RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 SPRR2GQ9BYE4 73 aa3.11□□□□□ -1.91
TRIM53CP-201ENST00000531490 CDC42SE1Q9NRR8 79 aa3.11□□□□□ -1.91
TRIM53CP-201ENST00000531490 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
TRIM53CP-201ENST00000531490 LCE3AQ5TA76 89 aa3.09□□□□□ -1.92
TRIM53CP-201ENST00000531490 KRTAP19-8Q3LI54 63 aa3.08□□□□□ -1.92
TRIM53CP-201ENST00000531490 A0A1B0GU33 70 aa3.07□□□□□ -1.92
TRIM53CP-201ENST00000531490 MIR22HGQ0VDD5 57 aa3.07□□□□□ -1.92
TRIM53CP-201ENST00000531490 SPATA8Q6RVD6 105 aa3.07□□□□□ -1.92
TRIM53CP-201ENST00000531490 SPRR2EP22531 72 aa3.05□□□□□ -1.92
TRIM53CP-201ENST00000531490 SPRR2BP35325 72 aa3.05□□□□□ -1.92
TRIM53CP-201ENST00000531490 SPRR2AP35326 72 aa3.05□□□□□ -1.92
TRIM53CP-201ENST00000531490 H0YAA0 97 aa3.04□□□□□ -1.92
TRIM53CP-201ENST00000531490 ADM2Q7Z4H4 148 aa3.04□□□□□ -1.92
TRIM53CP-201ENST00000531490 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
TRIM53CP-201ENST00000531490 KRTAP2-1Q9BYU5 128 aa3.03□□□□□ -1.92
TRIM53CP-201ENST00000531490 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
TRIM53CP-201ENST00000531490 CRIPTQ9P021 101 aa3.02□□□□□ -1.93
TRIM53CP-201ENST00000531490 P0C880 135 aa3.01□□□□□ -1.93
TRIM53CP-201ENST00000531490 KTN1-AS1Q86SY8 53 aa3□□□□□ -1.93
TRIM53CP-201ENST00000531490 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
TRIM53CP-201ENST00000531490 K7ERS5 55 aa3□□□□□ -1.93
TRIM53CP-201ENST00000531490 M0QZ58 72 aa2.99□□□□□ -1.93
TRIM53CP-201ENST00000531490 SPRR2DP22532 72 aa2.94□□□□□ -1.94
TRIM53CP-201ENST00000531490 R4GN34 69 aa2.94□□□□□ -1.94
TRIM53CP-201ENST00000531490 MT1XP80297 61 aa2.92□□□□□ -1.94
TRIM53CP-201ENST00000531490 LINC01554Q52M75 96 aa2.91□□□□□ -1.94
TRIM53CP-201ENST00000531490 KRTAP8-1Q8IUC2 63 aa2.91□□□□□ -1.94
TRIM53CP-201ENST00000531490 PLAC4Q8WY50 150 aa2.9□□□□□ -1.94
TRIM53CP-201ENST00000531490 KRTAP13-4Q3LI77 160 aa2.88□□□□□ -1.95
TRIM53CP-201ENST00000531490 A0A0D9SG42 100 aa2.87□□□□□ -1.95
TRIM53CP-201ENST00000531490 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
TRIM53CP-201ENST00000531490 SPINT4Q6UDR6 99 aa2.85□□□□□ -1.95
TRIM53CP-201ENST00000531490 PRO2289Q9P1D8 64 aa2.85□□□□□ -1.95
TRIM53CP-201ENST00000531490 KRTAP12-1P59990 96 aa2.83□□□□□ -1.96
TRIM53CP-201ENST00000531490 DSTQ03001 7570 aaKnown RBP2.83□□□□□ -1.96
TRIM53CP-201ENST00000531490 ROMO1P60602 79 aa2.81□□□□□ -1.96
TRIM53CP-201ENST00000531490 CAMK2N1Q7Z7J9 78 aa2.74□□□□□ -1.97
TRIM53CP-201ENST00000531490 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
TRIM53CP-201ENST00000531490 LUZP6Q538Z0 58 aa2.72□□□□□ -1.97
TRIM53CP-201ENST00000531490 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
TRIM53CP-201ENST00000531490 KRTAP25-1Q3LHN0 102 aa2.71□□□□□ -1.98
TRIM53CP-201ENST00000531490 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
TRIM53CP-201ENST00000531490 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
TRIM53CP-201ENST00000531490 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
TRIM53CP-201ENST00000531490 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
TRIM53CP-201ENST00000531490 C10orf95Q9H7T3 257 aa2.66□□□□□ -1.98
TRIM53CP-201ENST00000531490 TNP1P09430 55 aa2.64□□□□□ -1.99
TRIM53CP-201ENST00000531490 PP632Q6XCG6 107 aa2.64□□□□□ -1.99
TRIM53CP-201ENST00000531490 MT4P47944 62 aa2.63□□□□□ -1.99
TRIM53CP-201ENST00000531490 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
TRIM53CP-201ENST00000531490 KRTAP19-7Q3SYF9 63 aa2.61□□□□□ -1.99
TRIM53CP-201ENST00000531490 MT1EP04732 61 aa2.57□□□□□ -2
TRIM53CP-201ENST00000531490 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
TRIM53CP-201ENST00000531490 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
TRIM53CP-201ENST00000531490 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
TRIM53CP-201ENST00000531490 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
TRIM53CP-201ENST00000531490 MT1GP13640 62 aa2.48□□□□□ -2.01
TRIM53CP-201ENST00000531490 MT1LQ93083 61 aa2.47□□□□□ -2.01
TRIM53CP-201ENST00000531490 MT1MQ8N339 61 aa2.45□□□□□ -2.02
TRIM53CP-201ENST00000531490 KRTAP12-3P60328 96 aa2.4□□□□□ -2.02
TRIM53CP-201ENST00000531490 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
TRIM53CP-201ENST00000531490 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
TRIM53CP-201ENST00000531490 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
TRIM53CP-201ENST00000531490 SYNE1Q8NF91 8797 aaKnown RBP2.27□□□□□ -2.05
TRIM53CP-201ENST00000531490 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
TRIM53CP-201ENST00000531490 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
TRIM53CP-201ENST00000531490 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
TRIM53CP-201ENST00000531490 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
TRIM53CP-201ENST00000531490 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
TRIM53CP-201ENST00000531490 MT1AP04731 61 aa2.08□□□□□ -2.08
TRIM53CP-201ENST00000531490 INE1O15225 51 aa2.07□□□□□ -2.08
TRIM53CP-201ENST00000531490 KRTAP6-2Q3LI66 62 aa2.01□□□□□ -2.09
TRIM53CP-201ENST00000531490 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
TRIM53CP-201ENST00000531490 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
TRIM53CP-201ENST00000531490 PRM1P04553 51 aa1.44□□□□□ -2.18
TRIM53CP-201ENST00000531490 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
TRIM53CP-201ENST00000531490 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 53.1 ms