RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 KRTAP13-2Q52LG2 175 aa2.36□□□□□ -2.03
PFDN5-219ENST00000553171 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
PFDN5-219ENST00000553171 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
PFDN5-219ENST00000553171 S4R3F8 94 aa2.35□□□□□ -2.03
PFDN5-219ENST00000553171 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
PFDN5-219ENST00000553171 KRTAP19-2Q3LHN2 52 aa2.32□□□□□ -2.04
PFDN5-219ENST00000553171 KRTAP4-1Q9BYQ7 146 aa2.32□□□□□ -2.04
PFDN5-219ENST00000553171 KRTAP19-6Q3LI70 58 aa2.31□□□□□ -2.04
PFDN5-219ENST00000553171 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
PFDN5-219ENST00000553171 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
PFDN5-219ENST00000553171 M0QZ58 72 aa2.28□□□□□ -2.04
PFDN5-219ENST00000553171 M0R2T5 61 aa2.25□□□□□ -2.05
PFDN5-219ENST00000553171 A0A0D9SG42 100 aa2.24□□□□□ -2.05
PFDN5-219ENST00000553171 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
PFDN5-219ENST00000553171 KRTAP12-1P59990 96 aa2.21□□□□□ -2.06
PFDN5-219ENST00000553171 LCE1EQ5T753 118 aa2.21□□□□□ -2.06
PFDN5-219ENST00000553171 C9orf92A6NGG3 77 aa2.2□□□□□ -2.06
PFDN5-219ENST00000553171 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
PFDN5-219ENST00000553171 KRTAP13-4Q3LI77 160 aa2.19□□□□□ -2.06
PFDN5-219ENST00000553171 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
PFDN5-219ENST00000553171 LCE1AQ5T7P2 110 aa2.18□□□□□ -2.06
PFDN5-219ENST00000553171 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
PFDN5-219ENST00000553171 DSTQ03001 7570 aaKnown RBP2.13□□□□□ -2.07
PFDN5-219ENST00000553171 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
PFDN5-219ENST00000553171 SPRR2EP22531 72 aa2.1□□□□□ -2.07
PFDN5-219ENST00000553171 SPRR2BP35325 72 aa2.1□□□□□ -2.07
PFDN5-219ENST00000553171 SPRR2AP35326 72 aa2.1□□□□□ -2.07
PFDN5-219ENST00000553171 MT2AP02795 61 aa2.07□□□□□ -2.08
PFDN5-219ENST00000553171 MT1FP04733 61 aa2.05□□□□□ -2.08
PFDN5-219ENST00000553171 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
PFDN5-219ENST00000553171 SPRR2DP22532 72 aa2.04□□□□□ -2.08
PFDN5-219ENST00000553171 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
PFDN5-219ENST00000553171 KRTAP10-10P60014 251 aa2.02□□□□□ -2.09
PFDN5-219ENST00000553171 TNP1P09430 55 aa2.01□□□□□ -2.09
PFDN5-219ENST00000553171 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
PFDN5-219ENST00000553171 MT3P25713 68 aa1.97□□□□□ -2.09
PFDN5-219ENST00000553171 SPRR2FQ96RM1 72 aa1.97□□□□□ -2.09
PFDN5-219ENST00000553171 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
PFDN5-219ENST00000553171 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
PFDN5-219ENST00000553171 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
PFDN5-219ENST00000553171 KRTAP9-6A8MVA2 160 aa1.9□□□□□ -2.11
PFDN5-219ENST00000553171 KRTAP10-5P60370 271 aa1.86□□□□□ -2.11
PFDN5-219ENST00000553171 LCE1FQ5T754 118 aa1.85□□□□□ -2.11
PFDN5-219ENST00000553171 MT4P47944 62 aa1.83□□□□□ -2.12
PFDN5-219ENST00000553171 KRTAP12-4P60329 112 aa1.82□□□□□ -2.12
PFDN5-219ENST00000553171 SPRR2GQ9BYE4 73 aa1.82□□□□□ -2.12
PFDN5-219ENST00000553171 KRTAP8-1Q8IUC2 63 aa1.8□□□□□ -2.12
PFDN5-219ENST00000553171 KRTAP10-12P60413 245 aa1.74□□□□□ -2.13
PFDN5-219ENST00000553171 MT1BP07438 61 aa1.72□□□□□ -2.13
PFDN5-219ENST00000553171 KRTAP19-8Q3LI54 63 aa1.72□□□□□ -2.13
PFDN5-219ENST00000553171 LCE3AQ5TA76 89 aa1.72□□□□□ -2.13
PFDN5-219ENST00000553171 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
PFDN5-219ENST00000553171 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
PFDN5-219ENST00000553171 LCE3CQ5T5A8 94 aa1.69□□□□□ -2.14
PFDN5-219ENST00000553171 MT1XP80297 61 aa1.63□□□□□ -2.15
PFDN5-219ENST00000553171 KRTAP20-2Q3LI61 65 aa1.59□□□□□ -2.15
PFDN5-219ENST00000553171 LCE3EQ5T5B0 92 aa1.55□□□□□ -2.16
PFDN5-219ENST00000553171 KRTAP19-5Q3LI72 72 aa1.53□□□□□ -2.16
PFDN5-219ENST00000553171 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
PFDN5-219ENST00000553171 KRTAP5-5Q701N2 237 aaPredicted RBP1.49□□□□□ -2.17
PFDN5-219ENST00000553171 MT1EP04732 61 aa1.48□□□□□ -2.17
PFDN5-219ENST00000553171 LCE3DQ9BYE3 92 aa1.48□□□□□ -2.17
PFDN5-219ENST00000553171 KRTAP19-7Q3SYF9 63 aa1.47□□□□□ -2.17
PFDN5-219ENST00000553171 MT1LQ93083 61 aa1.46□□□□□ -2.18
PFDN5-219ENST00000553171 PRM1P04553 51 aa1.45□□□□□ -2.18
PFDN5-219ENST00000553171 KRTAP19-3Q7Z4W3 81 aa1.45□□□□□ -2.18
PFDN5-219ENST00000553171 LCE1CQ5T751 118 aa1.4□□□□□ -2.19
PFDN5-219ENST00000553171 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.19
PFDN5-219ENST00000553171 MT1AP04731 61 aa1.39□□□□□ -2.19
PFDN5-219ENST00000553171 MT1GP13640 62 aa1.38□□□□□ -2.19
PFDN5-219ENST00000553171 MT1MQ8N339 61 aa1.32□□□□□ -2.2
PFDN5-219ENST00000553171 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
PFDN5-219ENST00000553171 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
PFDN5-219ENST00000553171 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
PFDN5-219ENST00000553171 KRTAP6-1Q3LI64 71 aa1.18□□□□□ -2.22
PFDN5-219ENST00000553171 KRTAP21-2Q3LI59 83 aa1.07□□□□□ -2.24
PFDN5-219ENST00000553171 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
PFDN5-219ENST00000553171 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 247.2 ms