RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 P0C880 135 aa2.74□□□□□ -1.97
CHRNA6-202ENST00000529467 KRTAP25-1Q3LHN0 102 aa2.74□□□□□ -1.97
CHRNA6-202ENST00000529467 R4GN34 69 aa2.74□□□□□ -1.97
CHRNA6-202ENST00000529467 KMT2DO14686 5537 aa2.74□□□□□ -1.97
CHRNA6-202ENST00000529467 KRTAP2-2Q9BYT5 123 aa2.73□□□□□ -1.97
CHRNA6-202ENST00000529467 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
CHRNA6-202ENST00000529467 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
CHRNA6-202ENST00000529467 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
CHRNA6-202ENST00000529467 SPRR2EP22531 72 aa2.66□□□□□ -1.98
CHRNA6-202ENST00000529467 SPRR2BP35325 72 aa2.66□□□□□ -1.98
CHRNA6-202ENST00000529467 SPRR2AP35326 72 aa2.66□□□□□ -1.98
CHRNA6-202ENST00000529467 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
CHRNA6-202ENST00000529467 SPRR2FQ96RM1 72 aa2.66□□□□□ -1.98
CHRNA6-202ENST00000529467 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
CHRNA6-202ENST00000529467 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
CHRNA6-202ENST00000529467 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
CHRNA6-202ENST00000529467 KRTAP12-1P59990 96 aa2.63□□□□□ -1.99
CHRNA6-202ENST00000529467 A0A0D9SG42 100 aa2.62□□□□□ -1.99
CHRNA6-202ENST00000529467 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
CHRNA6-202ENST00000529467 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
CHRNA6-202ENST00000529467 MT1XP80297 61 aa2.6□□□□□ -1.99
CHRNA6-202ENST00000529467 SPINT4Q6UDR6 99 aa2.6□□□□□ -1.99
CHRNA6-202ENST00000529467 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
CHRNA6-202ENST00000529467 KRTAP12-2P59991 146 aa2.59□□□□□ -1.99
CHRNA6-202ENST00000529467 KRTAP8-1Q8IUC2 63 aa2.59□□□□□ -1.99
CHRNA6-202ENST00000529467 PRO2289Q9P1D8 64 aa2.58□□□□□ -2
CHRNA6-202ENST00000529467 SPRR2DP22532 72 aa2.57□□□□□ -2
CHRNA6-202ENST00000529467 PLAC4Q8WY50 150 aa2.57□□□□□ -2
CHRNA6-202ENST00000529467 CAMK2N1Q7Z7J9 78 aa2.56□□□□□ -2
CHRNA6-202ENST00000529467 PP632Q6XCG6 107 aa2.48□□□□□ -2.01
CHRNA6-202ENST00000529467 TNP1P09430 55 aa2.47□□□□□ -2.01
CHRNA6-202ENST00000529467 KRTAP10-12P60413 245 aa2.47□□□□□ -2.01
CHRNA6-202ENST00000529467 MT3P25713 68 aa2.46□□□□□ -2.02
CHRNA6-202ENST00000529467 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
CHRNA6-202ENST00000529467 DSTQ03001 7570 aaKnown RBP2.33□□□□□ -2.04
CHRNA6-202ENST00000529467 KRTAP19-7Q3SYF9 63 aa2.33□□□□□ -2.04
CHRNA6-202ENST00000529467 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
CHRNA6-202ENST00000529467 MT1EP04732 61 aa2.31□□□□□ -2.04
CHRNA6-202ENST00000529467 KRTAP9-6A8MVA2 160 aa2.29□□□□□ -2.04
CHRNA6-202ENST00000529467 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
CHRNA6-202ENST00000529467 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
CHRNA6-202ENST00000529467 MT4P47944 62 aa2.27□□□□□ -2.05
CHRNA6-202ENST00000529467 MT1GP13640 62 aa2.26□□□□□ -2.05
CHRNA6-202ENST00000529467 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
CHRNA6-202ENST00000529467 INE1O15225 51 aa2.25□□□□□ -2.05
CHRNA6-202ENST00000529467 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
CHRNA6-202ENST00000529467 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
CHRNA6-202ENST00000529467 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
CHRNA6-202ENST00000529467 KRTAP19-5Q3LI72 72 aa2.22□□□□□ -2.05
CHRNA6-202ENST00000529467 MT1MQ8N339 61 aa2.21□□□□□ -2.06
CHRNA6-202ENST00000529467 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
CHRNA6-202ENST00000529467 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
CHRNA6-202ENST00000529467 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
CHRNA6-202ENST00000529467 MT1LQ93083 61 aa2.18□□□□□ -2.06
CHRNA6-202ENST00000529467 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
CHRNA6-202ENST00000529467 SPRR5A0A1B0GTR4 108 aa2.15□□□□□ -2.07
CHRNA6-202ENST00000529467 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
CHRNA6-202ENST00000529467 LCE3CQ5T5A8 94 aa2.08□□□□□ -2.08
CHRNA6-202ENST00000529467 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
CHRNA6-202ENST00000529467 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
CHRNA6-202ENST00000529467 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
CHRNA6-202ENST00000529467 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
CHRNA6-202ENST00000529467 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
CHRNA6-202ENST00000529467 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
CHRNA6-202ENST00000529467 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
CHRNA6-202ENST00000529467 KRTAP6-1Q3LI64 71 aa1.86□□□□□ -2.11
CHRNA6-202ENST00000529467 MT1AP04731 61 aa1.85□□□□□ -2.11
CHRNA6-202ENST00000529467 LCE3EQ5T5B0 92 aa1.84□□□□□ -2.11
CHRNA6-202ENST00000529467 KRTAP6-2Q3LI66 62 aa1.8□□□□□ -2.12
CHRNA6-202ENST00000529467 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
CHRNA6-202ENST00000529467 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
CHRNA6-202ENST00000529467 LCE3DQ9BYE3 92 aa1.58□□□□□ -2.16
CHRNA6-202ENST00000529467 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
CHRNA6-202ENST00000529467 PRM1P04553 51 aa1.31□□□□□ -2.2
CHRNA6-202ENST00000529467 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
CHRNA6-202ENST00000529467 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
CHRNA6-202ENST00000529467 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
CHRNA6-202ENST00000529467 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 46.5 ms