RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 MMP24-AS1A0A0U1RRL7 71 aa2.45□□□□□ -2.02
ATXN3-218ENST00000553309 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
ATXN3-218ENST00000553309 DEFB105AQ8NG35 78 aa2.43□□□□□ -2.02
ATXN3-218ENST00000553309 PRO2289Q9P1D8 64 aa2.43□□□□□ -2.02
ATXN3-218ENST00000553309 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
ATXN3-218ENST00000553309 SPRR1AP35321 89 aa2.42□□□□□ -2.02
ATXN3-218ENST00000553309 FLGP20930 4061 aaPredicted RBP2.42□□□□□ -2.02
ATXN3-218ENST00000553309 Q6ZRX8 168 aa2.4□□□□□ -2.03
ATXN3-218ENST00000553309 MRPL34Q9BQ48 92 aaKnown RBP2.4□□□□□ -2.03
ATXN3-218ENST00000553309 KMT2DO14686 5537 aa2.4□□□□□ -2.03
ATXN3-218ENST00000553309 COX6B2Q6YFQ2 88 aa2.39□□□□□ -2.03
ATXN3-218ENST00000553309 H0YAA0 97 aa2.38□□□□□ -2.03
ATXN3-218ENST00000553309 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
ATXN3-218ENST00000553309 CRIPTQ9P021 101 aa2.38□□□□□ -2.03
ATXN3-218ENST00000553309 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
ATXN3-218ENST00000553309 SPRR1BP22528 89 aa2.36□□□□□ -2.03
ATXN3-218ENST00000553309 KRTAP13-2Q52LG2 175 aa2.36□□□□□ -2.03
ATXN3-218ENST00000553309 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
ATXN3-218ENST00000553309 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
ATXN3-218ENST00000553309 KRTAP19-6Q3LI70 58 aa2.35□□□□□ -2.03
ATXN3-218ENST00000553309 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
ATXN3-218ENST00000553309 H1FX-AS1Q4G0G2 97 aa2.34□□□□□ -2.03
ATXN3-218ENST00000553309 R4GN34 69 aa2.34□□□□□ -2.03
ATXN3-218ENST00000553309 INE1O15225 51 aa2.31□□□□□ -2.04
ATXN3-218ENST00000553309 MT2AP02795 61 aa2.31□□□□□ -2.04
ATXN3-218ENST00000553309 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
ATXN3-218ENST00000553309 MT1FP04733 61 aa2.3□□□□□ -2.04
ATXN3-218ENST00000553309 RPL37P61927 97 aaKnown RBP2.29□□□□□ -2.04
ATXN3-218ENST00000553309 KRTAP13-1Q8IUC0 172 aa2.28□□□□□ -2.04
ATXN3-218ENST00000553309 PRLHP81277 87 aa2.27□□□□□ -2.05
ATXN3-218ENST00000553309 KRTAP2-1Q9BYU5 128 aa2.25□□□□□ -2.05
ATXN3-218ENST00000553309 C10orf95Q9H7T3 257 aa2.25□□□□□ -2.05
ATXN3-218ENST00000553309 C9orf92A6NGG3 77 aa2.22□□□□□ -2.05
ATXN3-218ENST00000553309 SPINK1P00995 79 aa2.19□□□□□ -2.06
ATXN3-218ENST00000553309 SPRR2EP22531 72 aa2.18□□□□□ -2.06
ATXN3-218ENST00000553309 SPRR2BP35325 72 aa2.18□□□□□ -2.06
ATXN3-218ENST00000553309 SPRR2AP35326 72 aa2.18□□□□□ -2.06
ATXN3-218ENST00000553309 RPS29P62273 56 aaKnown RBP2.15□□□□□ -2.07
ATXN3-218ENST00000553309 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
ATXN3-218ENST00000553309 S4R3F8 94 aa2.14□□□□□ -2.07
ATXN3-218ENST00000553309 KRTAP12-3P60328 96 aa2.13□□□□□ -2.07
ATXN3-218ENST00000553309 SPRR2DP22532 72 aa2.11□□□□□ -2.07
ATXN3-218ENST00000553309 SPRR2FQ96RM1 72 aa2.11□□□□□ -2.07
ATXN3-218ENST00000553309 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
ATXN3-218ENST00000553309 DSTQ03001 7570 aaKnown RBP2.1□□□□□ -2.07
ATXN3-218ENST00000553309 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
ATXN3-218ENST00000553309 A0A0D9SG42 100 aa2.06□□□□□ -2.08
ATXN3-218ENST00000553309 KRTAP12-1P59990 96 aa2.03□□□□□ -2.08
ATXN3-218ENST00000553309 KRTAP13-4Q3LI77 160 aa2.03□□□□□ -2.08
ATXN3-218ENST00000553309 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.09
ATXN3-218ENST00000553309 KRTAP5-10Q6L8G5 202 aa2.02□□□□□ -2.09
ATXN3-218ENST00000553309 M0QZ58 72 aa1.99□□□□□ -2.09
ATXN3-218ENST00000553309 MT1BP07438 61 aa1.98□□□□□ -2.09
ATXN3-218ENST00000553309 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
ATXN3-218ENST00000553309 MT4P47944 62 aa1.91□□□□□ -2.1
ATXN3-218ENST00000553309 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
ATXN3-218ENST00000553309 KRTAP19-8Q3LI54 63 aa1.86□□□□□ -2.11
ATXN3-218ENST00000553309 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
ATXN3-218ENST00000553309 SPRR2GQ9BYE4 73 aa1.79□□□□□ -2.12
ATXN3-218ENST00000553309 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
ATXN3-218ENST00000553309 TNP1P09430 55 aa1.77□□□□□ -2.13
ATXN3-218ENST00000553309 MT1XP80297 61 aa1.75□□□□□ -2.13
ATXN3-218ENST00000553309 KRTAP20-2Q3LI61 65 aa1.64□□□□□ -2.15
ATXN3-218ENST00000553309 KRTAP19-3Q7Z4W3 81 aa1.63□□□□□ -2.15
ATXN3-218ENST00000553309 MT1EP04732 61 aa1.57□□□□□ -2.16
ATXN3-218ENST00000553309 KRTAP19-7Q3SYF9 63 aa1.56□□□□□ -2.16
ATXN3-218ENST00000553309 MT1MQ8N339 61 aa1.53□□□□□ -2.16
ATXN3-218ENST00000553309 SYNE1Q8NF91 8797 aaKnown RBP1.52□□□□□ -2.17
ATXN3-218ENST00000553309 MT1GP13640 62 aa1.51□□□□□ -2.17
ATXN3-218ENST00000553309 KRTAP19-5Q3LI72 72 aa1.43□□□□□ -2.18
ATXN3-218ENST00000553309 MT1LQ93083 61 aa1.43□□□□□ -2.18
ATXN3-218ENST00000553309 PRM1P04553 51 aa1.3□□□□□ -2.2
ATXN3-218ENST00000553309 KRTAP6-2Q3LI66 62 aa1.28□□□□□ -2.2
ATXN3-218ENST00000553309 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
ATXN3-218ENST00000553309 MT1AP04731 61 aa1.24□□□□□ -2.21
ATXN3-218ENST00000553309 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
ATXN3-218ENST00000553309 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
ATXN3-218ENST00000553309 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 71.8 ms