RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 FXYD6Q9H0Q3 95 aa0.87□□□□□ -2.27
SCAF11-210ENST00000547654 SPINK4O60575 86 aa0.86□□□□□ -2.27
SCAF11-210ENST00000547654 PRCDQ00LT1 54 aa0.86□□□□□ -2.27
SCAF11-210ENST00000547654 SFTA3P0C7M3 94 aa0.85□□□□□ -2.27
SCAF11-210ENST00000547654 WT1-ASQ06250 92 aa0.85□□□□□ -2.27
SCAF11-210ENST00000547654 KRTAP20-2Q3LI61 65 aa0.85□□□□□ -2.27
SCAF11-210ENST00000547654 ENHOQ6UWT2 76 aa0.85□□□□□ -2.27
SCAF11-210ENST00000547654 DEFB105AQ8NG35 78 aa0.85□□□□□ -2.27
SCAF11-210ENST00000547654 H3BVH4 76 aa0.84□□□□□ -2.27
SCAF11-210ENST00000547654 NREPQ16612 68 aa0.84□□□□□ -2.27
SCAF11-210ENST00000547654 TTTY10Q9BZA0 68 aa0.84□□□□□ -2.27
SCAF11-210ENST00000547654 CDKN2A-AS1Q9UH64 79 aa0.81□□□□□ -2.28
SCAF11-210ENST00000547654 SYNE1Q8NF91 8797 aaKnown RBP0.81□□□□□ -2.28
SCAF11-210ENST00000547654 CMC2Q9NRP2 79 aa0.8□□□□□ -2.28
SCAF11-210ENST00000547654 ABRACLQ9P1F3 81 aa0.8□□□□□ -2.28
SCAF11-210ENST00000547654 SNRPGP62308 76 aaKnown RBP0.79□□□□□ -2.28
SCAF11-210ENST00000547654 KRTAP19-8Q3LI54 63 aa0.79□□□□□ -2.28
SCAF11-210ENST00000547654 CLPSL2Q6UWE3 100 aa0.79□□□□□ -2.28
SCAF11-210ENST00000547654 C9orf92A6NGG3 77 aa0.78□□□□□ -2.28
SCAF11-210ENST00000547654 H1FX-AS1Q4G0G2 97 aa0.78□□□□□ -2.28
SCAF11-210ENST00000547654 A0A087WWC5 75 aa0.77□□□□□ -2.29
SCAF11-210ENST00000547654 RPS29P62273 56 aaKnown RBP0.75□□□□□ -2.29
SCAF11-210ENST00000547654 GNG13Q9P2W3 67 aa0.75□□□□□ -2.29
SCAF11-210ENST00000547654 ATXN8Q156A1 80 aa0.74□□□□□ -2.29
SCAF11-210ENST00000547654 SMIM31A0A1B0GVY4 71 aa0.73□□□□□ -2.29
SCAF11-210ENST00000547654 MT1XP80297 61 aa0.73□□□□□ -2.29
SCAF11-210ENST00000547654 SPRR2GQ9BYE4 73 aa0.72□□□□□ -2.29
SCAF11-210ENST00000547654 WFDC13Q8IUB5 93 aa0.71□□□□□ -2.3
SCAF11-210ENST00000547654 ARHGAP5-AS1Q96IT6 56 aa0.71□□□□□ -2.3
SCAF11-210ENST00000547654 C3orf79P0CE67 100 aa0.7□□□□□ -2.3
SCAF11-210ENST00000547654 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
SCAF11-210ENST00000547654 PRLHP81277 87 aa0.67□□□□□ -2.3
SCAF11-210ENST00000547654 UBL5Q9BZL1 73 aa0.67□□□□□ -2.3
SCAF11-210ENST00000547654 SNRPGP15A8MWD9 76 aa0.66□□□□□ -2.3
SCAF11-210ENST00000547654 MT1EP04732 61 aa0.66□□□□□ -2.3
SCAF11-210ENST00000547654 KRTAP19-7Q3SYF9 63 aa0.66□□□□□ -2.3
SCAF11-210ENST00000547654 MT1MQ8N339 61 aa0.65□□□□□ -2.31
SCAF11-210ENST00000547654 LINC00158P58513 81 aa0.64□□□□□ -2.31
SCAF11-210ENST00000547654 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
SCAF11-210ENST00000547654 C6orf48Q9UBA6 75 aa0.64□□□□□ -2.31
SCAF11-210ENST00000547654 MT1GP13640 62 aa0.63□□□□□ -2.31
SCAF11-210ENST00000547654 KCNQ1DNQ9H478 68 aa0.63□□□□□ -2.31
SCAF11-210ENST00000547654 H0YAA0 97 aa0.62□□□□□ -2.31
SCAF11-210ENST00000547654 S100ZQ8WXG8 99 aa0.62□□□□□ -2.31
SCAF11-210ENST00000547654 NDUFA1O15239 70 aa0.6□□□□□ -2.31
SCAF11-210ENST00000547654 ETDCA0A1B0GVM5 59 aa0.59□□□□□ -2.31
SCAF11-210ENST00000547654 LINC01549A6NIU2 74 aa0.57□□□□□ -2.32
SCAF11-210ENST00000547654 CRIP1P50238 77 aa0.56□□□□□ -2.32
SCAF11-210ENST00000547654 MT1LQ93083 61 aa0.56□□□□□ -2.32
SCAF11-210ENST00000547654 M0QY20 66 aa0.55□□□□□ -2.32
SCAF11-210ENST00000547654 IAPPP10997 89 aa0.54□□□□□ -2.32
SCAF11-210ENST00000547654 KRTAP6-2Q3LI66 62 aa0.54□□□□□ -2.32
SCAF11-210ENST00000547654 PRM1P04553 51 aa0.51□□□□□ -2.33
SCAF11-210ENST00000547654 KRTAP6-1Q3LI64 71 aa0.5□□□□□ -2.33
SCAF11-210ENST00000547654 KRTAP19-5Q3LI72 72 aa0.5□□□□□ -2.33
SCAF11-210ENST00000547654 NMES1Q9C002 83 aa0.5□□□□□ -2.33
SCAF11-210ENST00000547654 RPL39LQ96EH5 51 aaKnown RBP0.48□□□□□ -2.33
SCAF11-210ENST00000547654 K7EMI3 77 aa0.47□□□□□ -2.33
SCAF11-210ENST00000547654 MT1AP04731 61 aa0.46□□□□□ -2.34
SCAF11-210ENST00000547654 FCER1GP30273 86 aa0.46□□□□□ -2.34
SCAF11-210ENST00000547654 SERF2P84101 59 aa0.46□□□□□ -2.34
SCAF11-210ENST00000547654 TOMM7Q9P0U1 55 aa0.44□□□□□ -2.34
SCAF11-210ENST00000547654 POLR2KP53803 58 aaKnown RBP0.42□□□□□ -2.34
SCAF11-210ENST00000547654 RPL39P62891 51 aaKnown RBP0.42□□□□□ -2.34
SCAF11-210ENST00000547654 S4R3F8 94 aa0.38□□□□□ -2.35
SCAF11-210ENST00000547654 IGLV5-48A0A075B6I7 105 aa0.36□□□□□ -2.35
SCAF11-210ENST00000547654 TMEM167BQ9NRX6 74 aa0.34□□□□□ -2.36
SCAF11-210ENST00000547654 SMIM2Q9BVW6 85 aa0.32□□□□□ -2.36
SCAF11-210ENST00000547654 M0QZ58 72 aa0.31□□□□□ -2.36
SCAF11-210ENST00000547654 IGIPA6NJ69 53 aa0.3□□□□□ -2.36
SCAF11-210ENST00000547654 H0YGX0 51 aa0.27□□□□□ -2.37
SCAF11-210ENST00000547654 LINC01546A6NGU7 62 aa0.24□□□□□ -2.37
SCAF11-210ENST00000547654 LINC00308Q8TCZ7 52 aa0.24□□□□□ -2.37
SCAF11-210ENST00000547654 TOMM5Q8N4H5 51 aa0.21□□□□□ -2.38
SCAF11-210ENST00000547654 PLNP26678 52 aa0.2□□□□□ -2.38
SCAF11-210ENST00000547654 MMP24-AS1A0A0U1RRL7 71 aa0.17□□□□□ -2.38
SCAF11-210ENST00000547654 SMIM27A0A1W2PRY6 76 aa0.15□□□□□ -2.39
SCAF11-210ENST00000547654 TNP1P09430 55 aa0.08□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms