RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 FREM2Q5SZK8 3169 aa-0.74□□□□□ -2.53
PRIM1-204ENST00000549549 ITPR2Q14571 2701 aa-0.74□□□□□ -2.53
PRIM1-204ENST00000549549 FRYLO94915 3013 aa-0.75□□□□□ -2.53
PRIM1-204ENST00000549549 ATMQ13315 3056 aa-0.77□□□□□ -2.53
PRIM1-204ENST00000549549 CEP250Q9BV73 2442 aa-0.77□□□□□ -2.53
PRIM1-204ENST00000549549 MT2AP02795 61 aa-0.78□□□□□ -2.53
PRIM1-204ENST00000549549 MT1MQ8N339 61 aa-0.78□□□□□ -2.53
PRIM1-204ENST00000549549 PCNTO95613 3336 aa-0.78□□□□□ -2.53
PRIM1-204ENST00000549549 WDFY4Q6ZS81 3184 aa-0.8□□□□□ -2.54
PRIM1-204ENST00000549549 ATP7AQ04656 1500 aa-0.8□□□□□ -2.54
PRIM1-204ENST00000549549 WDFY3Q8IZQ1 3526 aa-0.8□□□□□ -2.54
PRIM1-204ENST00000549549 MUC3AQ02505 3323 aa-0.82□□□□□ -2.54
PRIM1-204ENST00000549549 TOMM7Q9P0U1 55 aa-0.82□□□□□ -2.54
PRIM1-204ENST00000549549 CEP350Q5VT06 3117 aa-0.82□□□□□ -2.54
PRIM1-204ENST00000549549 DMDP11532 3685 aa-0.82□□□□□ -2.54
PRIM1-204ENST00000549549 TOMM5Q8N4H5 51 aa-0.83□□□□□ -2.54
PRIM1-204ENST00000549549 XIRP2A4UGR9 3374 aa-0.83□□□□□ -2.54
PRIM1-204ENST00000549549 SPEGQ15772 3267 aa-0.83□□□□□ -2.54
PRIM1-204ENST00000549549 SAMD9LQ8IVG5 1584 aa-0.83□□□□□ -2.54
PRIM1-204ENST00000549549 SZT2Q5T011 3432 aa-0.84□□□□□ -2.54
PRIM1-204ENST00000549549 BOD1L1Q8NFC6 3051 aa-0.84□□□□□ -2.54
PRIM1-204ENST00000549549 DUOX1Q9NRD9 1551 aa-0.86□□□□□ -2.55
PRIM1-204ENST00000549549 RPS29P62273 56 aaKnown RBP-0.87□□□□□ -2.55
PRIM1-204ENST00000549549 MT1BP07438 61 aa-0.89□□□□□ -2.55
PRIM1-204ENST00000549549 MROH2BQ7Z745 1585 aa-0.89□□□□□ -2.55
PRIM1-204ENST00000549549 ABCA13Q86UQ4 5058 aa-0.9□□□□□ -2.55
PRIM1-204ENST00000549549 RPL39P62891 51 aaKnown RBP-0.9□□□□□ -2.55
PRIM1-204ENST00000549549 LINC01590Q5TEZ4 76 aa-0.9□□□□□ -2.55
PRIM1-204ENST00000549549 TOP2AP11388 1531 aaKnown RBP-0.93□□□□□ -2.56
PRIM1-204ENST00000549549 RHPN1-AS1Q9BWJ2 59 aa-0.93□□□□□ -2.56
PRIM1-204ENST00000549549 RPL39LQ96EH5 51 aaKnown RBP-0.95□□□□□ -2.56
PRIM1-204ENST00000549549 DCHS1Q96JQ0 3298 aa-0.96□□□□□ -2.56
PRIM1-204ENST00000549549 MKI67P46013 3256 aaKnown RBP-0.97□□□□□ -2.57
PRIM1-204ENST00000549549 USP34Q70CQ2 3546 aa-0.98□□□□□ -2.57
PRIM1-204ENST00000549549 EP400Q96L91 3159 aa-0.98□□□□□ -2.57
PRIM1-204ENST00000549549 DEFB133Q30KQ1 61 aa-1□□□□□ -2.57
PRIM1-204ENST00000549549 CENPEQ02224 2701 aa-1.02□□□□□ -2.57
PRIM1-204ENST00000549549 DNAH12Q6ZR08 3092 aa-1.02□□□□□ -2.57
PRIM1-204ENST00000549549 ASPMQ8IZT6 3477 aa-1.02□□□□□ -2.57
PRIM1-204ENST00000549549 A0A096LNI7 61 aa-1.02□□□□□ -2.57
PRIM1-204ENST00000549549 HTN1P15515 57 aa-1.02□□□□□ -2.57
PRIM1-204ENST00000549549 LOC400499M0QZD8 3231 aa-1.03□□□□□ -2.57
PRIM1-204ENST00000549549 KRTAP20-1Q3LI63 56 aa-1.04□□□□□ -2.58
PRIM1-204ENST00000549549 MT1FP04733 61 aa-1.05□□□□□ -2.58
PRIM1-204ENST00000549549 GCC2Q8IWJ2 1684 aa-1.06□□□□□ -2.58
PRIM1-204ENST00000549549 TTTY10Q9BZA0 68 aa-1.07□□□□□ -2.58
PRIM1-204ENST00000549549 DEFB104AQ8WTQ1 72 aa-1.08□□□□□ -2.58
PRIM1-204ENST00000549549 UNC80Q8N2C7 3258 aa-1.08□□□□□ -2.58
PRIM1-204ENST00000549549 DNAH14Q0VDD8 3507 aa-1.09□□□□□ -2.58
PRIM1-204ENST00000549549 DEFB124Q8NES8 71 aa-1.09□□□□□ -2.58
PRIM1-204ENST00000549549 CFAP47Q6ZTR5 3102 aa-1.1□□□□□ -2.59
PRIM1-204ENST00000549549 BRCA2P51587 3418 aa-1.11□□□□□ -2.59
PRIM1-204ENST00000549549 CD52P31358 61 aa-1.12□□□□□ -2.59
PRIM1-204ENST00000549549 VCANP13611 3396 aa-1.16□□□□□ -2.6
PRIM1-204ENST00000549549 H3BUX3 64 aa-1.19□□□□□ -2.6
PRIM1-204ENST00000549549 SNRPGP62308 76 aaKnown RBP-1.2□□□□□ -2.6
PRIM1-204ENST00000549549 KRTAP19-6Q3LI70 58 aa-1.2□□□□□ -2.6
PRIM1-204ENST00000549549 CENPFP49454 3210 aa-1.2□□□□□ -2.6
PRIM1-204ENST00000549549 K7EIM0 57 aa-1.25□□□□□ -2.61
PRIM1-204ENST00000549549 PRCDQ00LT1 54 aa-1.27□□□□□ -2.61
PRIM1-204ENST00000549549 ARHGAP5-AS1Q96IT6 56 aa-1.27□□□□□ -2.61
PRIM1-204ENST00000549549 CDH23Q9H251 3354 aa-1.28□□□□□ -2.61
PRIM1-204ENST00000549549 LINC01556Q5JQF7 62 aa-1.29□□□□□ -2.62
PRIM1-204ENST00000549549 VPS13AQ96RL7 3174 aa-1.35□□□□□ -2.62
PRIM1-204ENST00000549549 KRTAP19-2Q3LHN2 52 aa-1.37□□□□□ -2.63
PRIM1-204ENST00000549549 UTRNP46939 3433 aa-1.4□□□□□ -2.63
PRIM1-204ENST00000549549 TMEM167AQ8TBQ9 72 aa-1.41□□□□□ -2.64
PRIM1-204ENST00000549549 A0A096LPF7 62 aa-1.43□□□□□ -2.64
PRIM1-204ENST00000549549 H3BSH0 61 aa-1.43□□□□□ -2.64
PRIM1-204ENST00000549549 APELAP0DMC3 54 aa-1.43□□□□□ -2.64
PRIM1-204ENST00000549549 RPL39P5Q59GN2 51 aa-1.48□□□□□ -2.65
PRIM1-204ENST00000549549 DEFB108AA8MXU0 73 aa-1.54□□□□□ -2.66
PRIM1-204ENST00000549549 GOLGB1Q14789 3259 aaKnown RBP-1.54□□□□□ -2.66
PRIM1-204ENST00000549549 HTN3P15516 51 aa-1.58□□□□□ -2.66
PRIM1-204ENST00000549549 Q9Y3F1 56 aa-1.65□□□□□ -2.67
PRIM1-204ENST00000549549 DEFB108BQ8NET1 73 aa-1.83□□□□□ -2.7
PRIM1-204ENST00000549549 COX14Q96I36 57 aa-1.84□□□□□ -2.7
PRIM1-204ENST00000549549 STATHP02808 62 aa-2.06□□□□□ -2.74
Retrieved 78 of 20,778 RNA–protein pairs in 36.7 ms