RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 KRTAP19-6Q3LI70 58 aa3.33□□□□□ -1.88
C11orf88-203ENST00000529167 KRTAP9-3Q9BYQ3 159 aa3.29□□□□□ -1.88
C11orf88-203ENST00000529167 MT2AP02795 61 aa3.27□□□□□ -1.89
C11orf88-203ENST00000529167 MT1FP04733 61 aa3.23□□□□□ -1.89
C11orf88-203ENST00000529167 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
C11orf88-203ENST00000529167 KRTAP10-10P60014 251 aa3.2□□□□□ -1.9
C11orf88-203ENST00000529167 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
C11orf88-203ENST00000529167 LCE3AQ5TA76 89 aa3.18□□□□□ -1.9
C11orf88-203ENST00000529167 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
C11orf88-203ENST00000529167 KRTAP2-3P0C7H8 128 aa3.16□□□□□ -1.9
C11orf88-203ENST00000529167 KRTAP2-4Q9BYR9 128 aa3.16□□□□□ -1.9
C11orf88-203ENST00000529167 KRTAP10-12P60413 245 aa3.15□□□□□ -1.9
C11orf88-203ENST00000529167 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
C11orf88-203ENST00000529167 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
C11orf88-203ENST00000529167 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
C11orf88-203ENST00000529167 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
C11orf88-203ENST00000529167 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
C11orf88-203ENST00000529167 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
C11orf88-203ENST00000529167 KRTAP2-1Q9BYU5 128 aa3.03□□□□□ -1.92
C11orf88-203ENST00000529167 SPRR2GQ9BYE4 73 aa3.02□□□□□ -1.93
C11orf88-203ENST00000529167 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
C11orf88-203ENST00000529167 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
C11orf88-203ENST00000529167 KMT2DO14686 5537 aa3.02□□□□□ -1.93
C11orf88-203ENST00000529167 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
C11orf88-203ENST00000529167 MT3P25713 68 aa2.94□□□□□ -1.94
C11orf88-203ENST00000529167 SPRR2EP22531 72 aa2.91□□□□□ -1.94
C11orf88-203ENST00000529167 SPRR2BP35325 72 aa2.91□□□□□ -1.94
C11orf88-203ENST00000529167 SPRR2AP35326 72 aa2.91□□□□□ -1.94
C11orf88-203ENST00000529167 LCE3CQ5T5A8 94 aa2.9□□□□□ -1.95
C11orf88-203ENST00000529167 MT1BP07438 61 aa2.88□□□□□ -1.95
C11orf88-203ENST00000529167 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
C11orf88-203ENST00000529167 KRTAP19-8Q3LI54 63 aa2.84□□□□□ -1.95
C11orf88-203ENST00000529167 SPRR2FQ96RM1 72 aa2.84□□□□□ -1.95
C11orf88-203ENST00000529167 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
C11orf88-203ENST00000529167 SPRR2DP22532 72 aa2.82□□□□□ -1.96
C11orf88-203ENST00000529167 MT1XP80297 61 aa2.82□□□□□ -1.96
C11orf88-203ENST00000529167 KRTAP19-5Q3LI72 72 aa2.74□□□□□ -1.97
C11orf88-203ENST00000529167 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
C11orf88-203ENST00000529167 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
C11orf88-203ENST00000529167 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
C11orf88-203ENST00000529167 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
C11orf88-203ENST00000529167 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
C11orf88-203ENST00000529167 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
C11orf88-203ENST00000529167 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
C11orf88-203ENST00000529167 DSTQ03001 7570 aaKnown RBP2.6□□□□□ -1.99
C11orf88-203ENST00000529167 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
C11orf88-203ENST00000529167 KRTAP19-7Q3SYF9 63 aa2.52□□□□□ -2.01
C11orf88-203ENST00000529167 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
C11orf88-203ENST00000529167 MT1LQ93083 61 aa2.48□□□□□ -2.01
C11orf88-203ENST00000529167 MT4P47944 62 aa2.47□□□□□ -2.01
C11orf88-203ENST00000529167 MT1EP04732 61 aa2.46□□□□□ -2.02
C11orf88-203ENST00000529167 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
C11orf88-203ENST00000529167 PRM1P04553 51 aa2.42□□□□□ -2.02
C11orf88-203ENST00000529167 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
C11orf88-203ENST00000529167 SYNE1Q8NF91 8797 aaKnown RBP2.42□□□□□ -2.02
C11orf88-203ENST00000529167 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
C11orf88-203ENST00000529167 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
C11orf88-203ENST00000529167 MT1AP04731 61 aa2.39□□□□□ -2.03
C11orf88-203ENST00000529167 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
C11orf88-203ENST00000529167 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
C11orf88-203ENST00000529167 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
C11orf88-203ENST00000529167 MT1GP13640 62 aa2.3□□□□□ -2.04
C11orf88-203ENST00000529167 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
C11orf88-203ENST00000529167 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
C11orf88-203ENST00000529167 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
C11orf88-203ENST00000529167 MT1MQ8N339 61 aa2.24□□□□□ -2.05
C11orf88-203ENST00000529167 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
C11orf88-203ENST00000529167 KRTAP6-2Q3LI66 62 aa2.19□□□□□ -2.06
C11orf88-203ENST00000529167 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
C11orf88-203ENST00000529167 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.07
C11orf88-203ENST00000529167 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
C11orf88-203ENST00000529167 LCE1CQ5T751 118 aa1.79□□□□□ -2.12
C11orf88-203ENST00000529167 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
C11orf88-203ENST00000529167 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
C11orf88-203ENST00000529167 PHGR1C9JFL3 82 aa1.53□□□□□ -2.17
C11orf88-203ENST00000529167 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
C11orf88-203ENST00000529167 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 77.5 ms