RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 SPINT4Q6UDR6 99 aa1.21□□□□□ -2.22
PRPF39-205ENST00000554081 PLAC4Q8WY50 150 aa1.2□□□□□ -2.22
PRPF39-205ENST00000554081 KRTAP4-3Q9BYR4 195 aa1.2□□□□□ -2.22
PRPF39-205ENST00000554081 MT2AP02795 61 aa1.19□□□□□ -2.22
PRPF39-205ENST00000554081 MT1FP04733 61 aa1.19□□□□□ -2.22
PRPF39-205ENST00000554081 COA5Q86WW8 74 aa1.19□□□□□ -2.22
PRPF39-205ENST00000554081 KRTAP5-5Q701N2 237 aaPredicted RBP1.18□□□□□ -2.22
PRPF39-205ENST00000554081 NEBP20929 6669 aa1.17□□□□□ -2.22
PRPF39-205ENST00000554081 ACYP2P14621 99 aa1.16□□□□□ -2.22
PRPF39-205ENST00000554081 KRTAP19-2Q3LHN2 52 aa1.15□□□□□ -2.22
PRPF39-205ENST00000554081 CRIPTQ9P021 101 aa1.15□□□□□ -2.22
PRPF39-205ENST00000554081 FCGBPQ9Y6R7 5405 aaPredicted RBP1.15□□□□□ -2.23
PRPF39-205ENST00000554081 A0A1B0GU69 56 aa1.14□□□□□ -2.23
PRPF39-205ENST00000554081 INE1O15225 51 aa1.13□□□□□ -2.23
PRPF39-205ENST00000554081 LCE1AQ5T7P2 110 aa1.13□□□□□ -2.23
PRPF39-205ENST00000554081 SPRR2FQ96RM1 72 aa1.12□□□□□ -2.23
PRPF39-205ENST00000554081 SYNE1Q8NF91 8797 aaKnown RBP1.11□□□□□ -2.23
PRPF39-205ENST00000554081 FLGP20930 4061 aaPredicted RBP1.11□□□□□ -2.23
PRPF39-205ENST00000554081 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
PRPF39-205ENST00000554081 KRTAP8-1Q8IUC2 63 aa1.09□□□□□ -2.23
PRPF39-205ENST00000554081 H0YAA0 97 aa1.08□□□□□ -2.24
PRPF39-205ENST00000554081 KRTAP2-2Q9BYT5 123 aa1.08□□□□□ -2.24
PRPF39-205ENST00000554081 MDN1Q9NU22 5596 aa1.07□□□□□ -2.24
PRPF39-205ENST00000554081 SPRR2EP22531 72 aa1.07□□□□□ -2.24
PRPF39-205ENST00000554081 SPRR2BP35325 72 aa1.07□□□□□ -2.24
PRPF39-205ENST00000554081 SPRR2AP35326 72 aa1.07□□□□□ -2.24
PRPF39-205ENST00000554081 KRTAP12-2P59991 146 aa1.06□□□□□ -2.24
PRPF39-205ENST00000554081 MT1BP07438 61 aa1.05□□□□□ -2.24
PRPF39-205ENST00000554081 KRTAP9-6A8MVA2 160 aa1.03□□□□□ -2.24
PRPF39-205ENST00000554081 KRTAP19-6Q3LI70 58 aa1.03□□□□□ -2.24
PRPF39-205ENST00000554081 KRTAP13-4Q3LI77 160 aa1.03□□□□□ -2.24
PRPF39-205ENST00000554081 SPRR2GQ9BYE4 73 aa1.02□□□□□ -2.25
PRPF39-205ENST00000554081 C10orf95Q9H7T3 257 aa1.02□□□□□ -2.25
PRPF39-205ENST00000554081 SPRR2DP22532 72 aa1.02□□□□□ -2.25
PRPF39-205ENST00000554081 PP632Q6XCG6 107 aa1.02□□□□□ -2.25
PRPF39-205ENST00000554081 TNP1P09430 55 aa1.02□□□□□ -2.25
PRPF39-205ENST00000554081 KRTAP20-1Q3LI63 56 aa1.02□□□□□ -2.25
PRPF39-205ENST00000554081 KRTAP10-5P60370 271 aa1.01□□□□□ -2.25
PRPF39-205ENST00000554081 KRTAP10-12P60413 245 aa1□□□□□ -2.25
PRPF39-205ENST00000554081 MT1XP80297 61 aa0.99□□□□□ -2.25
PRPF39-205ENST00000554081 KRTAP6-3Q3LI67 103 aa0.99□□□□□ -2.25
PRPF39-205ENST00000554081 KRTAP19-8Q3LI54 63 aa0.98□□□□□ -2.25
PRPF39-205ENST00000554081 SPRR5A0A1B0GTR4 108 aa0.98□□□□□ -2.25
PRPF39-205ENST00000554081 MT4P47944 62 aa0.98□□□□□ -2.25
PRPF39-205ENST00000554081 KRTAP5-7Q6L8G8 165 aa0.97□□□□□ -2.25
PRPF39-205ENST00000554081 KRTAP12-1P59990 96 aa0.97□□□□□ -2.25
PRPF39-205ENST00000554081 MUC5ACP98088 5654 aa0.97□□□□□ -2.25
PRPF39-205ENST00000554081 LCE3AQ5TA76 89 aa0.95□□□□□ -2.26
PRPF39-205ENST00000554081 KRTAP19-5Q3LI72 72 aa0.95□□□□□ -2.26
PRPF39-205ENST00000554081 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
PRPF39-205ENST00000554081 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
PRPF39-205ENST00000554081 MT3P25713 68 aa0.93□□□□□ -2.26
PRPF39-205ENST00000554081 KRTAP2-1Q9BYU5 128 aa0.93□□□□□ -2.26
PRPF39-205ENST00000554081 KRTAP12-3P60328 96 aa0.92□□□□□ -2.26
PRPF39-205ENST00000554081 MT1GP13640 62 aa0.9□□□□□ -2.27
PRPF39-205ENST00000554081 KRTAP19-3Q7Z4W3 81 aa0.89□□□□□ -2.27
PRPF39-205ENST00000554081 LCE1FQ5T754 118 aa0.89□□□□□ -2.27
PRPF39-205ENST00000554081 MT1EP04732 61 aa0.88□□□□□ -2.27
PRPF39-205ENST00000554081 KRTAP19-7Q3SYF9 63 aa0.87□□□□□ -2.27
PRPF39-205ENST00000554081 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
PRPF39-205ENST00000554081 MT1MQ8N339 61 aa0.85□□□□□ -2.27
PRPF39-205ENST00000554081 KRTAP12-4P60329 112 aa0.85□□□□□ -2.27
PRPF39-205ENST00000554081 MT1LQ93083 61 aa0.85□□□□□ -2.27
PRPF39-205ENST00000554081 MUC19Q7Z5P9 8384 aa0.83□□□□□ -2.28
PRPF39-205ENST00000554081 LCE1CQ5T751 118 aa0.83□□□□□ -2.28
PRPF39-205ENST00000554081 LCE1BQ5T7P3 118 aa0.83□□□□□ -2.28
PRPF39-205ENST00000554081 LCE3CQ5T5A8 94 aa0.82□□□□□ -2.28
PRPF39-205ENST00000554081 LCE3EQ5T5B0 92 aa0.77□□□□□ -2.29
PRPF39-205ENST00000554081 KRTAP6-1Q3LI64 71 aa0.76□□□□□ -2.29
PRPF39-205ENST00000554081 KRTAP6-2Q3LI66 62 aa0.75□□□□□ -2.29
PRPF39-205ENST00000554081 KRTAP20-2Q3LI61 65 aa0.74□□□□□ -2.29
PRPF39-205ENST00000554081 LCE3DQ9BYE3 92 aa0.72□□□□□ -2.29
PRPF39-205ENST00000554081 MT1AP04731 61 aa0.7□□□□□ -2.3
PRPF39-205ENST00000554081 KRTAP21-2Q3LI59 83 aa0.59□□□□□ -2.32
PRPF39-205ENST00000554081 PRM1P04553 51 aa0.58□□□□□ -2.32
PRPF39-205ENST00000554081 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
PRPF39-205ENST00000554081 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
PRPF39-205ENST00000554081 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms