RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-215ENST00000537296 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
LDHA-215ENST00000537296 MT3P25713 68 aa4.48□□□□□ -1.69
LDHA-215ENST00000537296 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
LDHA-215ENST00000537296 KRTAP5-9P26371 169 aa4.46□□□□□ -1.69
LDHA-215ENST00000537296 A0A0D9SG42 100 aa4.46□□□□□ -1.7
LDHA-215ENST00000537296 MDN1Q9NU22 5596 aa4.42□□□□□ -1.7
LDHA-215ENST00000537296 KRTAP12-1P59990 96 aa4.4□□□□□ -1.71
LDHA-215ENST00000537296 KRTAP12-2P59991 146 aa4.39□□□□□ -1.71
LDHA-215ENST00000537296 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
LDHA-215ENST00000537296 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
LDHA-215ENST00000537296 SPRR2FQ96RM1 72 aa4.36□□□□□ -1.71
LDHA-215ENST00000537296 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
LDHA-215ENST00000537296 KRTAP20-1Q3LI63 56 aa4.35□□□□□ -1.71
LDHA-215ENST00000537296 KRTAP10-12P60413 245 aa4.31□□□□□ -1.72
LDHA-215ENST00000537296 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
LDHA-215ENST00000537296 SPRR2EP22531 72 aa4.28□□□□□ -1.72
LDHA-215ENST00000537296 SPRR2BP35325 72 aa4.28□□□□□ -1.72
LDHA-215ENST00000537296 SPRR2AP35326 72 aa4.28□□□□□ -1.72
LDHA-215ENST00000537296 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
LDHA-215ENST00000537296 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
LDHA-215ENST00000537296 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
LDHA-215ENST00000537296 NDUFAF8A1L188 74 aa4.16□□□□□ -1.74
LDHA-215ENST00000537296 PP632Q6XCG6 107 aa4.14□□□□□ -1.75
LDHA-215ENST00000537296 SPRR2DP22532 72 aa4.13□□□□□ -1.75
LDHA-215ENST00000537296 KRTAP19-7Q3SYF9 63 aa4.09□□□□□ -1.75
LDHA-215ENST00000537296 MT1EP04732 61 aa4.04□□□□□ -1.76
LDHA-215ENST00000537296 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
LDHA-215ENST00000537296 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
LDHA-215ENST00000537296 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
LDHA-215ENST00000537296 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
LDHA-215ENST00000537296 KRTAP19-3Q7Z4W3 81 aa3.97□□□□□ -1.77
LDHA-215ENST00000537296 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
LDHA-215ENST00000537296 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
LDHA-215ENST00000537296 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
LDHA-215ENST00000537296 TNP1P09430 55 aa3.94□□□□□ -1.78
LDHA-215ENST00000537296 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
LDHA-215ENST00000537296 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
LDHA-215ENST00000537296 MT1GP13640 62 aa3.86□□□□□ -1.79
LDHA-215ENST00000537296 MT1LQ93083 61 aa3.86□□□□□ -1.79
LDHA-215ENST00000537296 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
LDHA-215ENST00000537296 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
LDHA-215ENST00000537296 MT1MQ8N339 61 aa3.84□□□□□ -1.8
LDHA-215ENST00000537296 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
LDHA-215ENST00000537296 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
LDHA-215ENST00000537296 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
LDHA-215ENST00000537296 MT4P47944 62 aa3.64□□□□□ -1.83
LDHA-215ENST00000537296 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
LDHA-215ENST00000537296 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
LDHA-215ENST00000537296 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.84
LDHA-215ENST00000537296 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
LDHA-215ENST00000537296 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
LDHA-215ENST00000537296 INE1O15225 51 aa3.5□□□□□ -1.85
LDHA-215ENST00000537296 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
LDHA-215ENST00000537296 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
LDHA-215ENST00000537296 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.86
LDHA-215ENST00000537296 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
LDHA-215ENST00000537296 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
LDHA-215ENST00000537296 SYNE1Q8NF91 8797 aaKnown RBP3.35□□□□□ -1.87
LDHA-215ENST00000537296 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
LDHA-215ENST00000537296 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
LDHA-215ENST00000537296 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
LDHA-215ENST00000537296 MT1AP04731 61 aa3.28□□□□□ -1.88
LDHA-215ENST00000537296 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
LDHA-215ENST00000537296 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
LDHA-215ENST00000537296 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
LDHA-215ENST00000537296 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
LDHA-215ENST00000537296 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
LDHA-215ENST00000537296 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
LDHA-215ENST00000537296 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
LDHA-215ENST00000537296 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
LDHA-215ENST00000537296 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
LDHA-215ENST00000537296 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
LDHA-215ENST00000537296 PRM1P04553 51 aa2.42□□□□□ -2.02
LDHA-215ENST00000537296 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
LDHA-215ENST00000537296 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
LDHA-215ENST00000537296 PHGR1C9JFL3 82 aa2□□□□□ -2.09
LDHA-215ENST00000537296 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.16
LDHA-215ENST00000537296 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms