LINC01590Q5TEZ4 76 aa-3.31□□□□□ -2.94
PCNX1-208ENST00000554707 DEFB124Q8NES8 71 aa-3.32□□□□□ -2.94
PCNX1-208ENST00000554707 LINC01556Q5JQF7 62 aa-3.34□□□□□ -2.94
PCNX1-208ENST00000554707 UGGT1Q9NYU2 1555 aa-3.36□□□□□ -2.95
PCNX1-208ENST00000554707 SYCP2Q9BX26 1530 aa-3.36□□□□□ -2.95
PCNX1-208ENST00000554707 CPS1P31327 1500 aa-3.39□□□□□ -2.95
PCNX1-208ENST00000554707 EFCAB5A4FU69 1503 aa-3.4□□□□□ -2.95
PCNX1-208ENST00000554707 PLNP26678 52 aa-3.41□□□□□ -2.96
PCNX1-208ENST00000554707 TOMM7Q9P0U1 55 aa-3.44□□□□□ -2.96
PCNX1-208ENST00000554707 DDX60Q8IY21 1712 aaKnown RBP-3.44□□□□□ -2.96
PCNX1-208ENST00000554707 A0A087WWC5 75 aa-3.47□□□□□ -2.96
PCNX1-208ENST00000554707 AGLP35573 1532 aa-3.51□□□□□ -2.97
PCNX1-208ENST00000554707 ABCA10Q8WWZ4 1543 aa-3.54□□□□□ -2.98
PCNX1-208ENST00000554707 TRPM2O94759 1503 aa-3.59□□□□□ -2.98
PCNX1-208ENST00000554707 SMIM5Q71RC9 77 aa-3.59□□□□□ -2.98
PCNX1-208ENST00000554707 CLTCL1P53675 1640 aa-3.59□□□□□ -2.98
PCNX1-208ENST00000554707 ADCY10Q96PN6 1610 aa-3.59□□□□□ -2.98
PCNX1-208ENST00000554707 NDUFA1O15239 70 aa-3.61□□□□□ -2.99
PCNX1-208ENST00000554707 PRXQ9BXM0 1461 aa-3.62□□□□□ -2.99
PCNX1-208ENST00000554707 ABCA5Q8WWZ7 1642 aa-3.67□□□□□ -3
PCNX1-208ENST00000554707 H3BUX3 64 aa-3.68□□□□□ -3
PCNX1-208ENST00000554707 APELAP0DMC3 54 aa-3.69□□□□□ -3
PCNX1-208ENST00000554707 DUOX1Q9NRD9 1551 aa-3.71□□□□□ -3
PCNX1-208ENST00000554707 TOP2AP11388 1531 aaKnown RBP-3.74□□□□□ -3.01
PCNX1-208ENST00000554707 A0A096LPF7 62 aa-3.75□□□□□ -3.01
PCNX1-208ENST00000554707 HTN3P15516 51 aa-3.77□□□□□ -3.01
PCNX1-208ENST00000554707 IQGAP1P46940 1657 aa-3.79□□□□□ -3.02
PCNX1-208ENST00000554707 CMC2Q9NRP2 79 aa-3.8□□□□□ -3.02
PCNX1-208ENST00000554707 ATP7AQ04656 1500 aa-3.82□□□□□ -3.02
PCNX1-208ENST00000554707 RPL39P62891 51 aaKnown RBP-3.86□□□□□ -3.03
PCNX1-208ENST00000554707 ERICH3Q5RHP9 1530 aa-3.86□□□□□ -3.03
PCNX1-208ENST00000554707 ABCC8Q09428 1581 aa-3.87□□□□□ -3.03
PCNX1-208ENST00000554707 FANCD2Q9BXW9 1451 aa-3.91□□□□□ -3.03
PCNX1-208ENST00000554707 SAMD9LQ8IVG5 1584 aa-3.91□□□□□ -3.04
PCNX1-208ENST00000554707 H3BSH0 61 aa-3.94□□□□□ -3.04
PCNX1-208ENST00000554707 RPL39LQ96EH5 51 aaKnown RBP-3.94□□□□□ -3.04
PCNX1-208ENST00000554707 PRCDQ00LT1 54 aa-4.02□□□□□ -3.05
PCNX1-208ENST00000554707 Q9Y3F1 56 aa-4.03□□□□□ -3.05
PCNX1-208ENST00000554707 MROH2BQ7Z745 1585 aa-4.03□□□□□ -3.05
PCNX1-208ENST00000554707 K7EIM0 57 aa-4.05□□□□□ -3.06
PCNX1-208ENST00000554707 TMEM167AQ8TBQ9 72 aa-4.05□□□□□ -3.06
PCNX1-208ENST00000554707 SMIM31A0A1B0GVY4 71 aa-4.13□□□□□ -3.07
PCNX1-208ENST00000554707 COX14Q96I36 57 aa-4.17□□□□□ -3.08
PCNX1-208ENST00000554707 ARHGAP5-AS1Q96IT6 56 aa-4.18□□□□□ -3.08
PCNX1-208ENST00000554707 SNRPGP15A8MWD9 76 aa-4.23□□□□□ -3.09
PCNX1-208ENST00000554707 IQGAP2Q13576 1575 aa-4.29□□□□□ -3.1
PCNX1-208ENST00000554707 DEFB108BQ8NET1 73 aa-4.34□□□□□ -3.1
PCNX1-208ENST00000554707 STATHP02808 62 aa-4.39□□□□□ -3.11
PCNX1-208ENST00000554707 RPL39P5Q59GN2 51 aa-4.46□□□□□ -3.12
PCNX1-208ENST00000554707 DEFB108AA8MXU0 73 aa-4.47□□□□□ -3.13
PCNX1-208ENST00000554707 SNRPGP62308 76 aaKnown RBP-4.49□□□□□ -3.13
PCNX1-208ENST00000554707 GCC2Q8IWJ2 1684 aa-4.62□□□□□ -3.15
PCNX1-208ENST00000554707 TOMM5Q8N4H5 51 aa-4.67□□□□□ -3.16
Retrieved 78 of 20,778 RNA–protein pairs in 54 ms