RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 LEAP2Q969E1 77 aa-1.19□□□□□ -2.6
NPAS3-208ENST00000550662 NMES1Q9C002 83 aa-1.19□□□□□ -2.6
NPAS3-208ENST00000550662 LMO7Q8WWI1 1683 aa-1.2□□□□□ -2.6
NPAS3-208ENST00000550662 EFCAB6Q5THR3 1501 aa-1.2□□□□□ -2.6
NPAS3-208ENST00000550662 WFDC10BQ8IUB3 73 aa-1.2□□□□□ -2.6
NPAS3-208ENST00000550662 SMCO4Q9NRQ5 59 aa-1.2□□□□□ -2.6
NPAS3-208ENST00000550662 PDCD5O14737 125 aa-1.21□□□□□ -2.6
NPAS3-208ENST00000550662 EFCAB5A4FU69 1503 aa-1.21□□□□□ -2.6
NPAS3-208ENST00000550662 CCDC180Q9P1Z9 1646 aa-1.22□□□□□ -2.6
NPAS3-208ENST00000550662 DEFB104AQ8WTQ1 72 aa-1.22□□□□□ -2.6
NPAS3-208ENST00000550662 SCRIBQ14160 1630 aa-1.23□□□□□ -2.61
NPAS3-208ENST00000550662 DEFB131AP59861 70 aa-1.24□□□□□ -2.61
NPAS3-208ENST00000550662 UGGT1Q9NYU2 1555 aa-1.25□□□□□ -2.61
NPAS3-208ENST00000550662 POLR2KP53803 58 aaKnown RBP-1.25□□□□□ -2.61
NPAS3-208ENST00000550662 S100ZQ8WXG8 99 aa-1.25□□□□□ -2.61
NPAS3-208ENST00000550662 H0YGX0 51 aa-1.26□□□□□ -2.61
NPAS3-208ENST00000550662 TTTY10Q9BZA0 68 aa-1.26□□□□□ -2.61
NPAS3-208ENST00000550662 SYCP2Q9BX26 1530 aa-1.26□□□□□ -2.61
NPAS3-208ENST00000550662 MROH2AA6NES4 1674 aa-1.28□□□□□ -2.61
NPAS3-208ENST00000550662 AGLP35573 1532 aa-1.28□□□□□ -2.61
NPAS3-208ENST00000550662 ABCA10Q8WWZ4 1543 aa-1.28□□□□□ -2.61
NPAS3-208ENST00000550662 CPS1P31327 1500 aa-1.31□□□□□ -2.62
NPAS3-208ENST00000550662 NRXN3Q9Y4C0 1643 aa-1.32□□□□□ -2.62
NPAS3-208ENST00000550662 A0A087WWC5 75 aa-1.32□□□□□ -2.62
NPAS3-208ENST00000550662 IQGAP1P46940 1657 aa-1.32□□□□□ -2.62
NPAS3-208ENST00000550662 ABCA5Q8WWZ7 1642 aa-1.33□□□□□ -2.62
NPAS3-208ENST00000550662 TFF3Q07654 80 aa-1.33□□□□□ -2.62
NPAS3-208ENST00000550662 PLNP26678 52 aa-1.34□□□□□ -2.62
NPAS3-208ENST00000550662 DDX60Q8IY21 1712 aaKnown RBP-1.35□□□□□ -2.62
NPAS3-208ENST00000550662 PRXQ9BXM0 1461 aa-1.37□□□□□ -2.63
NPAS3-208ENST00000550662 NFAT5O94916 1531 aa-1.37□□□□□ -2.63
NPAS3-208ENST00000550662 SMIM2Q9BVW6 85 aa-1.38□□□□□ -2.63
NPAS3-208ENST00000550662 TRPM2O94759 1503 aa-1.39□□□□□ -2.63
NPAS3-208ENST00000550662 CLTCL1P53675 1640 aa-1.39□□□□□ -2.63
NPAS3-208ENST00000550662 SMIM5Q71RC9 77 aa-1.4□□□□□ -2.63
NPAS3-208ENST00000550662 ADCY10Q96PN6 1610 aa-1.41□□□□□ -2.64
NPAS3-208ENST00000550662 ABCC8Q09428 1581 aa-1.42□□□□□ -2.64
NPAS3-208ENST00000550662 FANCD2Q9BXW9 1451 aa-1.44□□□□□ -2.64
NPAS3-208ENST00000550662 CD52P31358 61 aa-1.48□□□□□ -2.65
NPAS3-208ENST00000550662 CMC2Q9NRP2 79 aa-1.48□□□□□ -2.65
NPAS3-208ENST00000550662 NDUFA1O15239 70 aa-1.49□□□□□ -2.65
NPAS3-208ENST00000550662 DEFB133Q30KQ1 61 aa-1.5□□□□□ -2.65
NPAS3-208ENST00000550662 SMIM31A0A1B0GVY4 71 aa-1.56□□□□□ -2.66
NPAS3-208ENST00000550662 LINC01590Q5TEZ4 76 aa-1.57□□□□□ -2.66
NPAS3-208ENST00000550662 RHPN1-AS1Q9BWJ2 59 aa-1.58□□□□□ -2.66
NPAS3-208ENST00000550662 TOMM7Q9P0U1 55 aa-1.58□□□□□ -2.66
NPAS3-208ENST00000550662 LINC01556Q5JQF7 62 aa-1.59□□□□□ -2.66
NPAS3-208ENST00000550662 HTN1P15515 57 aa-1.6□□□□□ -2.67
NPAS3-208ENST00000550662 ERICH3Q5RHP9 1530 aa-1.62□□□□□ -2.67
NPAS3-208ENST00000550662 DEFB124Q8NES8 71 aa-1.63□□□□□ -2.67
NPAS3-208ENST00000550662 DUOX1Q9NRD9 1551 aa-1.64□□□□□ -2.67
NPAS3-208ENST00000550662 SAMD9LQ8IVG5 1584 aa-1.66□□□□□ -2.68
NPAS3-208ENST00000550662 A0A096LNI7 61 aa-1.66□□□□□ -2.68
NPAS3-208ENST00000550662 RPL39P62891 51 aaKnown RBP-1.71□□□□□ -2.68
NPAS3-208ENST00000550662 SNRPGP15A8MWD9 76 aa-1.72□□□□□ -2.68
NPAS3-208ENST00000550662 IQGAP2Q13576 1575 aa-1.73□□□□□ -2.69
NPAS3-208ENST00000550662 A0A096LPF7 62 aa-1.74□□□□□ -2.69
NPAS3-208ENST00000550662 TOP2AP11388 1531 aaKnown RBP-1.75□□□□□ -2.69
NPAS3-208ENST00000550662 ATP7AQ04656 1500 aa-1.75□□□□□ -2.69
NPAS3-208ENST00000550662 H3BSH0 61 aa-1.76□□□□□ -2.69
NPAS3-208ENST00000550662 APELAP0DMC3 54 aa-1.76□□□□□ -2.69
NPAS3-208ENST00000550662 HTN3P15516 51 aa-1.76□□□□□ -2.69
NPAS3-208ENST00000550662 RPL39LQ96EH5 51 aaKnown RBP-1.77□□□□□ -2.69
NPAS3-208ENST00000550662 MROH2BQ7Z745 1585 aa-1.78□□□□□ -2.69
NPAS3-208ENST00000550662 STATHP02808 62 aa-1.8□□□□□ -2.7
NPAS3-208ENST00000550662 H3BUX3 64 aa-1.84□□□□□ -2.7
NPAS3-208ENST00000550662 TOMM5Q8N4H5 51 aa-1.87□□□□□ -2.71
NPAS3-208ENST00000550662 DEFB108BQ8NET1 73 aa-1.87□□□□□ -2.71
NPAS3-208ENST00000550662 COX14Q96I36 57 aa-1.88□□□□□ -2.71
NPAS3-208ENST00000550662 DEFB108AA8MXU0 73 aa-1.89□□□□□ -2.71
NPAS3-208ENST00000550662 Q9Y3F1 56 aa-1.89□□□□□ -2.71
NPAS3-208ENST00000550662 PRCDQ00LT1 54 aa-1.99□□□□□ -2.73
NPAS3-208ENST00000550662 TMEM167AQ8TBQ9 72 aa-1.99□□□□□ -2.73
NPAS3-208ENST00000550662 K7EIM0 57 aa-2.02□□□□□ -2.73
NPAS3-208ENST00000550662 GCC2Q8IWJ2 1684 aa-2.09□□□□□ -2.74
NPAS3-208ENST00000550662 ARHGAP5-AS1Q96IT6 56 aa-2.11□□□□□ -2.75
NPAS3-208ENST00000550662 RPL39P5Q59GN2 51 aa-2.19□□□□□ -2.76
NPAS3-208ENST00000550662 SNRPGP62308 76 aaKnown RBP-2.2□□□□□ -2.76
Retrieved 78 of 20,778 RNA–protein pairs in 344.4 ms