RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
BEST3-208ENST00000547208 SPATA8Q6RVD6 105 aa4.23□□□□□ -1.73
BEST3-208ENST00000547208 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
BEST3-208ENST00000547208 ACYP2P14621 99 aa4.21□□□□□ -1.74
BEST3-208ENST00000547208 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
BEST3-208ENST00000547208 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
BEST3-208ENST00000547208 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
BEST3-208ENST00000547208 A0A1B0GU69 56 aa4.16□□□□□ -1.74
BEST3-208ENST00000547208 UQCR11O14957 56 aa4.16□□□□□ -1.74
BEST3-208ENST00000547208 KRTAP10-7P60409 375 aaPredicted RBP4.15□□□□□ -1.75
BEST3-208ENST00000547208 MIR22HGQ0VDD5 57 aa4.15□□□□□ -1.75
BEST3-208ENST00000547208 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
BEST3-208ENST00000547208 SPRR2DP22532 72 aa4.12□□□□□ -1.75
BEST3-208ENST00000547208 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.76
BEST3-208ENST00000547208 KRTAP13-4Q3LI77 160 aa4.05□□□□□ -1.76
BEST3-208ENST00000547208 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
BEST3-208ENST00000547208 ROMO1P60602 79 aa4.01□□□□□ -1.77
BEST3-208ENST00000547208 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
BEST3-208ENST00000547208 K7ERS5 55 aa3.91□□□□□ -1.78
BEST3-208ENST00000547208 MT3P25713 68 aa3.9□□□□□ -1.79
BEST3-208ENST00000547208 KRTAP19-7Q3SYF9 63 aa3.9□□□□□ -1.79
BEST3-208ENST00000547208 A0A0D9SG42 100 aa3.86□□□□□ -1.79
BEST3-208ENST00000547208 A0A1B0GU33 70 aa3.85□□□□□ -1.79
BEST3-208ENST00000547208 MT1EP04732 61 aa3.85□□□□□ -1.79
BEST3-208ENST00000547208 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
BEST3-208ENST00000547208 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
BEST3-208ENST00000547208 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
BEST3-208ENST00000547208 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
BEST3-208ENST00000547208 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
BEST3-208ENST00000547208 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
BEST3-208ENST00000547208 MT4P47944 62 aa3.72□□□□□ -1.81
BEST3-208ENST00000547208 MT1GP13640 62 aa3.71□□□□□ -1.82
BEST3-208ENST00000547208 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
BEST3-208ENST00000547208 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
BEST3-208ENST00000547208 MT1LQ93083 61 aa3.68□□□□□ -1.82
BEST3-208ENST00000547208 MT1MQ8N339 61 aa3.67□□□□□ -1.82
BEST3-208ENST00000547208 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
BEST3-208ENST00000547208 LCE3AQ5TA76 89 aa3.65□□□□□ -1.83
BEST3-208ENST00000547208 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
BEST3-208ENST00000547208 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
BEST3-208ENST00000547208 TNP1P09430 55 aa3.61□□□□□ -1.83
BEST3-208ENST00000547208 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
BEST3-208ENST00000547208 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
BEST3-208ENST00000547208 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
BEST3-208ENST00000547208 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
BEST3-208ENST00000547208 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
BEST3-208ENST00000547208 KRTAP12-3P60328 96 aa3.5□□□□□ -1.85
BEST3-208ENST00000547208 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
BEST3-208ENST00000547208 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
BEST3-208ENST00000547208 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
BEST3-208ENST00000547208 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
BEST3-208ENST00000547208 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.87
BEST3-208ENST00000547208 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
BEST3-208ENST00000547208 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
BEST3-208ENST00000547208 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
BEST3-208ENST00000547208 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
BEST3-208ENST00000547208 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
BEST3-208ENST00000547208 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
BEST3-208ENST00000547208 INE1O15225 51 aa3.14□□□□□ -1.91
BEST3-208ENST00000547208 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
BEST3-208ENST00000547208 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
BEST3-208ENST00000547208 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
BEST3-208ENST00000547208 MT1AP04731 61 aa3.11□□□□□ -1.91
BEST3-208ENST00000547208 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
BEST3-208ENST00000547208 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
BEST3-208ENST00000547208 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
BEST3-208ENST00000547208 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
BEST3-208ENST00000547208 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
BEST3-208ENST00000547208 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
BEST3-208ENST00000547208 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
BEST3-208ENST00000547208 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
BEST3-208ENST00000547208 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
BEST3-208ENST00000547208 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
BEST3-208ENST00000547208 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
BEST3-208ENST00000547208 PRM1P04553 51 aa2.01□□□□□ -2.09
BEST3-208ENST00000547208 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
BEST3-208ENST00000547208 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
BEST3-208ENST00000547208 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 66.8 ms