RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 MUC12Q9UKN1 5478 aa2.59□□□□□ -2
CHD4-206ENST00000536999 KRTAP9-8Q9BYQ0 159 aa2.57□□□□□ -2
CHD4-206ENST00000536999 PRO2289Q9P1D8 64 aa2.56□□□□□ -2
CHD4-206ENST00000536999 FLGP20930 4061 aaPredicted RBP2.56□□□□□ -2
CHD4-206ENST00000536999 KMT2DO14686 5537 aa2.52□□□□□ -2.01
CHD4-206ENST00000536999 KRTAP2-3P0C7H8 128 aa2.5□□□□□ -2.01
CHD4-206ENST00000536999 KRTAP2-4Q9BYR9 128 aa2.5□□□□□ -2.01
CHD4-206ENST00000536999 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
CHD4-206ENST00000536999 SPRR2GQ9BYE4 73 aa2.48□□□□□ -2.01
CHD4-206ENST00000536999 MDN1Q9NU22 5596 aa2.46□□□□□ -2.02
CHD4-206ENST00000536999 MT2AP02795 61 aa2.43□□□□□ -2.02
CHD4-206ENST00000536999 KRTAP10-10P60014 251 aa2.43□□□□□ -2.02
CHD4-206ENST00000536999 KRTAP8-1Q8IUC2 63 aa2.42□□□□□ -2.02
CHD4-206ENST00000536999 MT1FP04733 61 aa2.41□□□□□ -2.02
CHD4-206ENST00000536999 KRTAP2-2Q9BYT5 123 aa2.39□□□□□ -2.03
CHD4-206ENST00000536999 KRTAP2-1Q9BYU5 128 aa2.39□□□□□ -2.03
CHD4-206ENST00000536999 LCE1AQ5T7P2 110 aa2.38□□□□□ -2.03
CHD4-206ENST00000536999 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
CHD4-206ENST00000536999 KRTAP19-8Q3LI54 63 aa2.34□□□□□ -2.03
CHD4-206ENST00000536999 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
CHD4-206ENST00000536999 LCE3AQ5TA76 89 aa2.33□□□□□ -2.04
CHD4-206ENST00000536999 KRTAP10-12P60413 245 aa2.31□□□□□ -2.04
CHD4-206ENST00000536999 SPRR2EP22531 72 aa2.3□□□□□ -2.04
CHD4-206ENST00000536999 SPRR2BP35325 72 aa2.3□□□□□ -2.04
CHD4-206ENST00000536999 SPRR2AP35326 72 aa2.3□□□□□ -2.04
CHD4-206ENST00000536999 DSTQ03001 7570 aaKnown RBP2.26□□□□□ -2.05
CHD4-206ENST00000536999 SPRR2DP22532 72 aa2.23□□□□□ -2.05
CHD4-206ENST00000536999 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
CHD4-206ENST00000536999 KRTAP10-5P60370 271 aa2.21□□□□□ -2.06
CHD4-206ENST00000536999 LCE3CQ5T5A8 94 aa2.2□□□□□ -2.06
CHD4-206ENST00000536999 MT1XP80297 61 aa2.19□□□□□ -2.06
CHD4-206ENST00000536999 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
CHD4-206ENST00000536999 MT1BP07438 61 aa2.16□□□□□ -2.06
CHD4-206ENST00000536999 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
CHD4-206ENST00000536999 MT3P25713 68 aa2.11□□□□□ -2.07
CHD4-206ENST00000536999 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
CHD4-206ENST00000536999 KRTAP10-7P60409 375 aaPredicted RBP2.1□□□□□ -2.07
CHD4-206ENST00000536999 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
CHD4-206ENST00000536999 KRTAP19-5Q3LI72 72 aa2.08□□□□□ -2.08
CHD4-206ENST00000536999 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
CHD4-206ENST00000536999 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
CHD4-206ENST00000536999 LCE1EQ5T753 118 aa2.01□□□□□ -2.09
CHD4-206ENST00000536999 MT1EP04732 61 aa2□□□□□ -2.09
CHD4-206ENST00000536999 MT4P47944 62 aa1.99□□□□□ -2.09
CHD4-206ENST00000536999 MT1LQ93083 61 aa1.98□□□□□ -2.09
CHD4-206ENST00000536999 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
CHD4-206ENST00000536999 KRTAP19-7Q3SYF9 63 aa1.95□□□□□ -2.1
CHD4-206ENST00000536999 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
CHD4-206ENST00000536999 KRTAP9-6A8MVA2 160 aa1.91□□□□□ -2.1
CHD4-206ENST00000536999 MT1GP13640 62 aa1.9□□□□□ -2.11
CHD4-206ENST00000536999 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
CHD4-206ENST00000536999 MT1AP04731 61 aa1.86□□□□□ -2.11
CHD4-206ENST00000536999 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
CHD4-206ENST00000536999 KRTAP19-3Q7Z4W3 81 aa1.83□□□□□ -2.12
CHD4-206ENST00000536999 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
CHD4-206ENST00000536999 KRTAP5-1Q6L8H4 278 aa1.81□□□□□ -2.12
CHD4-206ENST00000536999 MT1MQ8N339 61 aa1.79□□□□□ -2.12
CHD4-206ENST00000536999 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.12
CHD4-206ENST00000536999 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
CHD4-206ENST00000536999 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
CHD4-206ENST00000536999 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
CHD4-206ENST00000536999 KRTAP20-2Q3LI61 65 aa1.72□□□□□ -2.13
CHD4-206ENST00000536999 OBSCNQ5VST9 7968 aa1.69□□□□□ -2.14
CHD4-206ENST00000536999 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
CHD4-206ENST00000536999 PRM1P04553 51 aa1.61□□□□□ -2.15
CHD4-206ENST00000536999 KRTAP4-3Q9BYR4 195 aa1.61□□□□□ -2.15
CHD4-206ENST00000536999 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.15
CHD4-206ENST00000536999 KRTAP6-1Q3LI64 71 aa1.58□□□□□ -2.16
CHD4-206ENST00000536999 KRTAP5-5Q701N2 237 aaPredicted RBP1.56□□□□□ -2.16
CHD4-206ENST00000536999 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
CHD4-206ENST00000536999 KRTAP6-2Q3LI66 62 aa1.52□□□□□ -2.17
CHD4-206ENST00000536999 LCE1CQ5T751 118 aa1.31□□□□□ -2.2
CHD4-206ENST00000536999 LCE1BQ5T7P3 118 aa1.31□□□□□ -2.2
CHD4-206ENST00000536999 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
CHD4-206ENST00000536999 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
CHD4-206ENST00000536999 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
CHD4-206ENST00000536999 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
CHD4-206ENST00000536999 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 104.4 ms