RNA–Protein interactions for RNA: ENST00000529970.5

ARHGEF12-208, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 2

Gene ARHGEF12, Length 3,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-208ENST00000529970 KRTAP9-9Q9BYP9 154 aa1.88□□□□□ -2.11
ARHGEF12-208ENST00000529970 PLAC4Q8WY50 150 aa1.88□□□□□ -2.11
ARHGEF12-208ENST00000529970 SPRR2FQ96RM1 72 aa1.86□□□□□ -2.11
ARHGEF12-208ENST00000529970 KRTAP10-5P60370 271 aa1.85□□□□□ -2.11
ARHGEF12-208ENST00000529970 SPRR2DP22532 72 aa1.85□□□□□ -2.11
ARHGEF12-208ENST00000529970 INE1O15225 51 aa1.84□□□□□ -2.11
ARHGEF12-208ENST00000529970 LCE1FQ5T754 118 aa1.84□□□□□ -2.11
ARHGEF12-208ENST00000529970 KRTAP8-1Q8IUC2 63 aa1.81□□□□□ -2.12
ARHGEF12-208ENST00000529970 KRTAP19-8Q3LI54 63 aa1.8□□□□□ -2.12
ARHGEF12-208ENST00000529970 MT1BP07438 61 aa1.79□□□□□ -2.12
ARHGEF12-208ENST00000529970 LCE3BQ5TA77 95 aa1.79□□□□□ -2.12
ARHGEF12-208ENST00000529970 KMT2DO14686 5537 aa1.79□□□□□ -2.12
ARHGEF12-208ENST00000529970 LCE1AQ5T7P2 110 aa1.78□□□□□ -2.12
ARHGEF12-208ENST00000529970 SPRR5A0A1B0GTR4 108 aa1.78□□□□□ -2.13
ARHGEF12-208ENST00000529970 TNP1P09430 55 aa1.78□□□□□ -2.13
ARHGEF12-208ENST00000529970 SPRR2GQ9BYE4 73 aa1.78□□□□□ -2.13
ARHGEF12-208ENST00000529970 MUC12Q9UKN1 5478 aa1.77□□□□□ -2.13
ARHGEF12-208ENST00000529970 MDN1Q9NU22 5596 aa1.76□□□□□ -2.13
ARHGEF12-208ENST00000529970 LCE3CQ5T5A8 94 aa1.75□□□□□ -2.13
ARHGEF12-208ENST00000529970 KRTAP4-8Q9BYQ9 185 aa1.73□□□□□ -2.13
ARHGEF12-208ENST00000529970 DSTQ03001 7570 aaKnown RBP1.69□□□□□ -2.14
ARHGEF12-208ENST00000529970 LCE1EQ5T753 118 aa1.66□□□□□ -2.14
ARHGEF12-208ENST00000529970 KRTAP4-9Q9BYQ8 210 aa1.66□□□□□ -2.14
ARHGEF12-208ENST00000529970 LCE3AQ5TA76 89 aa1.65□□□□□ -2.15
ARHGEF12-208ENST00000529970 LCE3EQ5T5B0 92 aa1.63□□□□□ -2.15
ARHGEF12-208ENST00000529970 MT3P25713 68 aa1.63□□□□□ -2.15
ARHGEF12-208ENST00000529970 KRTAP4-8A0A0G2JLE6 195 aa1.63□□□□□ -2.15
ARHGEF12-208ENST00000529970 KRTAP4-12Q9BQ66 201 aa1.63□□□□□ -2.15
ARHGEF12-208ENST00000529970 MT1XP80297 61 aa1.62□□□□□ -2.15
ARHGEF12-208ENST00000529970 LCE1DQ5T752 114 aa1.61□□□□□ -2.15
ARHGEF12-208ENST00000529970 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
ARHGEF12-208ENST00000529970 KRTAP10-12P60413 245 aa1.59□□□□□ -2.15
ARHGEF12-208ENST00000529970 MT4P47944 62 aa1.59□□□□□ -2.15
ARHGEF12-208ENST00000529970 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
ARHGEF12-208ENST00000529970 KRTAP4-7Q9BYR0 210 aa1.58□□□□□ -2.16
ARHGEF12-208ENST00000529970 KRTAP12-3P60328 96 aa1.57□□□□□ -2.16
ARHGEF12-208ENST00000529970 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
ARHGEF12-208ENST00000529970 KRTAP10-7P60409 375 aaPredicted RBP1.54□□□□□ -2.16
ARHGEF12-208ENST00000529970 KRTAP19-3Q7Z4W3 81 aa1.54□□□□□ -2.16
ARHGEF12-208ENST00000529970 KRTAP5-3Q6L8H2 238 aa1.53□□□□□ -2.16
ARHGEF12-208ENST00000529970 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
ARHGEF12-208ENST00000529970 KRTAP4-2Q9BYR5 136 aa1.53□□□□□ -2.17
ARHGEF12-208ENST00000529970 MT1GP13640 62 aa1.51□□□□□ -2.17
ARHGEF12-208ENST00000529970 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
ARHGEF12-208ENST00000529970 KRTAP19-5Q3LI72 72 aa1.49□□□□□ -2.17
ARHGEF12-208ENST00000529970 MT1EP04732 61 aa1.48□□□□□ -2.17
ARHGEF12-208ENST00000529970 KRTAP5-4Q6L8H1 288 aa1.48□□□□□ -2.17
ARHGEF12-208ENST00000529970 AHNAKQ09666 5890 aaKnown RBP1.47□□□□□ -2.17
ARHGEF12-208ENST00000529970 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
ARHGEF12-208ENST00000529970 KRTAP19-7Q3SYF9 63 aa1.44□□□□□ -2.18
ARHGEF12-208ENST00000529970 MT1MQ8N339 61 aa1.43□□□□□ -2.18
ARHGEF12-208ENST00000529970 KRTAP20-2Q3LI61 65 aa1.42□□□□□ -2.18
ARHGEF12-208ENST00000529970 KRTAP4-11Q9BYQ6 195 aa1.42□□□□□ -2.18
ARHGEF12-208ENST00000529970 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
ARHGEF12-208ENST00000529970 MT1LQ93083 61 aa1.37□□□□□ -2.19
ARHGEF12-208ENST00000529970 OBSCNQ5VST9 7968 aa1.37□□□□□ -2.19
ARHGEF12-208ENST00000529970 KRTAP9-6A8MVA2 160 aa1.37□□□□□ -2.19
ARHGEF12-208ENST00000529970 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
ARHGEF12-208ENST00000529970 MUC5ACP98088 5654 aa1.34□□□□□ -2.2
ARHGEF12-208ENST00000529970 KRTAP4-3Q9BYR4 195 aa1.32□□□□□ -2.2
ARHGEF12-208ENST00000529970 SYNE1Q8NF91 8797 aaKnown RBP1.32□□□□□ -2.2
ARHGEF12-208ENST00000529970 KRTAP5-8O75690 187 aa1.3□□□□□ -2.2
ARHGEF12-208ENST00000529970 KRTAP5-5Q701N2 237 aaPredicted RBP1.27□□□□□ -2.21
ARHGEF12-208ENST00000529970 KRTAP5-2Q701N4 177 aa1.24□□□□□ -2.21
ARHGEF12-208ENST00000529970 MT1AP04731 61 aa1.21□□□□□ -2.22
ARHGEF12-208ENST00000529970 KRTAP6-2Q3LI66 62 aa1.17□□□□□ -2.22
ARHGEF12-208ENST00000529970 KRTAP6-1Q3LI64 71 aa1.16□□□□□ -2.22
ARHGEF12-208ENST00000529970 KRTAP5-1Q6L8H4 278 aa1.13□□□□□ -2.23
ARHGEF12-208ENST00000529970 KRTAP4-4Q9BYR3 166 aa1.11□□□□□ -2.23
ARHGEF12-208ENST00000529970 PRM1P04553 51 aa1.09□□□□□ -2.23
ARHGEF12-208ENST00000529970 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.06□□□□□ -2.24
ARHGEF12-208ENST00000529970 LCE1CQ5T751 118 aa1.05□□□□□ -2.24
ARHGEF12-208ENST00000529970 LCE1BQ5T7P3 118 aa1.05□□□□□ -2.24
ARHGEF12-208ENST00000529970 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
ARHGEF12-208ENST00000529970 KRTAP5-11Q6L8G4 156 aa0.97□□□□□ -2.25
ARHGEF12-208ENST00000529970 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
ARHGEF12-208ENST00000529970 KRTAP21-2Q3LI59 83 aa0.74□□□□□ -2.29
ARHGEF12-208ENST00000529970 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms