RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 K7ERS5 55 aa3.82□□□□□ -1.8
RTN4IP1-204ENST00000539449 MT1XP80297 61 aa3.82□□□□□ -1.8
RTN4IP1-204ENST00000539449 CAMK2N1Q7Z7J9 78 aa3.82□□□□□ -1.8
RTN4IP1-204ENST00000539449 PRO0628Q9UI54 55 aa3.82□□□□□ -1.8
RTN4IP1-204ENST00000539449 KRTAP10-5P60370 271 aa3.81□□□□□ -1.8
RTN4IP1-204ENST00000539449 C10orf95Q9H7T3 257 aa3.8□□□□□ -1.8
RTN4IP1-204ENST00000539449 SPRR2EP22531 72 aa3.78□□□□□ -1.8
RTN4IP1-204ENST00000539449 SPRR2BP35325 72 aa3.78□□□□□ -1.8
RTN4IP1-204ENST00000539449 SPRR2AP35326 72 aa3.78□□□□□ -1.8
RTN4IP1-204ENST00000539449 PMAIP1Q13794 54 aa3.75□□□□□ -1.81
RTN4IP1-204ENST00000539449 ROMO1P60602 79 aa3.72□□□□□ -1.81
RTN4IP1-204ENST00000539449 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
RTN4IP1-204ENST00000539449 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
RTN4IP1-204ENST00000539449 PRO2289Q9P1D8 64 aa3.68□□□□□ -1.82
RTN4IP1-204ENST00000539449 SPRR2DP22532 72 aa3.66□□□□□ -1.82
RTN4IP1-204ENST00000539449 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
RTN4IP1-204ENST00000539449 TNP1P09430 55 aa3.62□□□□□ -1.83
RTN4IP1-204ENST00000539449 DSTQ03001 7570 aaKnown RBP3.62□□□□□ -1.83
RTN4IP1-204ENST00000539449 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
RTN4IP1-204ENST00000539449 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
RTN4IP1-204ENST00000539449 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
RTN4IP1-204ENST00000539449 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
RTN4IP1-204ENST00000539449 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
RTN4IP1-204ENST00000539449 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
RTN4IP1-204ENST00000539449 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
RTN4IP1-204ENST00000539449 AHNAK2Q8IVF2 5795 aa3.51□□□□□ -1.85
RTN4IP1-204ENST00000539449 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
RTN4IP1-204ENST00000539449 KRTAP8-1Q8IUC2 63 aa3.48□□□□□ -1.85
RTN4IP1-204ENST00000539449 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
RTN4IP1-204ENST00000539449 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
RTN4IP1-204ENST00000539449 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
RTN4IP1-204ENST00000539449 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
RTN4IP1-204ENST00000539449 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
RTN4IP1-204ENST00000539449 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
RTN4IP1-204ENST00000539449 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
RTN4IP1-204ENST00000539449 MT1EP04732 61 aa3.35□□□□□ -1.87
RTN4IP1-204ENST00000539449 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
RTN4IP1-204ENST00000539449 MT1LQ93083 61 aa3.27□□□□□ -1.89
RTN4IP1-204ENST00000539449 MT4P47944 62 aa3.26□□□□□ -1.89
RTN4IP1-204ENST00000539449 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
RTN4IP1-204ENST00000539449 KRTAP19-3Q7Z4W3 81 aa3.22□□□□□ -1.89
RTN4IP1-204ENST00000539449 MT1GP13640 62 aa3.17□□□□□ -1.9
RTN4IP1-204ENST00000539449 MT1MQ8N339 61 aa3.17□□□□□ -1.9
RTN4IP1-204ENST00000539449 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
RTN4IP1-204ENST00000539449 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
RTN4IP1-204ENST00000539449 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
RTN4IP1-204ENST00000539449 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
RTN4IP1-204ENST00000539449 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
RTN4IP1-204ENST00000539449 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
RTN4IP1-204ENST00000539449 MUC5ACP98088 5654 aa3□□□□□ -1.93
RTN4IP1-204ENST00000539449 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
RTN4IP1-204ENST00000539449 MT3P25713 68 aa2.98□□□□□ -1.93
RTN4IP1-204ENST00000539449 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
RTN4IP1-204ENST00000539449 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
RTN4IP1-204ENST00000539449 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
RTN4IP1-204ENST00000539449 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
RTN4IP1-204ENST00000539449 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
RTN4IP1-204ENST00000539449 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
RTN4IP1-204ENST00000539449 MT1AP04731 61 aa2.77□□□□□ -1.97
RTN4IP1-204ENST00000539449 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
RTN4IP1-204ENST00000539449 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
RTN4IP1-204ENST00000539449 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
RTN4IP1-204ENST00000539449 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
RTN4IP1-204ENST00000539449 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
RTN4IP1-204ENST00000539449 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
RTN4IP1-204ENST00000539449 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
RTN4IP1-204ENST00000539449 INE1O15225 51 aa2.42□□□□□ -2.02
RTN4IP1-204ENST00000539449 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
RTN4IP1-204ENST00000539449 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
RTN4IP1-204ENST00000539449 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
RTN4IP1-204ENST00000539449 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
RTN4IP1-204ENST00000539449 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
RTN4IP1-204ENST00000539449 PRM1P04553 51 aa1.96□□□□□ -2.1
RTN4IP1-204ENST00000539449 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
RTN4IP1-204ENST00000539449 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
RTN4IP1-204ENST00000539449 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
RTN4IP1-204ENST00000539449 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 43.6 ms