RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 UQCR11O14957 56 aa4.75□□□□□ -1.65
CCDC90B-210ENST00000528149 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
CCDC90B-210ENST00000528149 KRTAP12-2P59991 146 aa4.74□□□□□ -1.65
CCDC90B-210ENST00000528149 CAMK2N1Q7Z7J9 78 aa4.74□□□□□ -1.65
CCDC90B-210ENST00000528149 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
CCDC90B-210ENST00000528149 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
CCDC90B-210ENST00000528149 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
CCDC90B-210ENST00000528149 A6NED7 52 aa4.65□□□□□ -1.67
CCDC90B-210ENST00000528149 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.67
CCDC90B-210ENST00000528149 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
CCDC90B-210ENST00000528149 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
CCDC90B-210ENST00000528149 HMCN1Q96RW7 5635 aa4.54□□□□□ -1.68
CCDC90B-210ENST00000528149 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
CCDC90B-210ENST00000528149 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
CCDC90B-210ENST00000528149 K7ERS5 55 aa4.52□□□□□ -1.69
CCDC90B-210ENST00000528149 AHNAK2Q8IVF2 5795 aa4.5□□□□□ -1.69
CCDC90B-210ENST00000528149 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
CCDC90B-210ENST00000528149 TNP1P09430 55 aa4.43□□□□□ -1.7
CCDC90B-210ENST00000528149 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
CCDC90B-210ENST00000528149 SVIPQ8NHG7 77 aa4.42□□□□□ -1.7
CCDC90B-210ENST00000528149 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
CCDC90B-210ENST00000528149 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
CCDC90B-210ENST00000528149 PRO0628Q9UI54 55 aa4.33□□□□□ -1.72
CCDC90B-210ENST00000528149 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
CCDC90B-210ENST00000528149 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
CCDC90B-210ENST00000528149 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
CCDC90B-210ENST00000528149 MT4P47944 62 aa4.29□□□□□ -1.72
CCDC90B-210ENST00000528149 ROMO1P60602 79 aa4.29□□□□□ -1.72
CCDC90B-210ENST00000528149 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
CCDC90B-210ENST00000528149 MT1EP04732 61 aa4.26□□□□□ -1.73
CCDC90B-210ENST00000528149 SPRR5A0A1B0GTR4 108 aa4.23□□□□□ -1.73
CCDC90B-210ENST00000528149 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
CCDC90B-210ENST00000528149 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
CCDC90B-210ENST00000528149 MT1LQ93083 61 aa4.13□□□□□ -1.75
CCDC90B-210ENST00000528149 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
CCDC90B-210ENST00000528149 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
CCDC90B-210ENST00000528149 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
CCDC90B-210ENST00000528149 MT1GP13640 62 aa4.05□□□□□ -1.76
CCDC90B-210ENST00000528149 MT1MQ8N339 61 aa4.05□□□□□ -1.76
CCDC90B-210ENST00000528149 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
CCDC90B-210ENST00000528149 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
CCDC90B-210ENST00000528149 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
CCDC90B-210ENST00000528149 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
CCDC90B-210ENST00000528149 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
CCDC90B-210ENST00000528149 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
CCDC90B-210ENST00000528149 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
CCDC90B-210ENST00000528149 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
CCDC90B-210ENST00000528149 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
CCDC90B-210ENST00000528149 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
CCDC90B-210ENST00000528149 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
CCDC90B-210ENST00000528149 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
CCDC90B-210ENST00000528149 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
CCDC90B-210ENST00000528149 MT3P25713 68 aa3.53□□□□□ -1.84
CCDC90B-210ENST00000528149 MT1AP04731 61 aa3.51□□□□□ -1.85
CCDC90B-210ENST00000528149 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
CCDC90B-210ENST00000528149 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
CCDC90B-210ENST00000528149 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
CCDC90B-210ENST00000528149 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
CCDC90B-210ENST00000528149 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
CCDC90B-210ENST00000528149 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
CCDC90B-210ENST00000528149 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
CCDC90B-210ENST00000528149 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
CCDC90B-210ENST00000528149 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
CCDC90B-210ENST00000528149 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
CCDC90B-210ENST00000528149 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
CCDC90B-210ENST00000528149 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
CCDC90B-210ENST00000528149 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
CCDC90B-210ENST00000528149 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
CCDC90B-210ENST00000528149 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
CCDC90B-210ENST00000528149 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
CCDC90B-210ENST00000528149 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
CCDC90B-210ENST00000528149 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
CCDC90B-210ENST00000528149 INE1O15225 51 aa2.6□□□□□ -1.99
CCDC90B-210ENST00000528149 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
CCDC90B-210ENST00000528149 PRM1P04553 51 aa2.24□□□□□ -2.05
CCDC90B-210ENST00000528149 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
CCDC90B-210ENST00000528149 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
CCDC90B-210ENST00000528149 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms