RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 KRTAP4-2Q9BYR5 136 aa5.34□□□□□ -1.55
NUP188-211ENST00000550219 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
NUP188-211ENST00000550219 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
NUP188-211ENST00000550219 LCE4AQ5TA78 99 aa5.31□□□□□ -1.56
NUP188-211ENST00000550219 K7ERS5 55 aa5.28□□□□□ -1.56
NUP188-211ENST00000550219 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
NUP188-211ENST00000550219 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
NUP188-211ENST00000550219 BRK1Q8WUW1 75 aa5.14□□□□□ -1.59
NUP188-211ENST00000550219 TNP1P09430 55 aa5.1□□□□□ -1.59
NUP188-211ENST00000550219 ROMO1P60602 79 aa5.04□□□□□ -1.6
NUP188-211ENST00000550219 KRTAP25-1Q3LHN0 102 aa5.04□□□□□ -1.6
NUP188-211ENST00000550219 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
NUP188-211ENST00000550219 KRTAP19-7Q3SYF9 63 aa5.01□□□□□ -1.61
NUP188-211ENST00000550219 MT1EP04732 61 aa4.99□□□□□ -1.61
NUP188-211ENST00000550219 KRTAP19-3Q7Z4W3 81 aa4.99□□□□□ -1.61
NUP188-211ENST00000550219 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
NUP188-211ENST00000550219 DSTQ03001 7570 aaKnown RBP4.93□□□□□ -1.62
NUP188-211ENST00000550219 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
NUP188-211ENST00000550219 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
NUP188-211ENST00000550219 PRO0628Q9UI54 55 aa4.9□□□□□ -1.63
NUP188-211ENST00000550219 PMAIP1Q13794 54 aa4.87□□□□□ -1.63
NUP188-211ENST00000550219 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
NUP188-211ENST00000550219 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
NUP188-211ENST00000550219 MT1GP13640 62 aa4.82□□□□□ -1.64
NUP188-211ENST00000550219 PP632Q6XCG6 107 aa4.81□□□□□ -1.64
NUP188-211ENST00000550219 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
NUP188-211ENST00000550219 MT4P47944 62 aa4.78□□□□□ -1.64
NUP188-211ENST00000550219 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
NUP188-211ENST00000550219 MT1MQ8N339 61 aa4.77□□□□□ -1.65
NUP188-211ENST00000550219 MT1LQ93083 61 aa4.74□□□□□ -1.65
NUP188-211ENST00000550219 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
NUP188-211ENST00000550219 H3BS24 57 aa4.65□□□□□ -1.67
NUP188-211ENST00000550219 HMCN1Q96RW7 5635 aa4.63□□□□□ -1.67
NUP188-211ENST00000550219 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
NUP188-211ENST00000550219 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
NUP188-211ENST00000550219 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
NUP188-211ENST00000550219 KTN1-AS1Q86SY8 53 aa4.58□□□□□ -1.68
NUP188-211ENST00000550219 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
NUP188-211ENST00000550219 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
NUP188-211ENST00000550219 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
NUP188-211ENST00000550219 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
NUP188-211ENST00000550219 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
NUP188-211ENST00000550219 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
NUP188-211ENST00000550219 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
NUP188-211ENST00000550219 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
NUP188-211ENST00000550219 SVIPQ8NHG7 77 aa4.26□□□□□ -1.73
NUP188-211ENST00000550219 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
NUP188-211ENST00000550219 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
NUP188-211ENST00000550219 MT1AP04731 61 aa4.03□□□□□ -1.76
NUP188-211ENST00000550219 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
NUP188-211ENST00000550219 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
NUP188-211ENST00000550219 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
NUP188-211ENST00000550219 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
NUP188-211ENST00000550219 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
NUP188-211ENST00000550219 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
NUP188-211ENST00000550219 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
NUP188-211ENST00000550219 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
NUP188-211ENST00000550219 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
NUP188-211ENST00000550219 MT3P25713 68 aa3.68□□□□□ -1.82
NUP188-211ENST00000550219 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
NUP188-211ENST00000550219 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
NUP188-211ENST00000550219 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
NUP188-211ENST00000550219 NDUFAF8A1L188 74 aa3.46□□□□□ -1.86
NUP188-211ENST00000550219 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
NUP188-211ENST00000550219 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
NUP188-211ENST00000550219 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
NUP188-211ENST00000550219 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
NUP188-211ENST00000550219 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
NUP188-211ENST00000550219 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
NUP188-211ENST00000550219 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
NUP188-211ENST00000550219 INE1O15225 51 aa2.88□□□□□ -1.95
NUP188-211ENST00000550219 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
NUP188-211ENST00000550219 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
NUP188-211ENST00000550219 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
NUP188-211ENST00000550219 PRM1P04553 51 aa2.59□□□□□ -1.99
NUP188-211ENST00000550219 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
NUP188-211ENST00000550219 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
NUP188-211ENST00000550219 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 71.4 ms