RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 TRRAPQ9Y4A5 3859 aa-0.58□□□□□ -2.5
MDM2-227ENST00000540709 MT1BP07438 61 aa-0.58□□□□□ -2.5
MDM2-227ENST00000540709 DNAH5Q8TE73 4624 aa-0.58□□□□□ -2.5
MDM2-227ENST00000540709 IQGAP2Q13576 1575 aa-0.58□□□□□ -2.5
MDM2-227ENST00000540709 ITPR2Q14571 2701 aa-0.58□□□□□ -2.5
MDM2-227ENST00000540709 A0A096LNI7 61 aa-0.59□□□□□ -2.5
MDM2-227ENST00000540709 TLN1Q9Y490 2541 aaKnown RBP-0.59□□□□□ -2.5
MDM2-227ENST00000540709 MYO15AQ9UKN7 3530 aa-0.61□□□□□ -2.51
MDM2-227ENST00000540709 CFAP54Q96N23 3096 aa-0.61□□□□□ -2.51
MDM2-227ENST00000540709 RPL39LQ96EH5 51 aaKnown RBP-0.61□□□□□ -2.51
MDM2-227ENST00000540709 PRUNE2Q8WUY3 3088 aa-0.61□□□□□ -2.51
MDM2-227ENST00000540709 SAMD9LQ8IVG5 1584 aa-0.62□□□□□ -2.51
MDM2-227ENST00000540709 HTN1P15515 57 aa-0.62□□□□□ -2.51
MDM2-227ENST00000540709 DEFB133Q30KQ1 61 aa-0.62□□□□□ -2.51
MDM2-227ENST00000540709 ATMQ13315 3056 aa-0.62□□□□□ -2.51
MDM2-227ENST00000540709 DUOX1Q9NRD9 1551 aa-0.64□□□□□ -2.51
MDM2-227ENST00000540709 TTTY10Q9BZA0 68 aa-0.64□□□□□ -2.51
MDM2-227ENST00000540709 FREM2Q5SZK8 3169 aa-0.64□□□□□ -2.51
MDM2-227ENST00000540709 DEFB104AQ8WTQ1 72 aa-0.65□□□□□ -2.51
MDM2-227ENST00000540709 VPS13CQ709C8 3753 aa-0.66□□□□□ -2.51
MDM2-227ENST00000540709 ATP7AQ04656 1500 aa-0.66□□□□□ -2.52
MDM2-227ENST00000540709 CD52P31358 61 aa-0.67□□□□□ -2.52
MDM2-227ENST00000540709 MT1FP04733 61 aa-0.68□□□□□ -2.52
MDM2-227ENST00000540709 FRYLO94915 3013 aa-0.69□□□□□ -2.52
MDM2-227ENST00000540709 CEP250Q9BV73 2442 aa-0.69□□□□□ -2.52
MDM2-227ENST00000540709 PCNTO95613 3336 aa-0.69□□□□□ -2.52
MDM2-227ENST00000540709 TOP2AP11388 1531 aaKnown RBP-0.7□□□□□ -2.52
MDM2-227ENST00000540709 CEP350Q5VT06 3117 aa-0.71□□□□□ -2.52
MDM2-227ENST00000540709 MROH2BQ7Z745 1585 aa-0.71□□□□□ -2.52
MDM2-227ENST00000540709 DMDP11532 3685 aa-0.72□□□□□ -2.52
MDM2-227ENST00000540709 WDFY3Q8IZQ1 3526 aa-0.73□□□□□ -2.53
MDM2-227ENST00000540709 DEFB124Q8NES8 71 aa-0.73□□□□□ -2.53
MDM2-227ENST00000540709 ABCA13Q86UQ4 5058 aa-0.73□□□□□ -2.53
MDM2-227ENST00000540709 SZT2Q5T011 3432 aa-0.74□□□□□ -2.53
MDM2-227ENST00000540709 BOD1L1Q8NFC6 3051 aa-0.74□□□□□ -2.53
MDM2-227ENST00000540709 KRTAP20-1Q3LI63 56 aa-0.74□□□□□ -2.53
MDM2-227ENST00000540709 WDFY4Q6ZS81 3184 aa-0.75□□□□□ -2.53
MDM2-227ENST00000540709 SPEGQ15772 3267 aa-0.76□□□□□ -2.53
MDM2-227ENST00000540709 H3BUX3 64 aa-0.76□□□□□ -2.53
MDM2-227ENST00000540709 SNRPGP62308 76 aaKnown RBP-0.77□□□□□ -2.53
MDM2-227ENST00000540709 DNAH12Q6ZR08 3092 aa-0.78□□□□□ -2.53
MDM2-227ENST00000540709 K7EIM0 57 aa-0.78□□□□□ -2.53
MDM2-227ENST00000540709 ARHGAP5-AS1Q96IT6 56 aa-0.78□□□□□ -2.53
MDM2-227ENST00000540709 XIRP2A4UGR9 3374 aa-0.79□□□□□ -2.54
MDM2-227ENST00000540709 MUC3AQ02505 3323 aa-0.79□□□□□ -2.54
MDM2-227ENST00000540709 MKI67P46013 3256 aaKnown RBP-0.81□□□□□ -2.54
MDM2-227ENST00000540709 EP400Q96L91 3159 aa-0.82□□□□□ -2.54
MDM2-227ENST00000540709 LINC01556Q5JQF7 62 aa-0.82□□□□□ -2.54
MDM2-227ENST00000540709 PRCDQ00LT1 54 aa-0.83□□□□□ -2.54
MDM2-227ENST00000540709 DCHS1Q96JQ0 3298 aa-0.83□□□□□ -2.54
MDM2-227ENST00000540709 CENPEQ02224 2701 aa-0.84□□□□□ -2.54
MDM2-227ENST00000540709 KRTAP19-6Q3LI70 58 aa-0.85□□□□□ -2.55
MDM2-227ENST00000540709 GCC2Q8IWJ2 1684 aa-0.85□□□□□ -2.55
MDM2-227ENST00000540709 LOC400499M0QZD8 3231 aa-0.86□□□□□ -2.55
MDM2-227ENST00000540709 UNC80Q8N2C7 3258 aa-0.88□□□□□ -2.55
MDM2-227ENST00000540709 APELAP0DMC3 54 aa-0.88□□□□□ -2.55
MDM2-227ENST00000540709 USP34Q70CQ2 3546 aa-0.88□□□□□ -2.55
MDM2-227ENST00000540709 A0A096LPF7 62 aa-0.89□□□□□ -2.55
MDM2-227ENST00000540709 TMEM167AQ8TBQ9 72 aa-0.89□□□□□ -2.55
MDM2-227ENST00000540709 ASPMQ8IZT6 3477 aa-0.9□□□□□ -2.55
MDM2-227ENST00000540709 H3BSH0 61 aa-0.9□□□□□ -2.55
MDM2-227ENST00000540709 CFAP47Q6ZTR5 3102 aa-0.91□□□□□ -2.56
MDM2-227ENST00000540709 DNAH14Q0VDD8 3507 aa-0.92□□□□□ -2.56
MDM2-227ENST00000540709 KRTAP19-2Q3LHN2 52 aa-0.93□□□□□ -2.56
MDM2-227ENST00000540709 BRCA2P51587 3418 aa-0.93□□□□□ -2.56
MDM2-227ENST00000540709 RPL39P5Q59GN2 51 aa-0.95□□□□□ -2.56
MDM2-227ENST00000540709 DEFB108AA8MXU0 73 aa-0.96□□□□□ -2.56
MDM2-227ENST00000540709 CENPFP49454 3210 aa-0.98□□□□□ -2.57
MDM2-227ENST00000540709 HTN3P15516 51 aa-0.99□□□□□ -2.57
MDM2-227ENST00000540709 VCANP13611 3396 aa-1.01□□□□□ -2.57
MDM2-227ENST00000540709 Q9Y3F1 56 aa-1.04□□□□□ -2.58
MDM2-227ENST00000540709 CDH23Q9H251 3354 aa-1.05□□□□□ -2.58
MDM2-227ENST00000540709 VPS13AQ96RL7 3174 aa-1.1□□□□□ -2.59
MDM2-227ENST00000540709 DEFB108BQ8NET1 73 aa-1.14□□□□□ -2.59
MDM2-227ENST00000540709 UTRNP46939 3433 aa-1.15□□□□□ -2.59
MDM2-227ENST00000540709 COX14Q96I36 57 aa-1.17□□□□□ -2.6
MDM2-227ENST00000540709 GOLGB1Q14789 3259 aaKnown RBP-1.23□□□□□ -2.61
MDM2-227ENST00000540709 STATHP02808 62 aa-1.33□□□□□ -2.62
Retrieved 78 of 20,778 RNA–protein pairs in 761.2 ms