RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 RPL37P61927 97 aaKnown RBP3.35□□□□□ -1.87
CCDC60-205ENST00000546345 KMT2DO14686 5537 aa3.33□□□□□ -1.88
CCDC60-205ENST00000546345 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
CCDC60-205ENST00000546345 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
CCDC60-205ENST00000546345 C20orf166-AS1Q96NR2 134 aa3.3□□□□□ -1.88
CCDC60-205ENST00000546345 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
CCDC60-205ENST00000546345 KRTAP10-10P60014 251 aa3.29□□□□□ -1.88
CCDC60-205ENST00000546345 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
CCDC60-205ENST00000546345 KRTAP12-2P59991 146 aa3.26□□□□□ -1.89
CCDC60-205ENST00000546345 CRIPTQ9P021 101 aa3.26□□□□□ -1.89
CCDC60-205ENST00000546345 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
CCDC60-205ENST00000546345 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
CCDC60-205ENST00000546345 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
CCDC60-205ENST00000546345 P0C880 135 aa3.24□□□□□ -1.89
CCDC60-205ENST00000546345 M0QZ58 72 aa3.16□□□□□ -1.9
CCDC60-205ENST00000546345 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
CCDC60-205ENST00000546345 S4R3F8 94 aa3.12□□□□□ -1.91
CCDC60-205ENST00000546345 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
CCDC60-205ENST00000546345 SPRR2EP22531 72 aa3.06□□□□□ -1.92
CCDC60-205ENST00000546345 SPRR2BP35325 72 aa3.06□□□□□ -1.92
CCDC60-205ENST00000546345 SPRR2AP35326 72 aa3.06□□□□□ -1.92
CCDC60-205ENST00000546345 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
CCDC60-205ENST00000546345 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
CCDC60-205ENST00000546345 MT1BP07438 61 aa3.04□□□□□ -1.92
CCDC60-205ENST00000546345 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
CCDC60-205ENST00000546345 KRTAP13-4Q3LI77 160 aa3.03□□□□□ -1.92
CCDC60-205ENST00000546345 A0A0D9SG42 100 aa3.01□□□□□ -1.93
CCDC60-205ENST00000546345 PLAC4Q8WY50 150 aa3.01□□□□□ -1.93
CCDC60-205ENST00000546345 LCE3AQ5TA76 89 aa3□□□□□ -1.93
CCDC60-205ENST00000546345 SPRR2FQ96RM1 72 aa3□□□□□ -1.93
CCDC60-205ENST00000546345 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
CCDC60-205ENST00000546345 CAMK2N1Q7Z7J9 78 aa2.97□□□□□ -1.93
CCDC60-205ENST00000546345 SPRR2DP22532 72 aa2.96□□□□□ -1.94
CCDC60-205ENST00000546345 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
CCDC60-205ENST00000546345 KRTAP19-8Q3LI54 63 aa2.93□□□□□ -1.94
CCDC60-205ENST00000546345 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
CCDC60-205ENST00000546345 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
CCDC60-205ENST00000546345 R4GN34 69 aa2.89□□□□□ -1.95
CCDC60-205ENST00000546345 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
CCDC60-205ENST00000546345 SPRR2GQ9BYE4 73 aa2.86□□□□□ -1.95
CCDC60-205ENST00000546345 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
CCDC60-205ENST00000546345 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
CCDC60-205ENST00000546345 INE1O15225 51 aa2.81□□□□□ -1.96
CCDC60-205ENST00000546345 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
CCDC60-205ENST00000546345 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
CCDC60-205ENST00000546345 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
CCDC60-205ENST00000546345 TNP1P09430 55 aa2.78□□□□□ -1.96
CCDC60-205ENST00000546345 MT1XP80297 61 aa2.74□□□□□ -1.97
CCDC60-205ENST00000546345 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
CCDC60-205ENST00000546345 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
CCDC60-205ENST00000546345 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
CCDC60-205ENST00000546345 MT4P47944 62 aa2.64□□□□□ -1.99
CCDC60-205ENST00000546345 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
CCDC60-205ENST00000546345 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
CCDC60-205ENST00000546345 KRTAP5-8O75690 187 aa2.54□□□□□ -2
CCDC60-205ENST00000546345 KRTAP19-3Q7Z4W3 81 aa2.49□□□□□ -2.01
CCDC60-205ENST00000546345 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
CCDC60-205ENST00000546345 KRTAP19-7Q3SYF9 63 aa2.47□□□□□ -2.01
CCDC60-205ENST00000546345 MT1EP04732 61 aa2.45□□□□□ -2.02
CCDC60-205ENST00000546345 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
CCDC60-205ENST00000546345 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
CCDC60-205ENST00000546345 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
CCDC60-205ENST00000546345 KRTAP12-3P60328 96 aa2.38□□□□□ -2.03
CCDC60-205ENST00000546345 MT1MQ8N339 61 aa2.36□□□□□ -2.03
CCDC60-205ENST00000546345 MT1GP13640 62 aa2.34□□□□□ -2.03
CCDC60-205ENST00000546345 MT1LQ93083 61 aa2.26□□□□□ -2.05
CCDC60-205ENST00000546345 KRTAP19-5Q3LI72 72 aa2.24□□□□□ -2.05
CCDC60-205ENST00000546345 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
CCDC60-205ENST00000546345 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
CCDC60-205ENST00000546345 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
CCDC60-205ENST00000546345 MT1AP04731 61 aa1.94□□□□□ -2.1
CCDC60-205ENST00000546345 KRTAP6-1Q3LI64 71 aa1.94□□□□□ -2.1
CCDC60-205ENST00000546345 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
CCDC60-205ENST00000546345 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
CCDC60-205ENST00000546345 PRM1P04553 51 aa1.71□□□□□ -2.14
CCDC60-205ENST00000546345 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
CCDC60-205ENST00000546345 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
CCDC60-205ENST00000546345 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 49.2 ms