RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 HIST1H2BJP06899 126 aa0.4□□□□□ -2.35
DEPDC4-204ENST00000547823 COX8AP10176 69 aa0.4□□□□□ -2.35
DEPDC4-204ENST00000547823 HIST1H2BOP23527 126 aa0.4□□□□□ -2.35
DEPDC4-204ENST00000547823 HIST1H2BBP33778 126 aa0.4□□□□□ -2.35
DEPDC4-204ENST00000547823 FXYD2P54710 66 aa0.4□□□□□ -2.35
DEPDC4-204ENST00000547823 MP68P56378 58 aa0.4□□□□□ -2.35
DEPDC4-204ENST00000547823 HIST1H2BDP58876 126 aa0.4□□□□□ -2.35
DEPDC4-204ENST00000547823 HIST1H2BCP62807 126 aa0.4□□□□□ -2.35
DEPDC4-204ENST00000547823 HIST2H2BEQ16778 126 aa0.4□□□□□ -2.35
DEPDC4-204ENST00000547823 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.4□□□□□ -2.35
DEPDC4-204ENST00000547823 HIST1H2BHQ93079 126 aa0.4□□□□□ -2.35
DEPDC4-204ENST00000547823 HIST1H2BNQ99877 126 aa0.4□□□□□ -2.35
DEPDC4-204ENST00000547823 HIST1H2BMQ99879 126 aa0.4□□□□□ -2.35
DEPDC4-204ENST00000547823 TRAV7A0A075B6U4 112 aa0.39□□□□□ -2.35
DEPDC4-204ENST00000547823 H0Y9P7 68 aa0.39□□□□□ -2.35
DEPDC4-204ENST00000547823 ATOX1O00244 68 aa0.39□□□□□ -2.35
DEPDC4-204ENST00000547823 ATXN8Q156A1 80 aa0.39□□□□□ -2.35
DEPDC4-204ENST00000547823 SVBPQ8N300 66 aa0.39□□□□□ -2.35
DEPDC4-204ENST00000547823 DMAC1Q96GE9 116 aa0.39□□□□□ -2.35
DEPDC4-204ENST00000547823 LINC00208Q96KT6 92 aa0.39□□□□□ -2.35
DEPDC4-204ENST00000547823 SPCS1Q9Y6A9 102 aa0.39□□□□□ -2.35
DEPDC4-204ENST00000547823 NDUFA5Q16718 116 aa0.38□□□□□ -2.35
DEPDC4-204ENST00000547823 COA5Q86WW8 74 aa0.38□□□□□ -2.35
DEPDC4-204ENST00000547823 TSTD3H0UI37 97 aa0.37□□□□□ -2.35
DEPDC4-204ENST00000547823 UQCRQO14949 82 aa0.37□□□□□ -2.35
DEPDC4-204ENST00000547823 SPTSSBQ8NFR3 76 aa0.37□□□□□ -2.35
DEPDC4-204ENST00000547823 C14orf144Q96I85 54 aa0.37□□□□□ -2.35
DEPDC4-204ENST00000547823 SPATA8Q6RVD6 105 aa0.36□□□□□ -2.35
DEPDC4-204ENST00000547823 VAMP8Q9BV40 100 aa0.36□□□□□ -2.35
DEPDC4-204ENST00000547823 H3BPC8 53 aa0.35□□□□□ -2.35
DEPDC4-204ENST00000547823 UBL5Q9BZL1 73 aa0.35□□□□□ -2.35
DEPDC4-204ENST00000547823 HSD52Q0P140 79 aa0.34□□□□□ -2.36
DEPDC4-204ENST00000547823 SCGB1A1P11684 91 aa0.33□□□□□ -2.36
DEPDC4-204ENST00000547823 ACYP2P14621 99 aa0.33□□□□□ -2.36
DEPDC4-204ENST00000547823 SPATA45Q537H7 98 aa0.33□□□□□ -2.36
DEPDC4-204ENST00000547823 CHKB-CPT1BH3BT56 60 aa0.32□□□□□ -2.36
DEPDC4-204ENST00000547823 TAX1BP3O14907 124 aa0.32□□□□□ -2.36
DEPDC4-204ENST00000547823 H3BT86 120 aa0.31□□□□□ -2.36
DEPDC4-204ENST00000547823 SERP1Q9Y6X1 66 aa0.28□□□□□ -2.36
DEPDC4-204ENST00000547823 H7BZZ5 65 aa0.26□□□□□ -2.37
DEPDC4-204ENST00000547823 TMEM258P61165 79 aa0.26□□□□□ -2.37
DEPDC4-204ENST00000547823 HIST1H4AP62805 103 aaKnown RBP0.26□□□□□ -2.37
DEPDC4-204ENST00000547823 S100A6P06703 90 aa0.24□□□□□ -2.37
DEPDC4-204ENST00000547823 S100A1P23297 94 aa0.24□□□□□ -2.37
DEPDC4-204ENST00000547823 UQCR10Q9UDW1 63 aa0.24□□□□□ -2.37
DEPDC4-204ENST00000547823 Q1T7F1 81 aa0.23□□□□□ -2.37
DEPDC4-204ENST00000547823 SERP2Q8N6R1 65 aa0.23□□□□□ -2.37
DEPDC4-204ENST00000547823 ATP5EP2Q5VTU8 51 aa0.22□□□□□ -2.37
DEPDC4-204ENST00000547823 KTN1-AS1Q86SY8 53 aa0.22□□□□□ -2.37
DEPDC4-204ENST00000547823 M0R143 59 aa0.21□□□□□ -2.38
DEPDC4-204ENST00000547823 RPS28P62857 69 aaKnown RBP0.21□□□□□ -2.38
DEPDC4-204ENST00000547823 PRR15LQ9BU68 103 aa0.2□□□□□ -2.38
DEPDC4-204ENST00000547823 A0A1B0GU69 56 aa0.19□□□□□ -2.38
DEPDC4-204ENST00000547823 PYY3Q5JQD4 70 aa0.19□□□□□ -2.38
DEPDC4-204ENST00000547823 ETDBQ3ZM63 59 aa0.16□□□□□ -2.38
DEPDC4-204ENST00000547823 LINC00643Q86TS7 51 aa0.16□□□□□ -2.38
DEPDC4-204ENST00000547823 SNURFQ9Y675 71 aa0.15□□□□□ -2.39
DEPDC4-204ENST00000547823 F8W1H4 67 aa0.12□□□□□ -2.39
DEPDC4-204ENST00000547823 SMIM20Q8N5G0 67 aa0.1□□□□□ -2.39
DEPDC4-204ENST00000547823 UQCR11O14957 56 aa0.09□□□□□ -2.4
DEPDC4-204ENST00000547823 GTF2H5Q6ZYL4 71 aa0.09□□□□□ -2.4
DEPDC4-204ENST00000547823 MIR22HGQ0VDD5 57 aa0.08□□□□□ -2.4
DEPDC4-204ENST00000547823 CDC42SE1Q9NRR8 79 aa0.08□□□□□ -2.4
DEPDC4-204ENST00000547823 ROMO1P60602 79 aa0.07□□□□□ -2.4
DEPDC4-204ENST00000547823 INE1O15225 51 aa0.06□□□□□ -2.4
DEPDC4-204ENST00000547823 LINC01558Q9Y6Z2 57 aa0.06□□□□□ -2.4
DEPDC4-204ENST00000547823 PMAIP1Q13794 54 aa0.05□□□□□ -2.4
DEPDC4-204ENST00000547823 COL5A1-AS1Q5SY13 56 aa0.05□□□□□ -2.4
DEPDC4-204ENST00000547823 PRM1P04553 51 aa0.02□□□□□ -2.41
DEPDC4-204ENST00000547823 SMIM6P0DI80 62 aa0.01□□□□□ -2.41
DEPDC4-204ENST00000547823 J3QR89 54 aa-0.04□□□□□ -2.42
DEPDC4-204ENST00000547823 COX7CP15954 63 aa-0.05□□□□□ -2.42
DEPDC4-204ENST00000547823 ATP5EP56381 51 aaPredicted RBP-0.1□□□□□ -2.43
DEPDC4-204ENST00000547823 A0A1B0GV90 55 aa-0.12□□□□□ -2.43
DEPDC4-204ENST00000547823 LOC105371267A0A1B0GV96 52 aa-0.14□□□□□ -2.43
DEPDC4-204ENST00000547823 K7ERU9 68 aa-0.16□□□□□ -2.44
DEPDC4-204ENST00000547823 CCDC179H3BU77 68 aa-0.17□□□□□ -2.44
DEPDC4-204ENST00000547823 BRK1Q8WUW1 75 aa-0.25□□□□□ -2.45
Retrieved 78 of 20,778 RNA–protein pairs in 52.7 ms