RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 GPR98Q8WXG9 6306 aa1.15□□□□□ -2.22
SNHG1-222ENST00000545308 PMCHL2Q9BQD1 86 aa1.15□□□□□ -2.23
SNHG1-222ENST00000545308 SYS1-DBNDD2H3BUS1 97 aa1.14□□□□□ -2.23
SNHG1-222ENST00000545308 RBM3P98179 157 aaKnown RBP1.14□□□□□ -2.23
SNHG1-222ENST00000545308 PYY3Q5JQD4 70 aa1.14□□□□□ -2.23
SNHG1-222ENST00000545308 C20orf197Q8N268 126 aa1.14□□□□□ -2.23
SNHG1-222ENST00000545308 MRPL34Q9BQ48 92 aaKnown RBP1.14□□□□□ -2.23
SNHG1-222ENST00000545308 COX6CP09669 75 aa1.13□□□□□ -2.23
SNHG1-222ENST00000545308 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
SNHG1-222ENST00000545308 SVBPQ8N300 66 aa1.13□□□□□ -2.23
SNHG1-222ENST00000545308 SERP1Q9Y6X1 66 aa1.13□□□□□ -2.23
SNHG1-222ENST00000545308 M0R143 59 aa1.12□□□□□ -2.23
SNHG1-222ENST00000545308 H0YAA0 97 aa1.11□□□□□ -2.23
SNHG1-222ENST00000545308 NDUFC1O43677 76 aa1.1□□□□□ -2.23
SNHG1-222ENST00000545308 APOC3P02656 99 aa1.1□□□□□ -2.23
SNHG1-222ENST00000545308 MT4P47944 62 aa1.1□□□□□ -2.23
SNHG1-222ENST00000545308 MT1XP80297 61 aa1.1□□□□□ -2.23
SNHG1-222ENST00000545308 NREPQ16612 68 aa1.1□□□□□ -2.23
SNHG1-222ENST00000545308 HCG22E2RYF7 251 aa1.09□□□□□ -2.23
SNHG1-222ENST00000545308 KRTDAPP60985 99 aa1.09□□□□□ -2.23
SNHG1-222ENST00000545308 ACYP2P14621 99 aa1.08□□□□□ -2.24
SNHG1-222ENST00000545308 HSD52Q0P140 79 aa1.08□□□□□ -2.24
SNHG1-222ENST00000545308 COL5A1-AS1Q5SY13 56 aa1.08□□□□□ -2.24
SNHG1-222ENST00000545308 PRO1854Q9UHT4 67 aa1.08□□□□□ -2.24
SNHG1-222ENST00000545308 MT1GP13640 62 aa1.07□□□□□ -2.24
SNHG1-222ENST00000545308 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
SNHG1-222ENST00000545308 MMP24-AS1A0A0U1RRL7 71 aa1.06□□□□□ -2.24
SNHG1-222ENST00000545308 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
SNHG1-222ENST00000545308 PRR15LQ9BU68 103 aa1.06□□□□□ -2.24
SNHG1-222ENST00000545308 TP53AIP1Q9HCN2 124 aa1.06□□□□□ -2.24
SNHG1-222ENST00000545308 MT-ATP8P03928 68 aa1.05□□□□□ -2.24
SNHG1-222ENST00000545308 ACYP1P07311 99 aa1.05□□□□□ -2.24
SNHG1-222ENST00000545308 GTF2H5Q6ZYL4 71 aa1.05□□□□□ -2.24
SNHG1-222ENST00000545308 M0QZ58 72 aa1.04□□□□□ -2.24
SNHG1-222ENST00000545308 HIGD1BQ9P298 99 aa1.04□□□□□ -2.24
SNHG1-222ENST00000545308 COX8AP10176 69 aa1.03□□□□□ -2.24
SNHG1-222ENST00000545308 VAMP8Q9BV40 100 aa1.03□□□□□ -2.24
SNHG1-222ENST00000545308 K7EP34 96 aa1.02□□□□□ -2.25
SNHG1-222ENST00000545308 TRAV22A0A0B4J277 110 aa1.01□□□□□ -2.25
SNHG1-222ENST00000545308 ATXN8Q156A1 80 aa1.01□□□□□ -2.25
SNHG1-222ENST00000545308 CYP4F30PQ9H0H9 118 aa1.01□□□□□ -2.25
SNHG1-222ENST00000545308 MT1EP04732 61 aa1□□□□□ -2.25
SNHG1-222ENST00000545308 ATP5EP56381 51 aaPredicted RBP1□□□□□ -2.25
SNHG1-222ENST00000545308 A0A087WVE0 104 aa0.99□□□□□ -2.25
SNHG1-222ENST00000545308 KRTAP20-2Q3LI61 65 aa0.99□□□□□ -2.25
SNHG1-222ENST00000545308 SPATA8Q6RVD6 105 aa0.99□□□□□ -2.25
SNHG1-222ENST00000545308 UQCR10Q9UDW1 63 aa0.99□□□□□ -2.25
SNHG1-222ENST00000545308 ATOX1O00244 68 aa0.98□□□□□ -2.25
SNHG1-222ENST00000545308 KRTAP19-7Q3SYF9 63 aa0.98□□□□□ -2.25
SNHG1-222ENST00000545308 UBL5Q9BZL1 73 aa0.98□□□□□ -2.25
SNHG1-222ENST00000545308 A0A0D9SG42 100 aa0.97□□□□□ -2.25
SNHG1-222ENST00000545308 ETDBQ3ZM63 59 aa0.97□□□□□ -2.25
SNHG1-222ENST00000545308 MT1MQ8N339 61 aa0.97□□□□□ -2.25
SNHG1-222ENST00000545308 SPCS1Q9Y6A9 102 aa0.97□□□□□ -2.25
SNHG1-222ENST00000545308 C10orf95Q9H7T3 257 aa0.94□□□□□ -2.26
SNHG1-222ENST00000545308 H7BZZ5 65 aa0.93□□□□□ -2.26
SNHG1-222ENST00000545308 KRTAP19-5Q3LI72 72 aa0.93□□□□□ -2.26
SNHG1-222ENST00000545308 MT1LQ93083 61 aa0.93□□□□□ -2.26
SNHG1-222ENST00000545308 SERP2Q8N6R1 65 aa0.92□□□□□ -2.26
SNHG1-222ENST00000545308 MUC5BQ9HC84 5762 aaPredicted RBP0.92□□□□□ -2.26
SNHG1-222ENST00000545308 AHNAKQ09666 5890 aaKnown RBP0.91□□□□□ -2.26
SNHG1-222ENST00000545308 H0Y9P7 68 aa0.91□□□□□ -2.26
SNHG1-222ENST00000545308 CHKB-CPT1BH3BT56 60 aa0.91□□□□□ -2.26
SNHG1-222ENST00000545308 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
SNHG1-222ENST00000545308 MUC5ACP98088 5654 aa0.9□□□□□ -2.27
SNHG1-222ENST00000545308 UQCR11O14957 56 aa0.88□□□□□ -2.27
SNHG1-222ENST00000545308 TNP1P09430 55 aa0.88□□□□□ -2.27
SNHG1-222ENST00000545308 LINC00643Q86TS7 51 aa0.88□□□□□ -2.27
SNHG1-222ENST00000545308 ATP5EP2Q5VTU8 51 aa0.83□□□□□ -2.28
SNHG1-222ENST00000545308 MT1AP04731 61 aa0.81□□□□□ -2.28
SNHG1-222ENST00000545308 LINC01558Q9Y6Z2 57 aa0.81□□□□□ -2.28
SNHG1-222ENST00000545308 KRTAP6-2Q3LI66 62 aa0.79□□□□□ -2.28
SNHG1-222ENST00000545308 KRTAP6-1Q3LI64 71 aa0.78□□□□□ -2.28
SNHG1-222ENST00000545308 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
SNHG1-222ENST00000545308 A0A1B0GU69 56 aa0.7□□□□□ -2.3
SNHG1-222ENST00000545308 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
SNHG1-222ENST00000545308 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
SNHG1-222ENST00000545308 PRM1P04553 51 aa0.38□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 16 ms