RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	SMIM11B	Q8TCY0	68 aa		0.82	□□□□□ -2.28
LMO7-223	ENST00000533299		Q96NJ1	140 aa		0.82	□□□□□ -2.28
LMO7-223	ENST00000533299	LIMD2	Q9BT23	127 aa		0.82	□□□□□ -2.28
LMO7-223	ENST00000533299	ORMDL1	Q9P0S3	153 aa		0.82	□□□□□ -2.28
LMO7-223	ENST00000533299	MT1B	P07438	61 aa		0.81	□□□□□ -2.28
LMO7-223	ENST00000533299	SPRR1A	P35321	89 aa		0.81	□□□□□ -2.28
LMO7-223	ENST00000533299	LINC00158	P58513	81 aa		0.81	□□□□□ -2.28
LMO7-223	ENST00000533299	KRTAP5-10	Q6L8G5	202 aa		0.81	□□□□□ -2.28
LMO7-223	ENST00000533299	UBL5	Q9BZL1	73 aa		0.81	□□□□□ -2.28
LMO7-223	ENST00000533299	CHKB-CPT1B	H3BT56	60 aa		0.8	□□□□□ -2.28
LMO7-223	ENST00000533299	MIR22HG	Q0VDD5	57 aa		0.8	□□□□□ -2.28
LMO7-223	ENST00000533299	PRR15L	Q9BU68	103 aa		0.8	□□□□□ -2.28
LMO7-223	ENST00000533299	KCNQ1DN	Q9H478	68 aa		0.8	□□□□□ -2.28
LMO7-223	ENST00000533299	JMJD7-PLA2G4B	H0Y9G9	81 aa		0.8	□□□□□ -2.28
LMO7-223	ENST00000533299		H0YGX0	51 aa		0.8	□□□□□ -2.28
LMO7-223	ENST00000533299	PPP1R17	O96001	155 aa		0.8	□□□□□ -2.28
LMO7-223	ENST00000533299		Q6ZRX8	168 aa		0.8	□□□□□ -2.28
LMO7-223	ENST00000533299	CYP4F30P	Q9H0H9	118 aa		0.8	□□□□□ -2.28
LMO7-223	ENST00000533299	LOC110117498	A0A087WWA1	95 aa		0.79	□□□□□ -2.28
LMO7-223	ENST00000533299	LOC101927531	A0A1B0GV80	90 aa		0.79	□□□□□ -2.28
LMO7-223	ENST00000533299	SPINK7	P58062	85 aa		0.79	□□□□□ -2.28
LMO7-223	ENST00000533299	KRTAP8-1	Q8IUC2	63 aa		0.78	□□□□□ -2.28
LMO7-223	ENST00000533299	MUC16	Q8WXI7	14507 aa		0.78	□□□□□ -2.28
LMO7-223	ENST00000533299		A0A087WSZ3	146 aa		0.78	□□□□□ -2.29
LMO7-223	ENST00000533299	PDE6G	P18545	87 aa		0.78	□□□□□ -2.29
LMO7-223	ENST00000533299	CSAG1	Q6PB30	78 aa		0.78	□□□□□ -2.29
LMO7-223	ENST00000533299	LINC00575	Q6W349	94 aa		0.78	□□□□□ -2.29
LMO7-223	ENST00000533299		Q6ZQY7	126 aa		0.78	□□□□□ -2.29
LMO7-223	ENST00000533299	LINC00208	Q96KT6	92 aa		0.78	□□□□□ -2.29
LMO7-223	ENST00000533299	SPRR1B	P22528	89 aa		0.77	□□□□□ -2.29
LMO7-223	ENST00000533299	COX7B	P24311	80 aa		0.77	□□□□□ -2.29
LMO7-223	ENST00000533299	MT4	P47944	62 aa		0.77	□□□□□ -2.29
LMO7-223	ENST00000533299	COX17	Q14061	63 aa		0.77	□□□□□ -2.29
LMO7-223	ENST00000533299	CASC2	Q6XLA1	102 aa		0.77	□□□□□ -2.29
LMO7-223	ENST00000533299	LINC01558	Q9Y6Z2	57 aa		0.77	□□□□□ -2.29
LMO7-223	ENST00000533299		K7EQZ3	153 aa		0.76	□□□□□ -2.29
LMO7-223	ENST00000533299	INE1	O15225	51 aa		0.76	□□□□□ -2.29
LMO7-223	ENST00000533299	ELOF1	P60002	83 aa	Known RBP	0.76	□□□□□ -2.29
LMO7-223	ENST00000533299	KRTAP19-8	Q3LI54	63 aa		0.75	□□□□□ -2.29
LMO7-223	ENST00000533299	WFDC13	Q8IUB5	93 aa		0.75	□□□□□ -2.29
LMO7-223	ENST00000533299		H0Y9P7	68 aa		0.75	□□□□□ -2.29
LMO7-223	ENST00000533299	NDUFB1	O75438	58 aa		0.74	□□□□□ -2.29
LMO7-223	ENST00000533299	SPATA8	Q6RVD6	105 aa		0.73	□□□□□ -2.29
LMO7-223	ENST00000533299	IGLV5-48	A0A075B6I7	105 aa		0.73	□□□□□ -2.29
LMO7-223	ENST00000533299	SPRR2G	Q9BYE4	73 aa		0.73	□□□□□ -2.29
LMO7-223	ENST00000533299	CRIPT	Q9P021	101 aa		0.73	□□□□□ -2.29
LMO7-223	ENST00000533299	MT1X	P80297	61 aa		0.72	□□□□□ -2.29
LMO7-223	ENST00000533299	H1FX-AS1	Q4G0G2	97 aa		0.72	□□□□□ -2.29
LMO7-223	ENST00000533299	LINC00472	Q9H8W2	130 aa		0.72	□□□□□ -2.29
LMO7-223	ENST00000533299	MMP24-AS1	A0A0U1RRL7	71 aa		0.71	□□□□□ -2.3
LMO7-223	ENST00000533299		A0A1B0GU69	56 aa		0.7	□□□□□ -2.3
LMO7-223	ENST00000533299	UQCR11	O14957	56 aa		0.7	□□□□□ -2.3
LMO7-223	ENST00000533299		H0YAA0	97 aa		0.69	□□□□□ -2.3
LMO7-223	ENST00000533299	DMAC1	Q96GE9	116 aa		0.69	□□□□□ -2.3
LMO7-223	ENST00000533299	SYNE1	Q8NF91	8797 aa	Known RBP	0.69	□□□□□ -2.3
LMO7-223	ENST00000533299	ACYP2	P14621	99 aa		0.68	□□□□□ -2.3
LMO7-223	ENST00000533299	C10orf95	Q9H7T3	257 aa		0.68	□□□□□ -2.3
LMO7-223	ENST00000533299	MRPL34	Q9BQ48	92 aa	Known RBP	0.67	□□□□□ -2.3
LMO7-223	ENST00000533299	TP53AIP1	Q9HCN2	124 aa		0.67	□□□□□ -2.3
LMO7-223	ENST00000533299	PLAC4	Q8WY50	150 aa		0.66	□□□□□ -2.3
LMO7-223	ENST00000533299		S4R3F8	94 aa		0.66	□□□□□ -2.3
LMO7-223	ENST00000533299	KRTAP19-3	Q7Z4W3	81 aa		0.66	□□□□□ -2.3
LMO7-223	ENST00000533299	KRTAP20-2	Q3LI61	65 aa		0.65	□□□□□ -2.31
LMO7-223	ENST00000533299	KRTAP19-7	Q3SYF9	63 aa		0.65	□□□□□ -2.31
LMO7-223	ENST00000533299	MT1E	P04732	61 aa		0.64	□□□□□ -2.31
LMO7-223	ENST00000533299	MT1M	Q8N339	61 aa		0.62	□□□□□ -2.31
LMO7-223	ENST00000533299		A0A0D9SG42	100 aa		0.61	□□□□□ -2.31
LMO7-223	ENST00000533299	MT1G	P13640	62 aa		0.61	□□□□□ -2.31
LMO7-223	ENST00000533299		M0QZ58	72 aa		0.61	□□□□□ -2.31
LMO7-223	ENST00000533299	KRTAP19-5	Q3LI72	72 aa		0.61	□□□□□ -2.31
LMO7-223	ENST00000533299	MT1L	Q93083	61 aa		0.59	□□□□□ -2.32
LMO7-223	ENST00000533299	KRTAP6-1	Q3LI64	71 aa		0.53	□□□□□ -2.32
LMO7-223	ENST00000533299	KRTAP6-2	Q3LI66	62 aa		0.53	□□□□□ -2.32
LMO7-223	ENST00000533299	MT1A	P04731	61 aa		0.48	□□□□□ -2.33
LMO7-223	ENST00000533299	PHGR1	C9JFL3	82 aa		0.48	□□□□□ -2.33
LMO7-223	ENST00000533299	TNP1	P09430	55 aa		0.47	□□□□□ -2.33
LMO7-223	ENST00000533299	KRTAP21-1	Q3LI58	79 aa		0.41	□□□□□ -2.34
LMO7-223	ENST00000533299	PRM1	P04553	51 aa		0.37	□□□□□ -2.35

Retrieved 78 of 20,778 RNA–protein pairs in 36.4 ms