RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 A0A1B0GVX0 72 aa2.81□□□□□ -1.96
SMARCE1P3-201ENST00000553649 DSCR10P59022 87 aa2.81□□□□□ -1.96
SMARCE1P3-201ENST00000553649 Q96NJ1 140 aa2.81□□□□□ -1.96
SMARCE1P3-201ENST00000553649 A8MUU9 505 aa2.8□□□□□ -1.96
SMARCE1P3-201ENST00000553649 HRES1P13985 223 aa2.8□□□□□ -1.96
SMARCE1P3-201ENST00000553649 KRTAP10-10P60014 251 aa2.8□□□□□ -1.96
SMARCE1P3-201ENST00000553649 ACYP2P14621 99 aa2.79□□□□□ -1.96
SMARCE1P3-201ENST00000553649 K7EQZ3 153 aa2.78□□□□□ -1.96
SMARCE1P3-201ENST00000553649 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
SMARCE1P3-201ENST00000553649 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
SMARCE1P3-201ENST00000553649 SPINT4Q6UDR6 99 aa2.77□□□□□ -1.97
SMARCE1P3-201ENST00000553649 IGFL1Q6UW32 110 aa2.77□□□□□ -1.97
SMARCE1P3-201ENST00000553649 LINC00472Q9H8W2 130 aa2.77□□□□□ -1.97
SMARCE1P3-201ENST00000553649 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
SMARCE1P3-201ENST00000553649 WFDC13Q8IUB5 93 aa2.72□□□□□ -1.97
SMARCE1P3-201ENST00000553649 A0A1B0GU33 70 aa2.69□□□□□ -1.98
SMARCE1P3-201ENST00000553649 DEFB116Q30KQ4 102 aa2.69□□□□□ -1.98
SMARCE1P3-201ENST00000553649 SPRR2EP22531 72 aa2.67□□□□□ -1.98
SMARCE1P3-201ENST00000553649 SPRR2BP35325 72 aa2.67□□□□□ -1.98
SMARCE1P3-201ENST00000553649 SPRR2AP35326 72 aa2.67□□□□□ -1.98
SMARCE1P3-201ENST00000553649 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
SMARCE1P3-201ENST00000553649 KRTAP12-2P59991 146 aa2.66□□□□□ -1.98
SMARCE1P3-201ENST00000553649 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.99
SMARCE1P3-201ENST00000553649 MMP24-AS1A0A0U1RRL7 71 aa2.63□□□□□ -1.99
SMARCE1P3-201ENST00000553649 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
SMARCE1P3-201ENST00000553649 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
SMARCE1P3-201ENST00000553649 MRPL34Q9BQ48 92 aaKnown RBP2.6□□□□□ -1.99
SMARCE1P3-201ENST00000553649 PRO2289Q9P1D8 64 aa2.59□□□□□ -1.99
SMARCE1P3-201ENST00000553649 SPRR2DP22532 72 aa2.58□□□□□ -2
SMARCE1P3-201ENST00000553649 SPRR2FQ96RM1 72 aa2.57□□□□□ -2
SMARCE1P3-201ENST00000553649 CRIPTQ9P021 101 aa2.57□□□□□ -2
SMARCE1P3-201ENST00000553649 H1FX-AS1Q4G0G2 97 aa2.54□□□□□ -2
SMARCE1P3-201ENST00000553649 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
SMARCE1P3-201ENST00000553649 H0YAA0 97 aa2.53□□□□□ -2
SMARCE1P3-201ENST00000553649 PLAC4Q8WY50 150 aa2.52□□□□□ -2.01
SMARCE1P3-201ENST00000553649 MT1BP07438 61 aa2.51□□□□□ -2.01
SMARCE1P3-201ENST00000553649 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
SMARCE1P3-201ENST00000553649 INE1O15225 51 aa2.48□□□□□ -2.01
SMARCE1P3-201ENST00000553649 R4GN34 69 aa2.48□□□□□ -2.01
SMARCE1P3-201ENST00000553649 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
SMARCE1P3-201ENST00000553649 SPRR5A0A1B0GTR4 108 aa2.45□□□□□ -2.02
SMARCE1P3-201ENST00000553649 KRTAP19-8Q3LI54 63 aa2.45□□□□□ -2.02
SMARCE1P3-201ENST00000553649 SPRR2GQ9BYE4 73 aa2.44□□□□□ -2.02
SMARCE1P3-201ENST00000553649 S4R3F8 94 aa2.42□□□□□ -2.02
SMARCE1P3-201ENST00000553649 KRTAP8-1Q8IUC2 63 aa2.38□□□□□ -2.03
SMARCE1P3-201ENST00000553649 C10orf95Q9H7T3 257 aa2.36□□□□□ -2.03
SMARCE1P3-201ENST00000553649 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
SMARCE1P3-201ENST00000553649 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
SMARCE1P3-201ENST00000553649 MT4P47944 62 aa2.31□□□□□ -2.04
SMARCE1P3-201ENST00000553649 MT1XP80297 61 aa2.31□□□□□ -2.04
SMARCE1P3-201ENST00000553649 PP632Q6XCG6 107 aa2.3□□□□□ -2.04
SMARCE1P3-201ENST00000553649 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
SMARCE1P3-201ENST00000553649 M0QZ58 72 aa2.2□□□□□ -2.06
SMARCE1P3-201ENST00000553649 A0A0D9SG42 100 aa2.19□□□□□ -2.06
SMARCE1P3-201ENST00000553649 KRTAP12-1P59990 96 aa2.17□□□□□ -2.06
SMARCE1P3-201ENST00000553649 KRTAP13-4Q3LI77 160 aa2.15□□□□□ -2.07
SMARCE1P3-201ENST00000553649 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
SMARCE1P3-201ENST00000553649 KRTAP19-3Q7Z4W3 81 aa2.08□□□□□ -2.08
SMARCE1P3-201ENST00000553649 MT1EP04732 61 aa2.06□□□□□ -2.08
SMARCE1P3-201ENST00000553649 KRTAP19-7Q3SYF9 63 aa2.06□□□□□ -2.08
SMARCE1P3-201ENST00000553649 KRTAP20-2Q3LI61 65 aa2.05□□□□□ -2.08
SMARCE1P3-201ENST00000553649 SYNE1Q8NF91 8797 aaKnown RBP1.99□□□□□ -2.09
SMARCE1P3-201ENST00000553649 MT1GP13640 62 aa1.99□□□□□ -2.09
SMARCE1P3-201ENST00000553649 KRTAP19-5Q3LI72 72 aa1.99□□□□□ -2.09
SMARCE1P3-201ENST00000553649 MT1MQ8N339 61 aa1.98□□□□□ -2.09
SMARCE1P3-201ENST00000553649 TNP1P09430 55 aa1.94□□□□□ -2.1
SMARCE1P3-201ENST00000553649 MT1LQ93083 61 aa1.94□□□□□ -2.1
SMARCE1P3-201ENST00000553649 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
SMARCE1P3-201ENST00000553649 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
SMARCE1P3-201ENST00000553649 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
SMARCE1P3-201ENST00000553649 KRTAP6-1Q3LI64 71 aa1.66□□□□□ -2.14
SMARCE1P3-201ENST00000553649 MT1AP04731 61 aa1.64□□□□□ -2.15
SMARCE1P3-201ENST00000553649 KRTAP6-2Q3LI66 62 aa1.63□□□□□ -2.15
SMARCE1P3-201ENST00000553649 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
SMARCE1P3-201ENST00000553649 PRM1P04553 51 aa1.37□□□□□ -2.19
SMARCE1P3-201ENST00000553649 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
SMARCE1P3-201ENST00000553649 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 100.9 ms