RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 SMG1Q96Q15 3661 aaKnown RBP0.11□□□□□ -2.39
SCFD1-211ENST00000554437 DMXL2Q8TDJ6 3036 aa0.11□□□□□ -2.39
SCFD1-211ENST00000554437 CRYBG3Q68DQ2 2970 aa0.1□□□□□ -2.39
SCFD1-211ENST00000554437 LRBAP50851 2863 aa0.1□□□□□ -2.39
SCFD1-211ENST00000554437 CFAP54Q96N23 3096 aa0.1□□□□□ -2.39
SCFD1-211ENST00000554437 FRYQ5TBA9 3013 aa0.09□□□□□ -2.39
SCFD1-211ENST00000554437 VPS13DQ5THJ4 4388 aa0.08□□□□□ -2.4
SCFD1-211ENST00000554437 MGAQ8IWI9 3026 aa0.08□□□□□ -2.4
SCFD1-211ENST00000554437 DEFB1P60022 68 aa0.08□□□□□ -2.4
SCFD1-211ENST00000554437 VPS13AQ96RL7 3174 aa0.08□□□□□ -2.4
SCFD1-211ENST00000554437 CENPEQ02224 2701 aa0.07□□□□□ -2.4
SCFD1-211ENST00000554437 ADGRG4Q8IZF6 3080 aa0.07□□□□□ -2.4
SCFD1-211ENST00000554437 XIRP2A4UGR9 3374 aa0.07□□□□□ -2.4
SCFD1-211ENST00000554437 CDH23Q9H251 3354 aa0.06□□□□□ -2.4
SCFD1-211ENST00000554437 FAT1Q14517 4588 aa0.06□□□□□ -2.4
SCFD1-211ENST00000554437 LINC01590Q5TEZ4 76 aa0.06□□□□□ -2.4
SCFD1-211ENST00000554437 DNAH7Q8WXX0 4024 aa0.05□□□□□ -2.4
SCFD1-211ENST00000554437 CHD7Q9P2D1 2997 aa0.05□□□□□ -2.4
SCFD1-211ENST00000554437 STARD9Q9P2P6 4700 aa0.05□□□□□ -2.4
SCFD1-211ENST00000554437 DNAH1Q9P2D7 4330 aa0.05□□□□□ -2.4
SCFD1-211ENST00000554437 FRYLO94915 3013 aa0.05□□□□□ -2.4
SCFD1-211ENST00000554437 GOLGB1Q14789 3259 aaKnown RBP0.04□□□□□ -2.4
SCFD1-211ENST00000554437 PRUNE2Q8WUY3 3088 aa0.02□□□□□ -2.41
SCFD1-211ENST00000554437 DYNC1H1Q14204 4646 aaKnown RBP0.02□□□□□ -2.41
SCFD1-211ENST00000554437 KRTAP19-6Q3LI70 58 aa0.02□□□□□ -2.41
SCFD1-211ENST00000554437 ARHGAP5-AS1Q96IT6 56 aa0.02□□□□□ -2.41
SCFD1-211ENST00000554437 MT4P47944 62 aa0.01□□□□□ -2.41
SCFD1-211ENST00000554437 KRTAP19-7Q3SYF9 63 aa0.01□□□□□ -2.41
SCFD1-211ENST00000554437 DNAH8Q96JB1 4490 aa0.01□□□□□ -2.41
SCFD1-211ENST00000554437 ATMQ13315 3056 aa0□□□□□ -2.41
SCFD1-211ENST00000554437 DMDP11532 3685 aa0□□□□□ -2.41
SCFD1-211ENST00000554437 TRRAPQ9Y4A5 3859 aa-0.02□□□□□ -2.41
SCFD1-211ENST00000554437 MT1HP80294 61 aa-0.03□□□□□ -2.41
SCFD1-211ENST00000554437 DNAH5Q8TE73 4624 aa-0.04□□□□□ -2.42
SCFD1-211ENST00000554437 KRTAP6-1Q3LI64 71 aa-0.04□□□□□ -2.42
SCFD1-211ENST00000554437 CMYA5Q8N3K9 4069 aa-0.04□□□□□ -2.42
SCFD1-211ENST00000554437 DEFB104AQ8WTQ1 72 aa-0.05□□□□□ -2.42
SCFD1-211ENST00000554437 KRTAP19-8Q3LI54 63 aa-0.07□□□□□ -2.42
SCFD1-211ENST00000554437 KRTAP20-2Q3LI61 65 aa-0.08□□□□□ -2.42
SCFD1-211ENST00000554437 PLECQ15149 4684 aaKnown RBP-0.08□□□□□ -2.42
SCFD1-211ENST00000554437 MUC17Q685J3 4493 aa-0.08□□□□□ -2.42
SCFD1-211ENST00000554437 DNAH10Q8IVF4 4471 aa-0.08□□□□□ -2.42
SCFD1-211ENST00000554437 PRCDQ00LT1 54 aa-0.12□□□□□ -2.43
SCFD1-211ENST00000554437 DEFB136Q30KP8 78 aa-0.12□□□□□ -2.43
SCFD1-211ENST00000554437 DNAH17Q9UFH2 4485 aa-0.13□□□□□ -2.43
SCFD1-211ENST00000554437 MT1EP04732 61 aa-0.13□□□□□ -2.43
SCFD1-211ENST00000554437 RHPN1-AS1Q9BWJ2 59 aa-0.13□□□□□ -2.43
SCFD1-211ENST00000554437 K7EIM0 57 aa-0.17□□□□□ -2.44
SCFD1-211ENST00000554437 TTTY10Q9BZA0 68 aa-0.17□□□□□ -2.44
SCFD1-211ENST00000554437 MT1LQ93083 61 aa-0.19□□□□□ -2.44
SCFD1-211ENST00000554437 MT1XP80297 61 aa-0.22□□□□□ -2.44
SCFD1-211ENST00000554437 A0A096LNI7 61 aa-0.23□□□□□ -2.45
SCFD1-211ENST00000554437 H3BSH0 61 aa-0.25□□□□□ -2.45
SCFD1-211ENST00000554437 MT1BP07438 61 aa-0.26□□□□□ -2.45
SCFD1-211ENST00000554437 DEFB4AO15263 64 aa-0.29□□□□□ -2.46
SCFD1-211ENST00000554437 H3BUX3 64 aa-0.3□□□□□ -2.46
SCFD1-211ENST00000554437 MT1GP13640 62 aa-0.31□□□□□ -2.46
SCFD1-211ENST00000554437 MT1HL1P0DM35 61 aa-0.32□□□□□ -2.46
SCFD1-211ENST00000554437 TMEM167AQ8TBQ9 72 aa-0.32□□□□□ -2.46
SCFD1-211ENST00000554437 MT1FP04733 61 aa-0.33□□□□□ -2.46
SCFD1-211ENST00000554437 HTN1P15515 57 aa-0.33□□□□□ -2.46
SCFD1-211ENST00000554437 DEFB124Q8NES8 71 aa-0.33□□□□□ -2.46
SCFD1-211ENST00000554437 MT2AP02795 61 aa-0.34□□□□□ -2.46
SCFD1-211ENST00000554437 KRTAP19-2Q3LHN2 52 aa-0.34□□□□□ -2.46
SCFD1-211ENST00000554437 MT1MQ8N339 61 aa-0.34□□□□□ -2.46
SCFD1-211ENST00000554437 DEFB133Q30KQ1 61 aa-0.35□□□□□ -2.47
SCFD1-211ENST00000554437 RPL39P5Q59GN2 51 aa-0.45□□□□□ -2.48
SCFD1-211ENST00000554437 RPS29P62273 56 aaKnown RBP-0.46□□□□□ -2.48
SCFD1-211ENST00000554437 CD52P31358 61 aa-0.5□□□□□ -2.49
SCFD1-211ENST00000554437 DEFB108AA8MXU0 73 aa-0.51□□□□□ -2.49
SCFD1-211ENST00000554437 APELAP0DMC3 54 aa-0.62□□□□□ -2.51
SCFD1-211ENST00000554437 STATHP02808 62 aa-0.65□□□□□ -2.51
SCFD1-211ENST00000554437 LINC01556Q5JQF7 62 aa-0.68□□□□□ -2.52
SCFD1-211ENST00000554437 A0A096LPF7 62 aa-0.69□□□□□ -2.52
SCFD1-211ENST00000554437 HTN3P15516 51 aa-0.78□□□□□ -2.53
SCFD1-211ENST00000554437 DEFB108BQ8NET1 73 aa-0.8□□□□□ -2.54
SCFD1-211ENST00000554437 COX14Q96I36 57 aa-0.88□□□□□ -2.55
SCFD1-211ENST00000554437 Q9Y3F1 56 aa-0.88□□□□□ -2.55
Retrieved 78 of 20,778 RNA–protein pairs in 139 ms