RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 CSMD2Q7Z408 3487 aa-0.26□□□□□ -2.45
COPA-206ENST00000545266 PRUNE2Q8WUY3 3088 aa-0.26□□□□□ -2.45
COPA-206ENST00000545266 MT1GP13640 62 aa-0.27□□□□□ -2.45
COPA-206ENST00000545266 PRCDQ00LT1 54 aa-0.27□□□□□ -2.45
COPA-206ENST00000545266 DMDP11532 3685 aa-0.27□□□□□ -2.45
COPA-206ENST00000545266 RNF213Q63HN8 5207 aa-0.27□□□□□ -2.45
COPA-206ENST00000545266 RYR3Q15413 4870 aa-0.29□□□□□ -2.46
COPA-206ENST00000545266 MT1MQ8N339 61 aa-0.29□□□□□ -2.46
COPA-206ENST00000545266 CEP250Q9BV73 2442 aa-0.29□□□□□ -2.46
COPA-206ENST00000545266 RYR2Q92736 4967 aa-0.29□□□□□ -2.46
COPA-206ENST00000545266 MYO9AB2RTY4 2548 aa-0.3□□□□□ -2.46
COPA-206ENST00000545266 FRYLO94915 3013 aa-0.3□□□□□ -2.46
COPA-206ENST00000545266 DEFB4AO15263 64 aa-0.3□□□□□ -2.46
COPA-206ENST00000545266 TTTY10Q9BZA0 68 aa-0.3□□□□□ -2.46
COPA-206ENST00000545266 MYO15AQ9UKN7 3530 aa-0.3□□□□□ -2.46
COPA-206ENST00000545266 HERC2O95714 4834 aa-0.3□□□□□ -2.46
COPA-206ENST00000545266 MT2AP02795 61 aa-0.31□□□□□ -2.46
COPA-206ENST00000545266 RHPN1-AS1Q9BWJ2 59 aa-0.31□□□□□ -2.46
COPA-206ENST00000545266 TLN1Q9Y490 2541 aaKnown RBP-0.31□□□□□ -2.46
COPA-206ENST00000545266 ITPR2Q14571 2701 aa-0.32□□□□□ -2.46
COPA-206ENST00000545266 A0A096LNI7 61 aa-0.32□□□□□ -2.46
COPA-206ENST00000545266 MT1HL1P0DM35 61 aa-0.32□□□□□ -2.46
COPA-206ENST00000545266 EPPK1P58107 5090 aaKnown RBP-0.32□□□□□ -2.46
COPA-206ENST00000545266 BIRC6Q9NR09 4857 aa-0.32□□□□□ -2.46
COPA-206ENST00000545266 H3BSH0 61 aa-0.33□□□□□ -2.46
COPA-206ENST00000545266 MKI67P46013 3256 aaKnown RBP-0.33□□□□□ -2.46
COPA-206ENST00000545266 KIAA1109Q2LD37 5005 aa-0.34□□□□□ -2.46
COPA-206ENST00000545266 KRTAP19-6Q3LI70 58 aa-0.34□□□□□ -2.46
COPA-206ENST00000545266 SZT2Q5T011 3432 aa-0.34□□□□□ -2.46
COPA-206ENST00000545266 HYDINQ4G0P3 5121 aa-0.35□□□□□ -2.46
COPA-206ENST00000545266 CEP350Q5VT06 3117 aa-0.35□□□□□ -2.46
COPA-206ENST00000545266 PCNTO95613 3336 aa-0.35□□□□□ -2.47
COPA-206ENST00000545266 ABCA13Q86UQ4 5058 aa-0.35□□□□□ -2.47
COPA-206ENST00000545266 DEFB124Q8NES8 71 aa-0.35□□□□□ -2.47
COPA-206ENST00000545266 TMEM167AQ8TBQ9 72 aa-0.35□□□□□ -2.47
COPA-206ENST00000545266 NIPBLQ6KC79 2804 aaeCLIP-0.35□□□□□ -2.47
COPA-206ENST00000545266 FREM2Q5SZK8 3169 aa-0.37□□□□□ -2.47
COPA-206ENST00000545266 MUC3AQ02505 3323 aa-0.37□□□□□ -2.47
COPA-206ENST00000545266 H3BUX3 64 aa-0.37□□□□□ -2.47
COPA-206ENST00000545266 WDFY4Q6ZS81 3184 aa-0.39□□□□□ -2.47
COPA-206ENST00000545266 BOD1L1Q8NFC6 3051 aa-0.39□□□□□ -2.47
COPA-206ENST00000545266 DCHS1Q96JQ0 3298 aa-0.39□□□□□ -2.47
COPA-206ENST00000545266 DEFB133Q30KQ1 61 aa-0.39□□□□□ -2.47
COPA-206ENST00000545266 MT1BP07438 61 aa-0.4□□□□□ -2.47
COPA-206ENST00000545266 RPS29P62273 56 aaKnown RBP-0.4□□□□□ -2.47
COPA-206ENST00000545266 RPL39P5Q59GN2 51 aa-0.4□□□□□ -2.47
COPA-206ENST00000545266 XIRP2A4UGR9 3374 aa-0.4□□□□□ -2.47
COPA-206ENST00000545266 CEP295Q9C0D2 2601 aa-0.41□□□□□ -2.48
COPA-206ENST00000545266 HTN1P15515 57 aa-0.43□□□□□ -2.48
COPA-206ENST00000545266 DEFB108AA8MXU0 73 aa-0.44□□□□□ -2.48
COPA-206ENST00000545266 MT1FP04733 61 aa-0.45□□□□□ -2.48
COPA-206ENST00000545266 WDFY3Q8IZQ1 3526 aa-0.46□□□□□ -2.48
COPA-206ENST00000545266 LOC400499M0QZD8 3231 aa-0.46□□□□□ -2.48
COPA-206ENST00000545266 KRTAP19-2Q3LHN2 52 aa-0.46□□□□□ -2.48
COPA-206ENST00000545266 EP400Q96L91 3159 aa-0.47□□□□□ -2.48
COPA-206ENST00000545266 UNC80Q8N2C7 3258 aa-0.47□□□□□ -2.48
COPA-206ENST00000545266 SPEGQ15772 3267 aa-0.47□□□□□ -2.49
COPA-206ENST00000545266 APELAP0DMC3 54 aa-0.5□□□□□ -2.49
COPA-206ENST00000545266 CFAP47Q6ZTR5 3102 aa-0.5□□□□□ -2.49
COPA-206ENST00000545266 ASPMQ8IZT6 3477 aa-0.51□□□□□ -2.49
COPA-206ENST00000545266 CD52P31358 61 aa-0.51□□□□□ -2.49
COPA-206ENST00000545266 CENPEQ02224 2701 aa-0.51□□□□□ -2.49
COPA-206ENST00000545266 LINC01556Q5JQF7 62 aa-0.52□□□□□ -2.49
COPA-206ENST00000545266 USP34Q70CQ2 3546 aa-0.53□□□□□ -2.49
COPA-206ENST00000545266 A0A096LPF7 62 aa-0.53□□□□□ -2.49
COPA-206ENST00000545266 VCANP13611 3396 aa-0.57□□□□□ -2.5
COPA-206ENST00000545266 BRCA2P51587 3418 aa-0.57□□□□□ -2.5
COPA-206ENST00000545266 DNAH14Q0VDD8 3507 aa-0.64□□□□□ -2.51
COPA-206ENST00000545266 VPS13AQ96RL7 3174 aa-0.64□□□□□ -2.51
COPA-206ENST00000545266 CENPFP49454 3210 aa-0.66□□□□□ -2.51
COPA-206ENST00000545266 UTRNP46939 3433 aa-0.66□□□□□ -2.51
COPA-206ENST00000545266 Q9Y3F1 56 aa-0.66□□□□□ -2.52
COPA-206ENST00000545266 DEFB108BQ8NET1 73 aa-0.68□□□□□ -2.52
COPA-206ENST00000545266 GOLGB1Q14789 3259 aaKnown RBP-0.69□□□□□ -2.52
COPA-206ENST00000545266 HTN3P15516 51 aa-0.71□□□□□ -2.52
COPA-206ENST00000545266 CDH23Q9H251 3354 aa-0.71□□□□□ -2.52
COPA-206ENST00000545266 STATHP02808 62 aa-0.73□□□□□ -2.53
COPA-206ENST00000545266 COX14Q96I36 57 aa-0.76□□□□□ -2.53
Retrieved 78 of 20,778 RNA–protein pairs in 132.6 ms