RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 CRIPTQ9P021 101 aa4.15□□□□□ -1.75
CHFR-220ENST00000541817 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
CHFR-220ENST00000541817 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
CHFR-220ENST00000541817 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
CHFR-220ENST00000541817 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
CHFR-220ENST00000541817 MT1XP80297 61 aa4.06□□□□□ -1.76
CHFR-220ENST00000541817 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.76
CHFR-220ENST00000541817 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.76
CHFR-220ENST00000541817 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
CHFR-220ENST00000541817 MT4P47944 62 aa4.01□□□□□ -1.77
CHFR-220ENST00000541817 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
CHFR-220ENST00000541817 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
CHFR-220ENST00000541817 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
CHFR-220ENST00000541817 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
CHFR-220ENST00000541817 CAMK2N1Q7Z7J9 78 aa3.96□□□□□ -1.78
CHFR-220ENST00000541817 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
CHFR-220ENST00000541817 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
CHFR-220ENST00000541817 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
CHFR-220ENST00000541817 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
CHFR-220ENST00000541817 PLAC4Q8WY50 150 aa3.84□□□□□ -1.79
CHFR-220ENST00000541817 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
CHFR-220ENST00000541817 TNP1P09430 55 aa3.82□□□□□ -1.8
CHFR-220ENST00000541817 KRTAP4-6Q9BYQ5 205 aa3.81□□□□□ -1.8
CHFR-220ENST00000541817 KRTAP10-12P60413 245 aa3.8□□□□□ -1.8
CHFR-220ENST00000541817 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
CHFR-220ENST00000541817 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
CHFR-220ENST00000541817 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
CHFR-220ENST00000541817 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
CHFR-220ENST00000541817 MT1EP04732 61 aa3.63□□□□□ -1.83
CHFR-220ENST00000541817 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
CHFR-220ENST00000541817 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
CHFR-220ENST00000541817 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
CHFR-220ENST00000541817 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
CHFR-220ENST00000541817 MT1GP13640 62 aa3.52□□□□□ -1.85
CHFR-220ENST00000541817 MT1MQ8N339 61 aa3.5□□□□□ -1.85
CHFR-220ENST00000541817 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
CHFR-220ENST00000541817 KRTAP4-7Q9BYR0 210 aa3.44□□□□□ -1.86
CHFR-220ENST00000541817 INE1O15225 51 aa3.43□□□□□ -1.86
CHFR-220ENST00000541817 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
CHFR-220ENST00000541817 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
CHFR-220ENST00000541817 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
CHFR-220ENST00000541817 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
CHFR-220ENST00000541817 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
CHFR-220ENST00000541817 MT1LQ93083 61 aa3.36□□□□□ -1.87
CHFR-220ENST00000541817 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
CHFR-220ENST00000541817 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
CHFR-220ENST00000541817 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
CHFR-220ENST00000541817 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
CHFR-220ENST00000541817 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
CHFR-220ENST00000541817 KRTAP19-4Q3LI73 84 aa3.2□□□□□ -1.9
CHFR-220ENST00000541817 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
CHFR-220ENST00000541817 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
CHFR-220ENST00000541817 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
CHFR-220ENST00000541817 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
CHFR-220ENST00000541817 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
CHFR-220ENST00000541817 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
CHFR-220ENST00000541817 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
CHFR-220ENST00000541817 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
CHFR-220ENST00000541817 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
CHFR-220ENST00000541817 MT1AP04731 61 aa2.83□□□□□ -1.96
CHFR-220ENST00000541817 MT3P25713 68 aa2.6□□□□□ -1.99
CHFR-220ENST00000541817 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
CHFR-220ENST00000541817 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
CHFR-220ENST00000541817 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
CHFR-220ENST00000541817 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
CHFR-220ENST00000541817 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
CHFR-220ENST00000541817 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
CHFR-220ENST00000541817 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
CHFR-220ENST00000541817 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
CHFR-220ENST00000541817 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
CHFR-220ENST00000541817 PRM1P04553 51 aa2.24□□□□□ -2.05
CHFR-220ENST00000541817 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
CHFR-220ENST00000541817 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
CHFR-220ENST00000541817 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
CHFR-220ENST00000541817 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
CHFR-220ENST00000541817 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
CHFR-220ENST00000541817 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
CHFR-220ENST00000541817 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 29.3 ms