RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 UQCR11O14957 56 aa6.47□□□□□ -1.37
GPN3-202ENST00000537466 BRK1Q8WUW1 75 aa6.46□□□□□ -1.38
GPN3-202ENST00000537466 MT1EP04732 61 aa6.44□□□□□ -1.38
GPN3-202ENST00000537466 KRTAP2-2Q9BYT5 123 aa6.43□□□□□ -1.38
GPN3-202ENST00000537466 KRTAP2-1Q9BYU5 128 aa6.43□□□□□ -1.38
GPN3-202ENST00000537466 C10orf95Q9H7T3 257 aa6.43□□□□□ -1.38
GPN3-202ENST00000537466 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
GPN3-202ENST00000537466 MIR22HGQ0VDD5 57 aa6.38□□□□□ -1.39
GPN3-202ENST00000537466 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
GPN3-202ENST00000537466 LCE5AQ5TCM9 118 aa6.35□□□□□ -1.39
GPN3-202ENST00000537466 PRO0628Q9UI54 55 aa6.35□□□□□ -1.39
GPN3-202ENST00000537466 KRTAP19-3Q7Z4W3 81 aa6.34□□□□□ -1.39
GPN3-202ENST00000537466 TNP1P09430 55 aa6.34□□□□□ -1.4
GPN3-202ENST00000537466 LCE3AQ5TA76 89 aa6.3□□□□□ -1.4
GPN3-202ENST00000537466 DSTQ03001 7570 aaKnown RBP6.22□□□□□ -1.41
GPN3-202ENST00000537466 K7ERS5 55 aa6.22□□□□□ -1.41
GPN3-202ENST00000537466 MT1GP13640 62 aa6.2□□□□□ -1.42
GPN3-202ENST00000537466 MT1LQ93083 61 aa6.18□□□□□ -1.42
GPN3-202ENST00000537466 PMAIP1Q13794 54 aa6.12□□□□□ -1.43
GPN3-202ENST00000537466 PP632Q6XCG6 107 aa6.12□□□□□ -1.43
GPN3-202ENST00000537466 MT1MQ8N339 61 aa6.12□□□□□ -1.43
GPN3-202ENST00000537466 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
GPN3-202ENST00000537466 KRTAP25-1Q3LHN0 102 aa6.04□□□□□ -1.44
GPN3-202ENST00000537466 KRTAP4-3Q9BYR4 195 aa6.01□□□□□ -1.45
GPN3-202ENST00000537466 LCE4AQ5TA78 99 aa5.98□□□□□ -1.45
GPN3-202ENST00000537466 KTN1-AS1Q86SY8 53 aa5.89□□□□□ -1.47
GPN3-202ENST00000537466 SVIPQ8NHG7 77 aa5.87□□□□□ -1.47
GPN3-202ENST00000537466 ROMO1P60602 79 aa5.84□□□□□ -1.47
GPN3-202ENST00000537466 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
GPN3-202ENST00000537466 MT4P47944 62 aa5.76□□□□□ -1.49
GPN3-202ENST00000537466 KRTAP5-4Q6L8H1 288 aa5.75□□□□□ -1.49
GPN3-202ENST00000537466 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
GPN3-202ENST00000537466 HMCN1Q96RW7 5635 aa5.66□□□□□ -1.5
GPN3-202ENST00000537466 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
GPN3-202ENST00000537466 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
GPN3-202ENST00000537466 KRTAP5-5Q701N2 237 aaPredicted RBP5.6□□□□□ -1.51
GPN3-202ENST00000537466 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
GPN3-202ENST00000537466 GPR98Q8WXG9 6306 aa5.56□□□□□ -1.52
GPN3-202ENST00000537466 KRTAP20-2Q3LI61 65 aa5.42□□□□□ -1.54
GPN3-202ENST00000537466 AHNAK2Q8IVF2 5795 aa5.4□□□□□ -1.55
GPN3-202ENST00000537466 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
GPN3-202ENST00000537466 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
GPN3-202ENST00000537466 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
GPN3-202ENST00000537466 KRTAP9-6A8MVA2 160 aa5.31□□□□□ -1.56
GPN3-202ENST00000537466 KRTAP5-10Q6L8G5 202 aa5.31□□□□□ -1.56
GPN3-202ENST00000537466 H3BS24 57 aa5.28□□□□□ -1.56
GPN3-202ENST00000537466 MT1AP04731 61 aa5.25□□□□□ -1.57
GPN3-202ENST00000537466 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
GPN3-202ENST00000537466 KRTAP5-7Q6L8G8 165 aa5.07□□□□□ -1.6
GPN3-202ENST00000537466 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
GPN3-202ENST00000537466 KRTAP5-6Q6L8G9 129 aaPredicted RBP5□□□□□ -1.61
GPN3-202ENST00000537466 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
GPN3-202ENST00000537466 MT3P25713 68 aa4.77□□□□□ -1.65
GPN3-202ENST00000537466 LUZP6Q538Z0 58 aa4.77□□□□□ -1.65
GPN3-202ENST00000537466 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
GPN3-202ENST00000537466 KRTAP5-8O75690 187 aa4.75□□□□□ -1.65
GPN3-202ENST00000537466 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
GPN3-202ENST00000537466 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
GPN3-202ENST00000537466 KRTAP5-11Q6L8G4 156 aa4.48□□□□□ -1.69
GPN3-202ENST00000537466 MUC5BQ9HC84 5762 aaPredicted RBP4.4□□□□□ -1.7
GPN3-202ENST00000537466 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
GPN3-202ENST00000537466 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
GPN3-202ENST00000537466 AHNAKQ09666 5890 aaKnown RBP4.34□□□□□ -1.71
GPN3-202ENST00000537466 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
GPN3-202ENST00000537466 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
GPN3-202ENST00000537466 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
GPN3-202ENST00000537466 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
GPN3-202ENST00000537466 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
GPN3-202ENST00000537466 INE1O15225 51 aa3.86□□□□□ -1.79
GPN3-202ENST00000537466 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
GPN3-202ENST00000537466 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
GPN3-202ENST00000537466 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
GPN3-202ENST00000537466 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
GPN3-202ENST00000537466 PRM1P04553 51 aa3.01□□□□□ -1.93
GPN3-202ENST00000537466 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
GPN3-202ENST00000537466 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
GPN3-202ENST00000537466 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 95 ms